RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 LRRN4CLQ8ND94 238 aa7.26□□□□□ -1.25
HMGB1P1-201ENST00000522557 DNAJC2Q99543 621 aaKnown RBP7.26□□□□□ -1.25
HMGB1P1-201ENST00000522557 RC3H2Q9HBD1 1191 aaKnown RBP7.26□□□□□ -1.25
HMGB1P1-201ENST00000522557 GINM1Q9NU53 330 aa7.26□□□□□ -1.25
HMGB1P1-201ENST00000522557 ZSWIM5Q9P217 1185 aa7.26□□□□□ -1.25
HMGB1P1-201ENST00000522557 SLC22A31A6NKX4 558 aa7.25□□□□□ -1.25
HMGB1P1-201ENST00000522557 PAX4O43316 350 aa7.25□□□□□ -1.25
HMGB1P1-201ENST00000522557 ITGB5P18084 799 aa7.25□□□□□ -1.25
HMGB1P1-201ENST00000522557 KIR3DL1P43629 444 aa7.25□□□□□ -1.25
HMGB1P1-201ENST00000522557 CLCQ05315 142 aa7.25□□□□□ -1.25
HMGB1P1-201ENST00000522557 SLC23A3Q6PIS1 610 aa7.25□□□□□ -1.25
HMGB1P1-201ENST00000522557 COX4I2Q96KJ9 171 aa7.25□□□□□ -1.25
HMGB1P1-201ENST00000522557 KIF2CQ99661 725 aa7.25□□□□□ -1.25
HMGB1P1-201ENST00000522557 STRIP2Q9ULQ0 834 aa7.25□□□□□ -1.25
HMGB1P1-201ENST00000522557 NASPP49321 788 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P1-201ENST00000522557 NBPF6Q5VWK0 638 aa7.24□□□□□ -1.25
HMGB1P1-201ENST00000522557 GIMAP6Q6P9H5 292 aa7.24□□□□□ -1.25
HMGB1P1-201ENST00000522557 CCDC74BQ96LY2 380 aa7.24□□□□□ -1.25
HMGB1P1-201ENST00000522557 NBPF4Q96M43 638 aa7.24□□□□□ -1.25
HMGB1P1-201ENST00000522557 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.24□□□□□ -1.25
HMGB1P1-201ENST00000522557 ZNF408Q9H9D4 720 aa7.24□□□□□ -1.25
HMGB1P1-201ENST00000522557 CARS2Q9HA77 564 aaKnown RBP7.24□□□□□ -1.25
HMGB1P1-201ENST00000522557 ATE1O95260 518 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 PAPLNO95428 1278 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 MCM4P33991 863 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 GTF2F1P35269 517 aaKnown RBP eCLIP7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 APOBRQ0VD83 1088 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 ARSHQ5FYA8 562 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 GK5Q6ZS86 529 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 VPS37DQ86XT2 251 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 PHACTR4Q8IZ21 702 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 NKD1Q969G9 470 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 SHDQ96IW2 340 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 HIRIP3Q9BW71 556 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 DUSP15Q9H1R2 295 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 PIF1Q9H611 641 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 LMCD1Q9NZU5 365 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 PPP1R1BQ9UD71 204 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 EFR3BQ9Y2G0 817 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 RNF114Q9Y508 228 aa7.23□□□□□ -1.25
HMGB1P1-201ENST00000522557 KLF4O43474 513 aa7.22□□□□□ -1.25
HMGB1P1-201ENST00000522557 THAP5Q7Z6K1 395 aa7.22□□□□□ -1.25
HMGB1P1-201ENST00000522557 FAM177A1Q8N128 213 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P1-201ENST00000522557 PIWIL2Q8TC59 973 aaKnown RBP7.22□□□□□ -1.25
HMGB1P1-201ENST00000522557 KREMEN1Q96MU8 473 aa7.22□□□□□ -1.25
HMGB1P1-201ENST00000522557 FMNL2Q96PY5 1086 aa7.22□□□□□ -1.25
HMGB1P1-201ENST00000522557 KRTAP9-2Q9BYQ4 174 aa7.22□□□□□ -1.25
HMGB1P1-201ENST00000522557 ANTXR1Q9H6X2 564 aa7.22□□□□□ -1.25
HMGB1P1-201ENST00000522557 EHMT1Q9H9B1 1298 aa7.22□□□□□ -1.25
HMGB1P1-201ENST00000522557 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P1-201ENST00000522557 RGS13O14921 159 aa7.21□□□□□ -1.26
HMGB1P1-201ENST00000522557 JUNBP17275 347 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P1-201ENST00000522557 GBP1P32455 592 aa7.21□□□□□ -1.26
HMGB1P1-201ENST00000522557 MLECQ14165 292 aa7.21□□□□□ -1.26
HMGB1P1-201ENST00000522557 CCDC144BQ3MJ40 725 aa7.21□□□□□ -1.26
HMGB1P1-201ENST00000522557 ATG4DQ86TL0 474 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P1-201ENST00000522557 NOP9Q86U38 636 aaKnown RBP7.21□□□□□ -1.26
HMGB1P1-201ENST00000522557 DTWD2Q8NBA8 298 aa7.21□□□□□ -1.26
HMGB1P1-201ENST00000522557 RNF141Q8WVD5 230 aa7.21□□□□□ -1.26
HMGB1P1-201ENST00000522557 ASIC4Q96FT7 647 aa7.21□□□□□ -1.26
HMGB1P1-201ENST00000522557 TBX22Q9Y458 520 aa7.21□□□□□ -1.26
HMGB1P1-201ENST00000522557 CARMIL2Q6F5E8 1435 aa7.2□□□□□ -1.26
HMGB1P1-201ENST00000522557 UBOX5O94941 541 aa7.2□□□□□ -1.26
HMGB1P1-201ENST00000522557 ESR1P03372 595 aa7.2□□□□□ -1.26
HMGB1P1-201ENST00000522557 SOGA3Q5TF21 947 aa7.2□□□□□ -1.26
HMGB1P1-201ENST00000522557 OVOS1Q6IE37 1185 aa7.2□□□□□ -1.26
HMGB1P1-201ENST00000522557 REXO1Q8N1G1 1221 aaKnown RBP7.2□□□□□ -1.26
HMGB1P1-201ENST00000522557 VWCEQ96DN2 955 aa7.2□□□□□ -1.26
HMGB1P1-201ENST00000522557 ATG4CQ96DT6 458 aa7.2□□□□□ -1.26
HMGB1P1-201ENST00000522557 GMIPQ9P107 970 aa7.2□□□□□ -1.26
HMGB1P1-201ENST00000522557 ZNRF3Q9ULT6 936 aa7.2□□□□□ -1.26
HMGB1P1-201ENST00000522557 BIN1O00499 593 aa7.19□□□□□ -1.26
HMGB1P1-201ENST00000522557 STK10O94804 968 aaKnown RBP7.19□□□□□ -1.26
HMGB1P1-201ENST00000522557 SRFP11831 508 aa7.19□□□□□ -1.26
HMGB1P1-201ENST00000522557 RAG1P15918 1043 aa7.19□□□□□ -1.26
HMGB1P1-201ENST00000522557 TPP2P29144 1249 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P1-201ENST00000522557 POLR2BP30876 1174 aaKnown RBP7.19□□□□□ -1.26
HMGB1P1-201ENST00000522557 ETFBP38117 255 aa7.19□□□□□ -1.26
HMGB1P1-201ENST00000522557 ZNF165P49910 485 aa7.19□□□□□ -1.26
HMGB1P1-201ENST00000522557 RBBP8NLQ8NC74 664 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P1-201ENST00000522557 OSBPL2Q9H1P3 480 aa7.19□□□□□ -1.26
HMGB1P1-201ENST00000522557 KCNH3Q9ULD8 1083 aa7.19□□□□□ -1.26
HMGB1P1-201ENST00000522557 CTNND2Q9UQB3 1225 aa7.19□□□□□ -1.26
HMGB1P1-201ENST00000522557 KRTAP9-6A0A140TA67 174 aa7.18□□□□□ -1.26
HMGB1P1-201ENST00000522557 GIPRP48546 466 aa7.18□□□□□ -1.26
HMGB1P1-201ENST00000522557 CDCP2Q5VXM1 449 aa7.18□□□□□ -1.26
HMGB1P1-201ENST00000522557 CREG2Q8IUH2 290 aa7.18□□□□□ -1.26
HMGB1P1-201ENST00000522557 FAM169BQ8N8A8 192 aa7.18□□□□□ -1.26
HMGB1P1-201ENST00000522557 MKL1Q969V6 931 aa7.18□□□□□ -1.26
HMGB1P1-201ENST00000522557 GPR62Q9BZJ7 368 aa7.18□□□□□ -1.26
HMGB1P1-201ENST00000522557 CNNM2Q9H8M5 875 aa7.18□□□□□ -1.26
HMGB1P1-201ENST00000522557 C19orf73Q9NVV2 129 aa7.18□□□□□ -1.26
HMGB1P1-201ENST00000522557 PRKAG3Q9UGI9 489 aa7.18□□□□□ -1.26
HMGB1P1-201ENST00000522557 MSRB2Q9Y3D2 182 aa7.18□□□□□ -1.26
HMGB1P1-201ENST00000522557 GAB4Q2WGN9 574 aa7.17□□□□□ -1.26
HMGB1P1-201ENST00000522557 FYB2Q5VWT5 728 aa7.17□□□□□ -1.26
HMGB1P1-201ENST00000522557 TMPRSS7Q7RTY8 843 aa7.17□□□□□ -1.26
HMGB1P1-201ENST00000522557 NLGN1Q8N2Q7 840 aa7.17□□□□□ -1.26
HMGB1P1-201ENST00000522557 SRRTQ9BXP5 876 aaKnown RBP7.17□□□□□ -1.26
HMGB1P1-201ENST00000522557 TRIT1Q9H3H1 467 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms