RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 F5H6K3 240 aa17.12■□□□□ 0.33
SNF8-212ENST00000514089 NMT2O60551 498 aa17.12■□□□□ 0.33
SNF8-212ENST00000514089 VCAM1P19320 739 aa17.12■□□□□ 0.33
SNF8-212ENST00000514089 KLRC3Q07444 240 aa17.12■□□□□ 0.33
SNF8-212ENST00000514089 CCAR1Q8IX12 1150 aaKnown RBP17.12■□□□□ 0.33
SNF8-212ENST00000514089 ZKSCAN3Q9BRR0 538 aa17.12■□□□□ 0.33
SNF8-212ENST00000514089 ASCC2Q9H1I8 757 aaPredicted RBP17.12■□□□□ 0.33
SNF8-212ENST00000514089 R3HDMLQ9H3Y0 253 aa17.12■□□□□ 0.33
SNF8-212ENST00000514089 NEDD4P46934 1319 aa17.12■□□□□ 0.33
SNF8-212ENST00000514089 E7EWF7 191 aa17.11■□□□□ 0.33
SNF8-212ENST00000514089 HOXA7P31268 230 aaPredicted RBP17.11■□□□□ 0.33
SNF8-212ENST00000514089 SP3Q02447 781 aa17.11■□□□□ 0.33
SNF8-212ENST00000514089 SART3Q15020 963 aaKnown RBP17.11■□□□□ 0.33
SNF8-212ENST00000514089 CREB3L3Q68CJ9 461 aa17.11■□□□□ 0.33
SNF8-212ENST00000514089 LRRC47Q8N1G4 583 aaKnown RBP17.11■□□□□ 0.33
SNF8-212ENST00000514089 CHMP4CQ96CF2 233 aa17.11■□□□□ 0.33
SNF8-212ENST00000514089 C12orf42Q96LP6 360 aa17.11■□□□□ 0.33
SNF8-212ENST00000514089 TTC14Q96N46 770 aa17.11■□□□□ 0.33
SNF8-212ENST00000514089 CFHR5Q9BXR6 569 aa17.11■□□□□ 0.33
SNF8-212ENST00000514089 NBPF3Q9H094 633 aa17.11■□□□□ 0.33
SNF8-212ENST00000514089 PRDM10Q9NQV6 1147 aa17.11■□□□□ 0.33
SNF8-212ENST00000514089 TCP11L1Q9NUJ3 509 aa17.11■□□□□ 0.33
SNF8-212ENST00000514089 HOXC10Q9NYD6 342 aa17.11■□□□□ 0.33
SNF8-212ENST00000514089 ZSWIM5Q9P217 1185 aa17.11■□□□□ 0.33
SNF8-212ENST00000514089 CTDP1Q9Y5B0 961 aaPredicted RBP17.11■□□□□ 0.33
SNF8-212ENST00000514089 TACC3Q9Y6A5 838 aa17.11■□□□□ 0.33
SNF8-212ENST00000514089 NAV1Q8NEY1 1877 aa17.1■□□□□ 0.33
SNF8-212ENST00000514089 IGKV6D-41A0A0C4DH26 115 aa17.1■□□□□ 0.33
SNF8-212ENST00000514089 SLC27A2O14975 620 aa17.1■□□□□ 0.33
SNF8-212ENST00000514089 ECM2O94769 699 aaPredicted RBP17.1■□□□□ 0.33
SNF8-212ENST00000514089 MCCP23508 829 aa17.1■□□□□ 0.33
SNF8-212ENST00000514089 GCLCP48506 637 aaPredicted RBP17.1■□□□□ 0.33
SNF8-212ENST00000514089 IKQ13123 557 aaPredicted RBP17.1■□□□□ 0.33
SNF8-212ENST00000514089 SLFN13Q68D06 897 aa17.1■□□□□ 0.33
SNF8-212ENST00000514089 CATSPERGQ6ZRH7 1159 aa17.1■□□□□ 0.33
SNF8-212ENST00000514089 ZNF296Q8WUU4 475 aaPredicted RBP17.1■□□□□ 0.33
SNF8-212ENST00000514089 MKL1Q969V6 931 aa17.1■□□□□ 0.33
SNF8-212ENST00000514089 ZSCAN10Q96SZ4 725 aaPredicted RBP17.1■□□□□ 0.33
SNF8-212ENST00000514089 P2RX7Q99572 595 aaKnown RBP17.1■□□□□ 0.33
SNF8-212ENST00000514089 IL17RBQ9NRM6 502 aa17.1■□□□□ 0.33
SNF8-212ENST00000514089 WDR46O15213 610 aaKnown RBP17.09■□□□□ 0.33
SNF8-212ENST00000514089 FLOT1O75955 427 aa17.09■□□□□ 0.33
SNF8-212ENST00000514089 TOP1P11387 765 aaKnown RBP17.09■□□□□ 0.33
SNF8-212ENST00000514089 COG2Q14746 738 aa17.09■□□□□ 0.33
SNF8-212ENST00000514089 NECTIN1Q15223 517 aa17.09■□□□□ 0.33
SNF8-212ENST00000514089 ANKRD13CQ8N6S4 541 aa17.09■□□□□ 0.33
SNF8-212ENST00000514089 ERO1AQ96HE7 468 aa17.09■□□□□ 0.33
SNF8-212ENST00000514089 KAT14Q9H8E8 782 aa17.09■□□□□ 0.33
SNF8-212ENST00000514089 CWC22Q9HCG8 908 aaKnown RBP17.09■□□□□ 0.33
SNF8-212ENST00000514089 SYNPO2Q9UMS6 1093 aa17.09■□□□□ 0.33
SNF8-212ENST00000514089 MYH1P12882 1939 aa17.09■□□□□ 0.33
SNF8-212ENST00000514089 MYH7P12883 1935 aa17.09■□□□□ 0.33
SNF8-212ENST00000514089 IFIT3O14879 490 aaKnown RBP17.08■□□□□ 0.32
SNF8-212ENST00000514089 NDUFB10O96000 172 aa17.08■□□□□ 0.32
SNF8-212ENST00000514089 SLC1A4P43007 532 aa17.08■□□□□ 0.32
SNF8-212ENST00000514089 HERVK_113P62684 666 aa17.08■□□□□ 0.32
SNF8-212ENST00000514089 KRT32Q14532 448 aa17.08■□□□□ 0.32
SNF8-212ENST00000514089 FAM83BQ5T0W9 1011 aa17.08■□□□□ 0.32
SNF8-212ENST00000514089 DGKHQ86XP1 1220 aa17.08■□□□□ 0.32
SNF8-212ENST00000514089 GTF3C2Q8WUA4 911 aaPredicted RBP17.08■□□□□ 0.32
SNF8-212ENST00000514089 PAGR1Q9BTK6 254 aa17.08■□□□□ 0.32
SNF8-212ENST00000514089 PLIN4Q96Q06 1357 aa17.07■□□□□ 0.32
SNF8-212ENST00000514089 FMNL1O95466 1100 aaPredicted RBP17.07■□□□□ 0.32
SNF8-212ENST00000514089 CCDC96Q2M329 555 aa17.07■□□□□ 0.32
SNF8-212ENST00000514089 NOM1Q5C9Z4 860 aaKnown RBP17.07■□□□□ 0.32
SNF8-212ENST00000514089 IFIT1BQ5T764 474 aaKnown RBP17.07■□□□□ 0.32
SNF8-212ENST00000514089 C17orf99Q6UX52 265 aa17.07■□□□□ 0.32
SNF8-212ENST00000514089 GMCL1P1Q8NEA9 526 aa17.07■□□□□ 0.32
SNF8-212ENST00000514089 GPRC5AQ8NFJ5 357 aa17.07■□□□□ 0.32
SNF8-212ENST00000514089 NUP88Q99567 741 aaPredicted RBP17.07■□□□□ 0.32
SNF8-212ENST00000514089 TMEM47Q9BQJ4 181 aa17.07■□□□□ 0.32
SNF8-212ENST00000514089 FOCADQ5VW36 1801 aa17.06■□□□□ 0.32
SNF8-212ENST00000514089 BMP3P12645 472 aa17.06■□□□□ 0.32
SNF8-212ENST00000514089 MCM5P33992 734 aa17.06■□□□□ 0.32
SNF8-212ENST00000514089 FGD1P98174 961 aa17.06■□□□□ 0.32
SNF8-212ENST00000514089 KIAA1755Q5JYT7 1200 aa17.06■□□□□ 0.32
SNF8-212ENST00000514089 CHST3Q7LGC8 479 aa17.06■□□□□ 0.32
SNF8-212ENST00000514089 NEK1Q96PY6 1258 aa17.06■□□□□ 0.32
SNF8-212ENST00000514089 TNKSO95271 1327 aa17.05■□□□□ 0.32
SNF8-212ENST00000514089 HOXD10P28358 340 aa17.05■□□□□ 0.32
SNF8-212ENST00000514089 PLS1Q14651 629 aa17.05■□□□□ 0.32
SNF8-212ENST00000514089 TMEM67Q5HYA8 995 aa17.05■□□□□ 0.32
SNF8-212ENST00000514089 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
SNF8-212ENST00000514089 CYB5R4Q7L1T6 521 aa17.05■□□□□ 0.32
SNF8-212ENST00000514089 CD99L2Q8TCZ2 262 aa17.05■□□□□ 0.32
SNF8-212ENST00000514089 CHURC1Q8WUH1 139 aa17.05■□□□□ 0.32
SNF8-212ENST00000514089 KIFC2Q96AC6 838 aa17.05■□□□□ 0.32
SNF8-212ENST00000514089 EFCC1Q9HA90 598 aa17.05■□□□□ 0.32
SNF8-212ENST00000514089 FEM1BQ9UK73 627 aa17.05■□□□□ 0.32
SNF8-212ENST00000514089 TMEM232C9JQI7 657 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 ZBED4O75132 1171 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 PSMC4P43686 418 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 FCGRTP55899 365 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 CCNA1P78396 465 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 WTAPQ15007 396 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 WDR78Q5VTH9 848 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 RCSD1Q6JBY9 416 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 PRPF38AQ8NAV1 312 aaKnown RBP17.04■□□□□ 0.32
SNF8-212ENST00000514089 DCAF4Q8WV16 495 aa17.04■□□□□ 0.32
SNF8-212ENST00000514089 GMCL1Q96IK5 515 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms