RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 ERVK-9P63128 1117 aa22.83■■□□□ 1.25
FBXO28-205ENST00000523990 ERVK-24P63145 666 aa22.83■■□□□ 1.25
FBXO28-205ENST00000523990 VPS53Q5VIR6 699 aa22.83■■□□□ 1.25
FBXO28-205ENST00000523990 LBX2Q6XYB7 198 aa22.83■■□□□ 1.25
FBXO28-205ENST00000523990 GPRC5AQ8NFJ5 357 aa22.83■■□□□ 1.25
FBXO28-205ENST00000523990 LPAR1Q92633 364 aa22.83■■□□□ 1.25
FBXO28-205ENST00000523990 RILPL2Q969X0 211 aa22.83■■□□□ 1.25
FBXO28-205ENST00000523990 VCPKMTQ9H867 229 aa22.83■■□□□ 1.25
FBXO28-205ENST00000523990 KANSL2Q9H9L4 492 aa22.83■■□□□ 1.25
FBXO28-205ENST00000523990 EEF2P13639 858 aaKnown RBP22.82■■□□□ 1.24
FBXO28-205ENST00000523990 IRF5Q13568 498 aa22.82■■□□□ 1.24
FBXO28-205ENST00000523990 SLAIN1Q8ND83 568 aa22.82■■□□□ 1.24
FBXO28-205ENST00000523990 PAGR1Q9BTK6 254 aa22.82■■□□□ 1.24
FBXO28-205ENST00000523990 SPDYE16A6NNV3 312 aaPredicted RBP22.82■■□□□ 1.24
FBXO28-205ENST00000523990 PPARAQ07869 468 aa22.82■■□□□ 1.24
FBXO28-205ENST00000523990 NMIQ13287 307 aaPredicted RBP22.82■■□□□ 1.24
FBXO28-205ENST00000523990 MCMDC2Q4G0Z9 681 aa22.82■■□□□ 1.24
FBXO28-205ENST00000523990 ZNF287Q9HBT7 754 aa22.82■■□□□ 1.24
FBXO28-205ENST00000523990 PLIN4Q96Q06 1357 aa22.81■■□□□ 1.24
FBXO28-205ENST00000523990 PRDM1O75626 825 aa22.81■■□□□ 1.24
FBXO28-205ENST00000523990 CNMDO75829 334 aa22.81■■□□□ 1.24
FBXO28-205ENST00000523990 PDE4AP27815 886 aa22.81■■□□□ 1.24
FBXO28-205ENST00000523990 Q3C1V9 767 aa22.81■■□□□ 1.24
FBXO28-205ENST00000523990 TANGO6Q9C0B7 1094 aa22.81■■□□□ 1.24
FBXO28-205ENST00000523990 RABGAP1Q9Y3P9 1069 aa22.81■■□□□ 1.24
FBXO28-205ENST00000523990 MYCP01106 439 aaPredicted RBP22.8■■□□□ 1.24
FBXO28-205ENST00000523990 ATP2B2Q01814 1243 aa22.8■■□□□ 1.24
FBXO28-205ENST00000523990 ZNF589Q86UQ0 364 aaPredicted RBP22.8■■□□□ 1.24
FBXO28-205ENST00000523990 SPICE1Q8N0Z3 855 aa22.8■■□□□ 1.24
FBXO28-205ENST00000523990 PXYLP1Q8TE99 480 aa22.8■■□□□ 1.24
FBXO28-205ENST00000523990 PORCNQ9H237 461 aa22.8■■□□□ 1.24
FBXO28-205ENST00000523990 PDE4DIPQ5VU43 2346 aa22.79■■□□□ 1.24
FBXO28-205ENST00000523990 ZNF236Q9UL36 1845 aa22.79■■□□□ 1.24
FBXO28-205ENST00000523990 IGKV6D-41A0A0C4DH26 115 aa22.79■■□□□ 1.24
FBXO28-205ENST00000523990 WDR46O15213 610 aaKnown RBP22.79■■□□□ 1.24
FBXO28-205ENST00000523990 ADCY3O60266 1144 aa22.79■■□□□ 1.24
FBXO28-205ENST00000523990 SDSP20132 328 aa22.79■■□□□ 1.24
FBXO28-205ENST00000523990 PDE4BQ07343 736 aa22.79■■□□□ 1.24
FBXO28-205ENST00000523990 MTFR1Q15390 333 aa22.79■■□□□ 1.24
FBXO28-205ENST00000523990 TMEM106CQ9BVX2 250 aa22.79■■□□□ 1.24
FBXO28-205ENST00000523990 GJD2Q9UKL4 321 aa22.79■■□□□ 1.24
FBXO28-205ENST00000523990 CCDC171Q6TFL3 1326 aa22.78■■□□□ 1.24
FBXO28-205ENST00000523990 SLC3A2P08195 630 aaKnown RBP22.78■■□□□ 1.24
FBXO28-205ENST00000523990 ELNP15502 786 aa22.78■■□□□ 1.24
FBXO28-205ENST00000523990 MAPK4P31152 587 aa22.78■■□□□ 1.24
FBXO28-205ENST00000523990 COG2Q14746 738 aa22.78■■□□□ 1.24
FBXO28-205ENST00000523990 ZNF444Q8N0Y2 327 aaPredicted RBP22.78■■□□□ 1.24
FBXO28-205ENST00000523990 BTBD7Q9P203 1132 aa22.78■■□□□ 1.24
FBXO28-205ENST00000523990 ZMYM6O95789 1325 aa22.77■■□□□ 1.24
FBXO28-205ENST00000523990 ALX1Q15699 326 aa22.77■■□□□ 1.24
FBXO28-205ENST00000523990 GOPCQ9HD26 462 aa22.77■■□□□ 1.24
FBXO28-205ENST00000523990 NYAP2Q9P242 653 aa22.77■■□□□ 1.24
FBXO28-205ENST00000523990 HSPD1P10809 573 aaKnown RBP22.76■■□□□ 1.23
FBXO28-205ENST00000523990 CEP95Q96GE4 821 aa22.76■■□□□ 1.23
FBXO28-205ENST00000523990 HOXC10Q9NYD6 342 aa22.76■■□□□ 1.23
FBXO28-205ENST00000523990 ANAPC4Q9UJX5 808 aa22.76■■□□□ 1.23
FBXO28-205ENST00000523990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.76■■□□□ 1.23
FBXO28-205ENST00000523990 FLOT1O75955 427 aa22.75■■□□□ 1.23
FBXO28-205ENST00000523990 EN2P19622 333 aaPredicted RBP22.75■■□□□ 1.23
FBXO28-205ENST00000523990 UBXN2AP68543 259 aa22.75■■□□□ 1.23
FBXO28-205ENST00000523990 CCNA1P78396 465 aa22.75■■□□□ 1.23
FBXO28-205ENST00000523990 CTDSPL2Q05D32 466 aa22.75■■□□□ 1.23
FBXO28-205ENST00000523990 GPR142Q7Z601 462 aa22.75■■□□□ 1.23
FBXO28-205ENST00000523990 SOCS4Q8WXH5 440 aa22.75■■□□□ 1.23
FBXO28-205ENST00000523990 BIN2Q9UBW5 565 aaPredicted RBP22.75■■□□□ 1.23
FBXO28-205ENST00000523990 FGAP02671 866 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 INHAP05111 366 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 TSPY3P0CV98 308 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 TSPY8P0CW00 308 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 GSPT1P15170 499 aaKnown RBP22.74■■□□□ 1.23
FBXO28-205ENST00000523990 DSG3P32926 999 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 CCAR1Q8IX12 1150 aaKnown RBP22.74■■□□□ 1.23
FBXO28-205ENST00000523990 NEDD1Q8NHV4 660 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 MTMR4Q9NYA4 1195 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 CCL5P13501 91 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 FAM47AQ5JRC9 791 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 TTC22Q5TAA0 569 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 PLEKHH3Q7Z736 793 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 NUDT12Q9BQG2 462 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 DIAPH3Q9NSV4 1193 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 TACC3Q9Y6A5 838 aa22.74■■□□□ 1.23
FBXO28-205ENST00000523990 ZNFX1Q9P2E3 1918 aaKnown RBP22.73■■□□□ 1.23
FBXO28-205ENST00000523990 HIP1O00291 1037 aa22.73■■□□□ 1.23
FBXO28-205ENST00000523990 MFAP1P55081 439 aaKnown RBP22.73■■□□□ 1.23
FBXO28-205ENST00000523990 TFAP4Q01664 338 aa22.73■■□□□ 1.23
FBXO28-205ENST00000523990 MORN1Q5T089 497 aa22.73■■□□□ 1.23
FBXO28-205ENST00000523990 CWC27Q6UX04 472 aaKnown RBP22.73■■□□□ 1.23
FBXO28-205ENST00000523990 MB21D1Q8N884 522 aa22.73■■□□□ 1.23
FBXO28-205ENST00000523990 USP6NLQ92738 828 aa22.73■■□□□ 1.23
FBXO28-205ENST00000523990 MKL1Q969V6 931 aa22.73■■□□□ 1.23
FBXO28-205ENST00000523990 ATG4CQ96DT6 458 aa22.73■■□□□ 1.23
FBXO28-205ENST00000523990 RAD21O60216 631 aa22.72■■□□□ 1.23
FBXO28-205ENST00000523990 TTLL1O95922 423 aa22.72■■□□□ 1.23
FBXO28-205ENST00000523990 FAM83BQ5T0W9 1011 aa22.72■■□□□ 1.23
FBXO28-205ENST00000523990 SPATC1LQ9H0A9 340 aa22.72■■□□□ 1.23
FBXO28-205ENST00000523990 INCENPQ9NQS7 918 aa22.72■■□□□ 1.23
FBXO28-205ENST00000523990 FBXO28Q9NVF7 368 aa22.72■■□□□ 1.23
FBXO28-205ENST00000523990 CLIP2Q9UDT6 1046 aa22.72■■□□□ 1.23
FBXO28-205ENST00000523990 SYNPO2Q9UMS6 1093 aa22.72■■□□□ 1.23
FBXO28-205ENST00000523990 FRMPD3Q5JV73 1810 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms