RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 COL3A1P02461 1466 aaPredicted RBP6.82□□□□□ -1.32
PABPC1-223ENST00000523636 PRAMEF22A3QJZ6 481 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 SOBPA7XYQ1 873 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 H7C1W4 665 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 EIF1AXP47813 144 aaKnown RBP6.82□□□□□ -1.32
PABPC1-223ENST00000523636 FKBP1BP68106 108 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 CRY2Q49AN0 593 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 EFHC2Q5JST6 749 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 ZNF787Q6DD87 383 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 ETFBKMTQ8IXQ9 262 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 CCDC155Q8N6L0 562 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 NECAB3Q96P71 396 aaPredicted RBP6.82□□□□□ -1.32
PABPC1-223ENST00000523636 SETDB2Q96T68 719 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 GAS2L1Q99501 681 aaPredicted RBP6.82□□□□□ -1.32
PABPC1-223ENST00000523636 BCL2L13Q9BXK5 485 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 TTYH1Q9H313 450 aaPredicted RBP6.82□□□□□ -1.32
PABPC1-223ENST00000523636 EPHX3Q9H6B9 360 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 FAM13BQ9NYF5 915 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 DMGDHQ9UI17 866 aaKnown RBP6.82□□□□□ -1.32
PABPC1-223ENST00000523636 ABCC12Q96J65 1359 aa6.82□□□□□ -1.32
PABPC1-223ENST00000523636 SNRPBP14678 240 aaKnown RBP6.81□□□□□ -1.32
PABPC1-223ENST00000523636 ERCC3P19447 782 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 SP3Q02447 781 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 SLC39A6Q13433 755 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 PRAMEF18Q5VWM3 479 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 FIGNL1Q6PIW4 674 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 TREML1Q86YW5 311 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 DCPSQ96C86 337 aaKnown RBP6.81□□□□□ -1.32
PABPC1-223ENST00000523636 PKNOX2Q96KN3 472 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 CITED4Q96RK1 184 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 UHRF1Q96T88 793 aaPredicted RBP6.81□□□□□ -1.32
PABPC1-223ENST00000523636 PTPN18Q99952 460 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 C1QTNF1Q9BXJ1 281 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 ARHGAP39Q9C0H5 1083 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 SEMA6BQ9H3T3 888 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 RUBCNLQ9H714 662 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 GPAMQ9HCL2 828 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 ZNF318Q5VUA4 2279 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 RIC1Q4ADV7 1423 aa6.81□□□□□ -1.32
PABPC1-223ENST00000523636 ZFHX2Q9C0A1 2572 aaPredicted RBP6.81□□□□□ -1.32
PABPC1-223ENST00000523636 H7C1D1 291 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 MICAL2O94851 1124 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 FARP2O94887 1054 aaPredicted RBP6.8□□□□□ -1.32
PABPC1-223ENST00000523636 GJB1P08034 283 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 SYN1P17600 705 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 ALDH1B1P30837 517 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 ZAP70P43403 619 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 MARSP56192 900 aaKnown RBP6.8□□□□□ -1.32
PABPC1-223ENST00000523636 PTPN12Q05209 780 aaKnown RBP6.8□□□□□ -1.32
PABPC1-223ENST00000523636 FAM26DQ5JW98 314 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 LRRC69Q6ZNQ3 347 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 HDGFL2Q7Z4V5 671 aaPredicted RBP6.8□□□□□ -1.32
PABPC1-223ENST00000523636 BTLAQ7Z6A9 289 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 TRIM22Q8IYM9 498 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 ANKRD13AQ8IZ07 590 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 ZNF280CQ8ND82 737 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 DPF2Q92785 391 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 HSH2DQ96JZ2 352 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 DCTN4Q9UJW0 460 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 KIF24Q5T7B8 1368 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 LAMB2P55268 1798 aa6.8□□□□□ -1.32
PABPC1-223ENST00000523636 PSMD14O00487 310 aa6.79□□□□□ -1.32
PABPC1-223ENST00000523636 ZBTB39O15060 712 aa6.79□□□□□ -1.32
PABPC1-223ENST00000523636 NDUFB5O43674 189 aa6.79□□□□□ -1.32
PABPC1-223ENST00000523636 RPLP1P05386 114 aaKnown RBP6.79□□□□□ -1.32
PABPC1-223ENST00000523636 ITGA6P23229 1130 aa6.79□□□□□ -1.32
PABPC1-223ENST00000523636 CTGFP29279 349 aa6.79□□□□□ -1.32
PABPC1-223ENST00000523636 USP5P45974 858 aa6.79□□□□□ -1.32
PABPC1-223ENST00000523636 RIPOR1Q6ZS17 1223 aa6.79□□□□□ -1.32
PABPC1-223ENST00000523636 TMC1Q8TDI8 760 aa6.79□□□□□ -1.32
PABPC1-223ENST00000523636 RTFDC1Q9BY42 306 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-223ENST00000523636 RBCK1Q9BYM8 510 aa6.79□□□□□ -1.32
PABPC1-223ENST00000523636 NUCKS1Q9H1E3 243 aaKnown RBP6.79□□□□□ -1.32
PABPC1-223ENST00000523636 KCNQ5Q9NR82 932 aa6.79□□□□□ -1.32
PABPC1-223ENST00000523636 ZNF292O60281 2723 aa6.79□□□□□ -1.32
PABPC1-223ENST00000523636 NCOR2Q9Y618 2525 aa6.79□□□□□ -1.32
PABPC1-223ENST00000523636 MAST4O15021 2626 aa6.79□□□□□ -1.32
PABPC1-223ENST00000523636 TCERG1O14776 1098 aaKnown RBP6.78□□□□□ -1.32
PABPC1-223ENST00000523636 FYB1O15117 783 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 FZD6O60353 706 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 FAM157BP0CG42 384 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 CCL5P13501 91 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 EPB42P16452 691 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 MZF1P28698 734 aaPredicted RBP6.78□□□□□ -1.32
PABPC1-223ENST00000523636 INPP5BP32019 993 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 IDH3AP50213 366 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 ARSDP51689 593 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 NHLH1Q02575 133 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 TYRO3Q06418 890 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 KIF4BQ2VIQ3 1234 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 ANGEL2Q5VTE6 544 aaKnown RBP6.78□□□□□ -1.32
PABPC1-223ENST00000523636 NBPF5PQ86XG9 351 aaPredicted RBP6.78□□□□□ -1.32
PABPC1-223ENST00000523636 C7orf61Q8IZ16 206 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 FZD1Q9UP38 647 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 RTL9Q8NET4 1388 aa6.78□□□□□ -1.32
PABPC1-223ENST00000523636 PTPRZ1P23471 2315 aaPredicted RBP6.77□□□□□ -1.33
PABPC1-223ENST00000523636 A0A0U1RQG5 324 aaPredicted RBP6.77□□□□□ -1.33
PABPC1-223ENST00000523636 OPLAHO14841 1288 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 PCSK2P16519 638 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 MAPK1P28482 360 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms