RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ZNF202O95125 648 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 TNNI1P19237 187 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 ALDH3A1P30838 453 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 USP14P54578 494 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 ZBTB16Q05516 673 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 RASA3Q14644 834 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 CCDC25Q86WR0 208 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 ATRIPQ8WXE1 791 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 hCG_1642624A0A1W2PR95 340 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 LRRC24Q50LG9 513 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 SEPT12Q8IYM1 358 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 LRRC47Q8N1G4 583 aaKnown RBP18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 DDAH1O94760 285 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 ANKARQ7Z5J8 1434 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 PROCA1Q8NCQ7 364 aaPredicted RBP18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 STIM2Q9P246 746 aa18.04■□□□□ 0.48
PCDHA3-201ENST00000522353 IGSF1Q8N6C5 1336 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 PALM3A6NDB9 673 aaPredicted RBP18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 EDC3Q96F86 508 aaKnown RBP18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 SMC6Q96SB8 1091 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 ERBB3P21860 1342 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 TMEM232C9JQI7 657 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 GNA14O95837 355 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 PRR16Q569H4 304 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 GPATCH4Q5T3I0 446 aaKnown RBP18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 ZNF365Q70YC5 407 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 CSRNP1Q96S65 589 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 RIOK1Q9BRS2 568 aaKnown RBP18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 CLSTN2Q9H4D0 955 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 PCDHA12Q9UN75 941 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 ATP10DQ9P241 1426 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 ERVV-1B6SEH8 477 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 RAD51AP2Q09MP3 1159 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 POSTNQ15063 836 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 CYP26C1Q6V0L0 522 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 ANKS4BQ8N8V4 417 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 CCPG1Q9ULG6 757 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 ZMYM4Q5VZL5 1548 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 ARHGEF5Q12774 1597 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 NELFCDQ8IXH7 590 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 NRBP2Q9NSY0 501 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 TBC1D7Q9P0N9 293 aa18.03■□□□□ 0.48
PCDHA3-201ENST00000522353 ARMC9Q7Z3E5 817 aa18.02■□□□□ 0.48
PCDHA3-201ENST00000522353 DPP9Q86TI2 863 aa18.02■□□□□ 0.48
PCDHA3-201ENST00000522353 GOLGA5Q8TBA6 731 aa18.02■□□□□ 0.48
PCDHA3-201ENST00000522353 NUCKS1Q9H1E3 243 aaKnown RBP18.02■□□□□ 0.48
PCDHA3-201ENST00000522353 KDM5DQ9BY66 1539 aa18.02■□□□□ 0.48
PCDHA3-201ENST00000522353 IPO4Q8TEX9 1081 aaKnown RBP18.02■□□□□ 0.48
PCDHA3-201ENST00000522353 IQCDQ96DY2 449 aa18.02■□□□□ 0.48
PCDHA3-201ENST00000522353 TEKT3Q9BXF9 490 aa18.02■□□□□ 0.48
PCDHA3-201ENST00000522353 CTTNBP2NLQ9P2B4 639 aa18.02■□□□□ 0.48
PCDHA3-201ENST00000522353 LARSQ9P2J5 1176 aaKnown RBP18.02■□□□□ 0.48
PCDHA3-201ENST00000522353 KDM2BQ8NHM5 1336 aa18.02■□□□□ 0.48
PCDHA3-201ENST00000522353 HSPD1P10809 573 aaKnown RBP18.02■□□□□ 0.47
PCDHA3-201ENST00000522353 OSBPP22059 807 aa18.02■□□□□ 0.47
PCDHA3-201ENST00000522353 NEK8Q86SG6 692 aa18.02■□□□□ 0.47
PCDHA3-201ENST00000522353 FRMPD2Q68DX3 1309 aaPredicted RBP18.02■□□□□ 0.47
PCDHA3-201ENST00000522353 MAP7D1Q3KQU3 841 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 XKR9Q5GH70 373 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 SYT10Q6XYQ8 523 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 RNF169Q8NCN4 708 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 IFT81Q8WYA0 676 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 ACTN4O43707 911 aaKnown RBP18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 PHKA1P46020 1223 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 AMNQ9BXJ7 453 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 RTEL1Q9NZ71 1219 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 CFAP65Q6ZU64 1925 aaKnown RBP18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 SCG2P13521 617 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 ATF7P17544 494 aaPredicted RBP18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 DALRD3Q5D0E6 543 aaKnown RBP18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 FAM102BQ5T8I3 360 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 FAM160B1Q5W0V3 765 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 PODXL2Q9NZ53 605 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 CD2APQ9Y5K6 639 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 FAM193BQ96PV7 902 aaPredicted RBP18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 ATP7BP35670 1465 aa18.01■□□□□ 0.47
PCDHA3-201ENST00000522353 TLDC2A0PJX2 215 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 YARSP54577 528 aaKnown RBP18■□□□□ 0.47
PCDHA3-201ENST00000522353 PLA2G4DQ86XP0 818 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 GTF3C6Q969F1 213 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 SEC24BO95487 1268 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 LIG4P49917 911 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 TERF1P54274 439 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 TUBB2AQ13885 445 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 UIMC1Q96RL1 719 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 TUBB2BQ9BVA1 445 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 CLRN2A0PK11 232 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 BIRC2Q13490 618 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 GPBP1Q86WP2 473 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 PCDHA1Q9Y5I3 950 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 MYSM1Q5VVJ2 828 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 FAM173BQ6P4H8 233 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 RTKN2Q8IZC4 609 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 USP6P35125 1406 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 NOSTRINQ8IVI9 506 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 SELENOSQ9BQE4 189 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 ADD3Q9UEY8 706 aaKnown RBP18■□□□□ 0.47
PCDHA3-201ENST00000522353 NFE2L3Q9Y4A8 694 aa18■□□□□ 0.47
PCDHA3-201ENST00000522353 SSH2Q76I76 1423 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms