RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 DOC2BQ14184 412 aa5.81□□□□□ -1.48
SKP1-212ENST00000523966 MTERF2Q49AM1 385 aa5.81□□□□□ -1.48
SKP1-212ENST00000523966 TDRD10Q5VZ19 366 aaKnown RBP5.81□□□□□ -1.48
SKP1-212ENST00000523966 DNAJB8Q8NHS0 232 aa5.81□□□□□ -1.48
SKP1-212ENST00000523966 RIN3Q8TB24 985 aa5.81□□□□□ -1.48
SKP1-212ENST00000523966 PPP1R13LQ8WUF5 828 aa5.81□□□□□ -1.48
SKP1-212ENST00000523966 ZNF512BQ96KM6 892 aaPredicted RBP5.81□□□□□ -1.48
SKP1-212ENST00000523966 PSMG3-AS1Q96PY0 264 aa5.81□□□□□ -1.48
SKP1-212ENST00000523966 METTL22Q9BUU2 404 aaPredicted RBP5.81□□□□□ -1.48
SKP1-212ENST00000523966 OSBPL1AQ9BXW6 950 aa5.81□□□□□ -1.48
SKP1-212ENST00000523966 TPSG1Q9NRR2 321 aa5.81□□□□□ -1.48
SKP1-212ENST00000523966 SNTG2Q9NY99 539 aa5.81□□□□□ -1.48
SKP1-212ENST00000523966 LRP2BPQ9P2M1 347 aa5.81□□□□□ -1.48
SKP1-212ENST00000523966 ANKRD34BA5PLL1 514 aa5.8□□□□□ -1.48
SKP1-212ENST00000523966 IQCA1LA6NCM1 817 aa5.8□□□□□ -1.48
SKP1-212ENST00000523966 LEFTY1O75610 366 aa5.8□□□□□ -1.48
SKP1-212ENST00000523966 CBX7O95931 251 aa5.8□□□□□ -1.48
SKP1-212ENST00000523966 EOMESO95936 686 aa5.8□□□□□ -1.48
SKP1-212ENST00000523966 KIR3DL1P43629 444 aa5.8□□□□□ -1.48
SKP1-212ENST00000523966 ZNF143P52747 638 aaPredicted RBP5.8□□□□□ -1.48
SKP1-212ENST00000523966 NFIAQ12857 509 aa5.8□□□□□ -1.48
SKP1-212ENST00000523966 RASGRF1Q13972 1273 aa5.8□□□□□ -1.48
SKP1-212ENST00000523966 NOL9Q5SY16 702 aaKnown RBP5.8□□□□□ -1.48
SKP1-212ENST00000523966 NBPF12Q5TAG4 269 aaPredicted RBP5.8□□□□□ -1.48
SKP1-212ENST00000523966 PPP1R14AQ96A00 147 aa5.8□□□□□ -1.48
SKP1-212ENST00000523966 FBXL18Q96ME1 805 aa5.8□□□□□ -1.48
SKP1-212ENST00000523966 DBNDD2Q9BQY9 259 aa5.8□□□□□ -1.48
SKP1-212ENST00000523966 EPN3Q9H201 632 aa5.8□□□□□ -1.48
SKP1-212ENST00000523966 PCDHB12Q9Y5F1 795 aa5.8□□□□□ -1.48
SKP1-212ENST00000523966 FAM155AB1AL88 458 aaPredicted RBP5.79□□□□□ -1.48
SKP1-212ENST00000523966 WDR64B1ANS9 1081 aa5.79□□□□□ -1.48
SKP1-212ENST00000523966 B2RBV5 119 aa5.79□□□□□ -1.48
SKP1-212ENST00000523966 MSTNO14793 375 aa5.79□□□□□ -1.48
SKP1-212ENST00000523966 PPM1BO75688 479 aa5.79□□□□□ -1.48
SKP1-212ENST00000523966 CLSTN1O94985 981 aa5.79□□□□□ -1.48
SKP1-212ENST00000523966 H2AFB1P0C5Y9 115 aa5.79□□□□□ -1.48
SKP1-212ENST00000523966 H2AFB2P0C5Z0 115 aa5.79□□□□□ -1.48
SKP1-212ENST00000523966 AUHQ13825 339 aaKnown RBP5.79□□□□□ -1.48
SKP1-212ENST00000523966 SV2CQ496J9 727 aa5.79□□□□□ -1.48
SKP1-212ENST00000523966 SLC51AQ86UW1 340 aa5.79□□□□□ -1.48
SKP1-212ENST00000523966 ST13P5Q8NFI4 369 aaPredicted RBP5.79□□□□□ -1.48
SKP1-212ENST00000523966 MICAL1Q8TDZ2 1067 aa5.79□□□□□ -1.48
SKP1-212ENST00000523966 PIF1Q9H611 641 aa5.79□□□□□ -1.48
SKP1-212ENST00000523966 SUGT1Q9Y2Z0 365 aa5.79□□□□□ -1.48
SKP1-212ENST00000523966 MSRB2Q9Y3D2 182 aa5.79□□□□□ -1.48
SKP1-212ENST00000523966 TLDC2A0PJX2 215 aa5.78□□□□□ -1.48
SKP1-212ENST00000523966 FAM170BA6NMN3 283 aa5.78□□□□□ -1.48
SKP1-212ENST00000523966 IGF2BP3O00425 579 aaKnown RBP eCLIP5.78□□□□□ -1.48
SKP1-212ENST00000523966 NOP56O00567 594 aaKnown RBP5.78□□□□□ -1.48
SKP1-212ENST00000523966 SMARCA5O60264 1052 aaPredicted RBP5.78□□□□□ -1.48
SKP1-212ENST00000523966 IGLV1-40P01703 118 aa5.78□□□□□ -1.48
SKP1-212ENST00000523966 ITGA4P13612 1032 aa5.78□□□□□ -1.48
SKP1-212ENST00000523966 FSTP19883 344 aa5.78□□□□□ -1.48
SKP1-212ENST00000523966 ADMP35318 185 aa5.78□□□□□ -1.48
SKP1-212ENST00000523966 CLEC16AQ2KHT3 1053 aa5.78□□□□□ -1.48
SKP1-212ENST00000523966 ANKRD39Q53RE8 183 aa5.78□□□□□ -1.48
SKP1-212ENST00000523966 AXDND1Q5T1B0 1012 aaPredicted RBP5.78□□□□□ -1.48
SKP1-212ENST00000523966 ZNF765Q7L2R6 523 aa5.78□□□□□ -1.48
SKP1-212ENST00000523966 C7orf61Q8IZ16 206 aa5.78□□□□□ -1.48
SKP1-212ENST00000523966 IPO9Q96P70 1041 aaKnown RBP5.78□□□□□ -1.48
SKP1-212ENST00000523966 HAUS7Q99871 368 aa5.78□□□□□ -1.48
SKP1-212ENST00000523966 LRRC4CQ9HCJ2 640 aa5.78□□□□□ -1.48
SKP1-212ENST00000523966 LEMD3Q9Y2U8 911 aa5.78□□□□□ -1.48
SKP1-212ENST00000523966 LOC105371045A0A1W2PR82 267 aa5.77□□□□□ -1.49
SKP1-212ENST00000523966 FAM221BA6H8Z2 402 aa5.77□□□□□ -1.49
SKP1-212ENST00000523966 C9IYK1 514 aa5.77□□□□□ -1.49
SKP1-212ENST00000523966 SUSD5O60279 629 aa5.77□□□□□ -1.49
SKP1-212ENST00000523966 SSRP1Q08945 709 aaKnown RBP5.77□□□□□ -1.49
SKP1-212ENST00000523966 RASA3Q14644 834 aa5.77□□□□□ -1.49
SKP1-212ENST00000523966 CPSF6Q16630 551 aaKnown RBP eCLIP5.77□□□□□ -1.49
SKP1-212ENST00000523966 DCAF15Q66K64 600 aa5.77□□□□□ -1.49
SKP1-212ENST00000523966 PPFIBP1Q86W92 1011 aa5.77□□□□□ -1.49
SKP1-212ENST00000523966 LRRC47Q8N1G4 583 aaKnown RBP5.77□□□□□ -1.49
SKP1-212ENST00000523966 CRACR2BQ8N4Y2 399 aaPredicted RBP5.77□□□□□ -1.49
SKP1-212ENST00000523966 SHKBP1Q8TBC3 707 aa5.77□□□□□ -1.49
SKP1-212ENST00000523966 KLHL6Q8WZ60 621 aa5.77□□□□□ -1.49
SKP1-212ENST00000523966 ZNF669Q96BR6 464 aaPredicted RBP5.77□□□□□ -1.49
SKP1-212ENST00000523966 DNAJC7Q99615 494 aa5.77□□□□□ -1.49
SKP1-212ENST00000523966 DSCC1Q9BVC3 393 aa5.77□□□□□ -1.49
SKP1-212ENST00000523966 PFDN2Q9UHV9 154 aa5.77□□□□□ -1.49
SKP1-212ENST00000523966 KDM2BQ8NHM5 1336 aa5.76□□□□□ -1.49
SKP1-212ENST00000523966 F13BP05160 661 aa5.76□□□□□ -1.49
SKP1-212ENST00000523966 EPHX1P07099 455 aa5.76□□□□□ -1.49
SKP1-212ENST00000523966 CD247P20963 164 aa5.76□□□□□ -1.49
SKP1-212ENST00000523966 CANXP27824 592 aaKnown RBP5.76□□□□□ -1.49
SKP1-212ENST00000523966 NBPF9Q3BBW0 867 aa5.76□□□□□ -1.49
SKP1-212ENST00000523966 GPAT2Q6NUI2 795 aa5.76□□□□□ -1.49
SKP1-212ENST00000523966 GIMAP6Q6P9H5 292 aa5.76□□□□□ -1.49
SKP1-212ENST00000523966 MFSD4AQ8N468 514 aa5.76□□□□□ -1.49
SKP1-212ENST00000523966 LRRN4CLQ8ND94 238 aa5.76□□□□□ -1.49
SKP1-212ENST00000523966 FGD4Q96M96 766 aa5.76□□□□□ -1.49
SKP1-212ENST00000523966 TRIT1Q9H3H1 467 aaKnown RBP5.76□□□□□ -1.49
SKP1-212ENST00000523966 WHRNQ9P202 907 aa5.76□□□□□ -1.49
SKP1-212ENST00000523966 CYP26A1O43174 497 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 LRRN2O75325 713 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 IGHA1P01876 353 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 ITIH2P19823 946 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 GSK3AP49840 483 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 POMZP3Q6PJE2 187 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 PIWIL2Q8TC59 973 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms