RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 TRHRP34981 398 aaPredicted RBP7.58□□□□□ -1.2
CTHRC1-204ENST00000520880 ITGAEP38570 1179 aa7.58□□□□□ -1.2
CTHRC1-204ENST00000520880 SYDE1Q6ZW31 735 aaPredicted RBP7.58□□□□□ -1.2
CTHRC1-204ENST00000520880 PHACTR4Q8IZ21 702 aa7.58□□□□□ -1.2
CTHRC1-204ENST00000520880 ASPNQ9BXN1 380 aa7.58□□□□□ -1.2
CTHRC1-204ENST00000520880 NSUN3Q9H649 340 aaKnown RBP7.58□□□□□ -1.2
CTHRC1-204ENST00000520880 KCNK12Q9HB15 430 aa7.58□□□□□ -1.2
CTHRC1-204ENST00000520880 KCNQ5Q9NR82 932 aa7.58□□□□□ -1.2
CTHRC1-204ENST00000520880 TSPAN15O95858 294 aa7.57□□□□□ -1.2
CTHRC1-204ENST00000520880 KRT1P04264 644 aa7.57□□□□□ -1.2
CTHRC1-204ENST00000520880 ZGLP1P0C6A0 271 aa7.57□□□□□ -1.2
CTHRC1-204ENST00000520880 VWCEQ96DN2 955 aa7.57□□□□□ -1.2
CTHRC1-204ENST00000520880 BCL2L13Q9BXK5 485 aa7.57□□□□□ -1.2
CTHRC1-204ENST00000520880 RBM47A0AV96 593 aaKnown RBP7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 SLC22A31A6NKX4 558 aa7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 GREM1O60565 184 aa7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 EIF4A3P38919 411 aaKnown RBP7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 RAP1GAPP47736 663 aa7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 CWF19L2Q2TBE0 894 aaKnown RBP7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 SPOCD1Q6ZMY3 1216 aa7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 FBXO15Q8NCQ5 510 aaPredicted RBP7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 GIPC2Q8TF65 315 aa7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 PPP1R16BQ96T49 567 aa7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 LRRC3Q9BY71 257 aa7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 C19orf44Q9H6X5 657 aa7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 BRMS1Q9HCU9 246 aa7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 PCDHB14Q9Y5E9 798 aa7.56□□□□□ -1.2
CTHRC1-204ENST00000520880 RGS13O14921 159 aa7.55□□□□□ -1.2
CTHRC1-204ENST00000520880 UBOX5O94941 541 aa7.55□□□□□ -1.2
CTHRC1-204ENST00000520880 GBP1P32455 592 aa7.55□□□□□ -1.2
CTHRC1-204ENST00000520880 CRKP46108 304 aa7.55□□□□□ -1.2
CTHRC1-204ENST00000520880 MRPL58Q14197 206 aaKnown RBP7.55□□□□□ -1.2
CTHRC1-204ENST00000520880 ARSHQ5FYA8 562 aa7.55□□□□□ -1.2
CTHRC1-204ENST00000520880 LCE1DQ5T752 114 aa7.55□□□□□ -1.2
CTHRC1-204ENST00000520880 PDZD8Q8NEN9 1154 aa7.55□□□□□ -1.2
CTHRC1-204ENST00000520880 RNF32Q9H0A6 362 aa7.55□□□□□ -1.2
CTHRC1-204ENST00000520880 SUPT16HQ9Y5B9 1047 aaKnown RBP7.55□□□□□ -1.2
CTHRC1-204ENST00000520880 ROBO2Q9HCK4 1378 aa7.55□□□□□ -1.2
CTHRC1-204ENST00000520880 C1QTNF9P0C862 333 aa7.54□□□□□ -1.2
CTHRC1-204ENST00000520880 TIGD5Q53EQ6 642 aa7.54□□□□□ -1.2
CTHRC1-204ENST00000520880 ZNF296Q8WUU4 475 aaPredicted RBP7.54□□□□□ -1.2
CTHRC1-204ENST00000520880 DCP1AQ9NPI6 582 aaPredicted RBP7.54□□□□□ -1.2
CTHRC1-204ENST00000520880 EBF1Q9UH73 591 aa7.54□□□□□ -1.2
CTHRC1-204ENST00000520880 ATE1O95260 518 aa7.53□□□□□ -1.2
CTHRC1-204ENST00000520880 TEKQ02763 1124 aa7.53□□□□□ -1.2
CTHRC1-204ENST00000520880 MLECQ14165 292 aa7.53□□□□□ -1.2
CTHRC1-204ENST00000520880 EPB41L4BQ9H329 900 aa7.53□□□□□ -1.2
CTHRC1-204ENST00000520880 GMIPQ9P107 970 aa7.53□□□□□ -1.2
CTHRC1-204ENST00000520880 ADAMTS1Q9UHI8 967 aa7.53□□□□□ -1.2
CTHRC1-204ENST00000520880 GGT7Q9UJ14 662 aa7.53□□□□□ -1.2
CTHRC1-204ENST00000520880 RAG1P15918 1043 aa7.52□□□□□ -1.21
CTHRC1-204ENST00000520880 CFPP27918 469 aa7.52□□□□□ -1.21
CTHRC1-204ENST00000520880 POLR2BP30876 1174 aaKnown RBP7.52□□□□□ -1.21
CTHRC1-204ENST00000520880 CLEC16AQ2KHT3 1053 aa7.52□□□□□ -1.21
CTHRC1-204ENST00000520880 ZNF326Q5BKZ1 582 aaKnown RBP7.52□□□□□ -1.21
CTHRC1-204ENST00000520880 OVOS1Q6IE37 1185 aa7.52□□□□□ -1.21
CTHRC1-204ENST00000520880 C1QL4Q86Z23 238 aa7.52□□□□□ -1.21
CTHRC1-204ENST00000520880 OXR1Q8N573 874 aa7.52□□□□□ -1.21
CTHRC1-204ENST00000520880 DHX38Q92620 1227 aaKnown RBP7.52□□□□□ -1.21
CTHRC1-204ENST00000520880 UBP1Q9NZI7 540 aa7.52□□□□□ -1.21
CTHRC1-204ENST00000520880 FITM1A5D6W6 292 aa7.51□□□□□ -1.21
CTHRC1-204ENST00000520880 NMIQ13287 307 aaPredicted RBP7.51□□□□□ -1.21
CTHRC1-204ENST00000520880 NR0B2Q15466 257 aa7.51□□□□□ -1.21
CTHRC1-204ENST00000520880 SEZ6Q53EL9 994 aa7.51□□□□□ -1.21
CTHRC1-204ENST00000520880 LCE4AQ5TA78 99 aa7.51□□□□□ -1.21
CTHRC1-204ENST00000520880 HS2ST1Q7LGA3 356 aa7.51□□□□□ -1.21
CTHRC1-204ENST00000520880 LILRA2Q8N149 483 aa7.51□□□□□ -1.21
CTHRC1-204ENST00000520880 TOX2Q96NM4 488 aa7.51□□□□□ -1.21
CTHRC1-204ENST00000520880 EHMT1Q9H9B1 1298 aa7.51□□□□□ -1.21
CTHRC1-204ENST00000520880 ZNF281Q9Y2X9 895 aa7.51□□□□□ -1.21
CTHRC1-204ENST00000520880 NFIBO00712 420 aa7.5□□□□□ -1.21
CTHRC1-204ENST00000520880 CHMP4BP1P59074 171 aa7.5□□□□□ -1.21
CTHRC1-204ENST00000520880 FBLN7Q53RD9 439 aa7.5□□□□□ -1.21
CTHRC1-204ENST00000520880 CDCP2Q5VXM1 449 aa7.5□□□□□ -1.21
CTHRC1-204ENST00000520880 ANKLE2Q86XL3 938 aa7.5□□□□□ -1.21
CTHRC1-204ENST00000520880 HDAC8Q9BY41 377 aa7.5□□□□□ -1.21
CTHRC1-204ENST00000520880 CNNM2Q9H8M5 875 aa7.5□□□□□ -1.21
CTHRC1-204ENST00000520880 RNF4P78317 190 aa7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 CLCQ05315 142 aa7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 SNW1Q13573 536 aaKnown RBP7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 LDLRAD1Q5T700 205 aa7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 NBPF12Q5TAG4 269 aaPredicted RBP7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 GK5Q6ZS86 529 aa7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 TMC3Q7Z5M5 1100 aa7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 LRRC56Q8IYG6 542 aaPredicted RBP7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 USHBP1Q8N6Y0 703 aa7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 ENOX1Q8TC92 643 aaKnown RBP7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 SYTL5Q8TDW5 730 aaPredicted RBP7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 LINC01599Q8WXQ3 324 aa7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 SYTL4Q96C24 671 aaPredicted RBP7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 ATG4CQ96DT6 458 aa7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 G6PC3Q9BUM1 346 aa7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 ASCC2Q9H1I8 757 aaPredicted RBP7.49□□□□□ -1.21
CTHRC1-204ENST00000520880 ETV2O00321 342 aaPredicted RBP7.48□□□□□ -1.21
CTHRC1-204ENST00000520880 TMEM253P0C7T8 217 aa7.48□□□□□ -1.21
CTHRC1-204ENST00000520880 NBPF9Q3BBW0 867 aa7.48□□□□□ -1.21
CTHRC1-204ENST00000520880 KRTAP19-4Q3LI73 84 aa7.48□□□□□ -1.21
CTHRC1-204ENST00000520880 ATG14Q6ZNE5 492 aa7.48□□□□□ -1.21
CTHRC1-204ENST00000520880 LCNL1Q6ZST4 164 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms