RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 TRAF5O00463 557 aa25.05■■□□□ 1.6
PTP4A3-203ENST00000520105 GJB2P29033 226 aa25.05■■□□□ 1.6
PTP4A3-203ENST00000520105 FMR1Q06787 632 aaKnown RBP eCLIP25.05■■□□□ 1.6
PTP4A3-203ENST00000520105 LDHDQ86WU2 507 aa25.05■■□□□ 1.6
PTP4A3-203ENST00000520105 DDX11Q96FC9 970 aa25.05■■□□□ 1.6
PTP4A3-203ENST00000520105 ATAD5Q96QE3 1844 aa25.05■■□□□ 1.6
PTP4A3-203ENST00000520105 NTRK3Q16288 839 aa25.04■■□□□ 1.6
PTP4A3-203ENST00000520105 CCDC82Q8N4S0 544 aa25.04■■□□□ 1.6
PTP4A3-203ENST00000520105 CTCFLQ8NI51 663 aaPredicted RBP25.04■■□□□ 1.6
PTP4A3-203ENST00000520105 ACER1Q8TDN7 264 aa25.04■■□□□ 1.6
PTP4A3-203ENST00000520105 LLPHQ9BRT6 129 aaKnown RBP25.04■■□□□ 1.6
PTP4A3-203ENST00000520105 PPP1R12BO60237 982 aaPredicted RBP25.04■■□□□ 1.6
PTP4A3-203ENST00000520105 DDIT3P35638 169 aa25.04■■□□□ 1.6
PTP4A3-203ENST00000520105 ECE1P42892 770 aa25.04■■□□□ 1.6
PTP4A3-203ENST00000520105 CWC22Q9HCG8 908 aaKnown RBP25.04■■□□□ 1.6
PTP4A3-203ENST00000520105 CCDC196A0A1B0GTZ2 297 aa25.03■■□□□ 1.6
PTP4A3-203ENST00000520105 PTPDC1A2A3K4 754 aa25.03■■□□□ 1.6
PTP4A3-203ENST00000520105 USP17L5A8MUK1 530 aa25.03■■□□□ 1.6
PTP4A3-203ENST00000520105 NF2P35240 595 aa25.03■■□□□ 1.6
PTP4A3-203ENST00000520105 USP17L2Q6R6M4 530 aa25.03■■□□□ 1.6
PTP4A3-203ENST00000520105 STAG2Q8N3U4 1231 aa25.03■■□□□ 1.6
PTP4A3-203ENST00000520105 SMARCC2Q8TAQ2 1214 aa25.03■■□□□ 1.6
PTP4A3-203ENST00000520105 RAD21O60216 631 aa25.02■■□□□ 1.6
PTP4A3-203ENST00000520105 PLEKHA8P1O95397 391 aa25.02■■□□□ 1.6
PTP4A3-203ENST00000520105 GRM4Q14833 912 aa25.02■■□□□ 1.6
PTP4A3-203ENST00000520105 PPP2R5BQ15173 497 aa25.02■■□□□ 1.6
PTP4A3-203ENST00000520105 SCYL3Q8IZE3 742 aa25.02■■□□□ 1.6
PTP4A3-203ENST00000520105 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.02■■□□□ 1.66e-8■■□□□ 13.8
PTP4A3-203ENST00000520105 PHKBQ93100 1093 aa25.02■■□□□ 1.6
PTP4A3-203ENST00000520105 MAD2L2Q9UI95 211 aa25.02■■□□□ 1.6
PTP4A3-203ENST00000520105 GOLGA8HP0CJ92 632 aa25.02■■□□□ 1.6
PTP4A3-203ENST00000520105 PDHBP11177 359 aa25.02■■□□□ 1.6
PTP4A3-203ENST00000520105 MOB2Q70IA6 237 aa25.02■■□□□ 1.6
PTP4A3-203ENST00000520105 MAP3K14Q99558 947 aa25.02■■□□□ 1.6
PTP4A3-203ENST00000520105 ARHGEF10LQ9HCE6 1279 aa25.02■■□□□ 1.6
PTP4A3-203ENST00000520105 RBM28Q9NW13 759 aaKnown RBP25.02■■□□□ 1.6
PTP4A3-203ENST00000520105 CPLX2Q6PUV4 134 aaKnown RBP25.01■■□□□ 1.59
PTP4A3-203ENST00000520105 GINM1Q9NU53 330 aa25.01■■□□□ 1.59
PTP4A3-203ENST00000520105 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.01■■□□□ 1.59
PTP4A3-203ENST00000520105 BAZ2BQ9UIF8 2168 aaKnown RBP25.01■■□□□ 1.59
PTP4A3-203ENST00000520105 FDPSP14324 419 aaKnown RBP25■■□□□ 1.59
PTP4A3-203ENST00000520105 KIF5BP33176 963 aa25■■□□□ 1.59
PTP4A3-203ENST00000520105 PPP1R3FQ6ZSY5 799 aaPredicted RBP25■■□□□ 1.59
PTP4A3-203ENST00000520105 F5H6K3 240 aa25■■□□□ 1.59
PTP4A3-203ENST00000520105 IFNAR1P17181 557 aa25■■□□□ 1.59
PTP4A3-203ENST00000520105 MAP3K9P80192 1104 aa25■■□□□ 1.59
PTP4A3-203ENST00000520105 KLRC3Q07444 240 aa25■■□□□ 1.59
PTP4A3-203ENST00000520105 TTLL12Q14166 644 aaPredicted RBP25■■□□□ 1.59
PTP4A3-203ENST00000520105 TMTC3Q6ZXV5 915 aa25■■□□□ 1.59
PTP4A3-203ENST00000520105 SRBD1Q8N5C6 995 aaKnown RBP25■■□□□ 1.59
PTP4A3-203ENST00000520105 PICK1Q9NRD5 415 aa25■■□□□ 1.59
PTP4A3-203ENST00000520105 TMX2Q9Y320 296 aa25■■□□□ 1.59
PTP4A3-203ENST00000520105 PALM3A6NDB9 673 aaPredicted RBP24.99■■□□□ 1.59
PTP4A3-203ENST00000520105 CDKL5O76039 1030 aa24.99■■□□□ 1.59
PTP4A3-203ENST00000520105 PARP1P09874 1014 aaKnown RBP24.99■■□□□ 1.59
PTP4A3-203ENST00000520105 SNHG28P0DPA3 235 aa24.99■■□□□ 1.59
PTP4A3-203ENST00000520105 NBPF11Q86T75 865 aa24.99■■□□□ 1.59
PTP4A3-203ENST00000520105 ZNF408Q9H9D4 720 aa24.99■■□□□ 1.59
PTP4A3-203ENST00000520105 FRMPD2Q68DX3 1309 aaPredicted RBP24.99■■□□□ 1.59
PTP4A3-203ENST00000520105 DOCK1Q14185 1865 aa24.99■■□□□ 1.59
PTP4A3-203ENST00000520105 UBE2Q2LH0YL09 131 aa24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 PTPRAP18433 802 aa24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 IREB2P48200 963 aaKnown RBP24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 FUT2Q10981 343 aa24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 SLFN13Q68D06 897 aa24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 SLC26A6Q9BXS9 759 aa24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 ORC3Q9UBD5 711 aaPredicted RBP24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 HMGN5P82970 282 aaKnown RBP24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 PKP1Q13835 747 aa24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 VGLL4Q14135 290 aa24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 ZYXQ15942 572 aaKnown RBP24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 GMCL1P1Q8NEA9 526 aa24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 CPVLQ9H3G5 476 aa24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 GPBP1L1Q9HC44 474 aaPredicted RBP24.98■■□□□ 1.59
PTP4A3-203ENST00000520105 KLRF2D3W0D1 207 aa24.97■■□□□ 1.59
PTP4A3-203ENST00000520105 KIAA1755Q5JYT7 1200 aa24.97■■□□□ 1.59
PTP4A3-203ENST00000520105 NOL9Q5SY16 702 aaKnown RBP24.97■■□□□ 1.59
PTP4A3-203ENST00000520105 SPICE1Q8N0Z3 855 aa24.97■■□□□ 1.59
PTP4A3-203ENST00000520105 FAM184AQ8NB25 1140 aa24.97■■□□□ 1.59
PTP4A3-203ENST00000520105 GPCPD1Q9NPB8 672 aa24.97■■□□□ 1.59
PTP4A3-203ENST00000520105 NDUFB10O96000 172 aa24.96■■□□□ 1.59
PTP4A3-203ENST00000520105 SSRP1Q08945 709 aaKnown RBP24.96■■□□□ 1.59
PTP4A3-203ENST00000520105 KCTD1Q719H9 257 aa24.96■■□□□ 1.59
PTP4A3-203ENST00000520105 SNCAIPQ9Y6H5 919 aa24.96■■□□□ 1.59
PTP4A3-203ENST00000520105 ZHX2Q9Y6X8 837 aa24.96■■□□□ 1.59
PTP4A3-203ENST00000520105 FMNL1O95466 1100 aaPredicted RBP24.96■■□□□ 1.59
PTP4A3-203ENST00000520105 SLC1A4P43007 532 aa24.96■■□□□ 1.59
PTP4A3-203ENST00000520105 ZNF543Q08ER8 600 aa24.96■■□□□ 1.59
PTP4A3-203ENST00000520105 SLC35G1Q2M3R5 365 aa24.96■■□□□ 1.59
PTP4A3-203ENST00000520105 CHADLQ6NUI6 762 aa24.96■■□□□ 1.59
PTP4A3-203ENST00000520105 NUP88Q99567 741 aaPredicted RBP24.96■■□□□ 1.59
PTP4A3-203ENST00000520105 UBA5Q9GZZ9 404 aa24.96■■□□□ 1.59
PTP4A3-203ENST00000520105 SYNPO2Q9UMS6 1093 aa24.96■■□□□ 1.59
PTP4A3-203ENST00000520105 hCG_1642624A0A1W2PR95 340 aa24.95■■□□□ 1.58
PTP4A3-203ENST00000520105 SYT1P21579 422 aa24.95■■□□□ 1.58
PTP4A3-203ENST00000520105 GNAQP50148 359 aa24.95■■□□□ 1.58
PTP4A3-203ENST00000520105 SPP2Q13103 211 aa24.95■■□□□ 1.58
PTP4A3-203ENST00000520105 CCDC96Q2M329 555 aa24.95■■□□□ 1.58
PTP4A3-203ENST00000520105 LARP1BQ659C4 914 aaKnown RBP24.95■■□□□ 1.58
PTP4A3-203ENST00000520105 TTBK2Q6IQ55 1244 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms