RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 PFKFB2O60825 505 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 CDKL5O76039 1030 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 SLURP2P0DP57 97 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 EEF2P13639 858 aaKnown RBP12.67□□□□□ -0.38
PFDN1-204ENST00000512707 PDIA3P30101 505 aaKnown RBP12.67□□□□□ -0.38
PFDN1-204ENST00000512707 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 ME3Q16798 604 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 NOL9Q5SY16 702 aaKnown RBP12.67□□□□□ -0.38
PFDN1-204ENST00000512707 RCSD1Q6JBY9 416 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 ANKRD13AQ8IZ07 590 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 C2orf69Q8N8R5 385 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 NUP133Q8WUM0 1156 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 MAP3K14Q99558 947 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 FEZ1Q99689 392 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 TMEM47Q9BQJ4 181 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 LARP6Q9BRS8 491 aaKnown RBP12.67□□□□□ -0.38
PFDN1-204ENST00000512707 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.67□□□□□ -0.38
PFDN1-204ENST00000512707 GOPCQ9HD26 462 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 CREBZFQ9NS37 354 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 RBM28Q9NW13 759 aaKnown RBP12.67□□□□□ -0.38
PFDN1-204ENST00000512707 BRPF3Q9ULD4 1205 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 SSC5DA1L4H1 1573 aa12.67□□□□□ -0.38
PFDN1-204ENST00000512707 RAD21O60216 631 aa12.66□□□□□ -0.38
PFDN1-204ENST00000512707 USP2O75604 605 aaPredicted RBP12.66□□□□□ -0.38
PFDN1-204ENST00000512707 INPP5BP32019 993 aa12.66□□□□□ -0.38
PFDN1-204ENST00000512707 NOVP48745 357 aa12.66□□□□□ -0.38
PFDN1-204ENST00000512707 GNAQP50148 359 aa12.66□□□□□ -0.38
PFDN1-204ENST00000512707 RTN1Q16799 776 aa12.66□□□□□ -0.38
PFDN1-204ENST00000512707 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.66□□□□□ -0.38
PFDN1-204ENST00000512707 GTF3C6Q969F1 213 aa12.66□□□□□ -0.38
PFDN1-204ENST00000512707 MKL1Q969V6 931 aa12.66□□□□□ -0.38
PFDN1-204ENST00000512707 INTS4Q96HW7 963 aaKnown RBP12.66□□□□□ -0.38
PFDN1-204ENST00000512707 KIF3AQ9Y496 699 aa12.66□□□□□ -0.38
PFDN1-204ENST00000512707 TRAF5O00463 557 aa12.65□□□□□ -0.38
PFDN1-204ENST00000512707 USP14P54578 494 aa12.65□□□□□ -0.38
PFDN1-204ENST00000512707 RRP1BQ14684 758 aaKnown RBP12.65□□□□□ -0.38
PFDN1-204ENST00000512707 MAP3K11Q16584 847 aa12.65□□□□□ -0.38
PFDN1-204ENST00000512707 CCDC83Q8IWF9 413 aa12.65□□□□□ -0.38
PFDN1-204ENST00000512707 LRRC47Q8N1G4 583 aaKnown RBP12.65□□□□□ -0.38
PFDN1-204ENST00000512707 FANCBQ8NB91 859 aa12.65□□□□□ -0.38
PFDN1-204ENST00000512707 ZKSCAN4Q969J2 545 aaPredicted RBP12.65□□□□□ -0.38
PFDN1-204ENST00000512707 LLPHQ9BRT6 129 aaKnown RBP12.65□□□□□ -0.38
PFDN1-204ENST00000512707 SENP2Q9HC62 589 aa12.65□□□□□ -0.38
PFDN1-204ENST00000512707 ISY1Q9ULR0 285 aaKnown RBP12.65□□□□□ -0.38
PFDN1-204ENST00000512707 NID2Q14112 1375 aa12.65□□□□□ -0.38
PFDN1-204ENST00000512707 GREB1LQ9C091 1923 aaPredicted RBP12.64□□□□□ -0.39
PFDN1-204ENST00000512707 DOCK1Q14185 1865 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 POLR2AP24928 1970 aaKnown RBP12.64□□□□□ -0.39
PFDN1-204ENST00000512707 CELF2O95319 508 aaKnown RBP12.64□□□□□ -0.39
PFDN1-204ENST00000512707 PARP1P09874 1014 aaKnown RBP12.64□□□□□ -0.39
PFDN1-204ENST00000512707 PTPRAP18433 802 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 GUCY1A2P33402 732 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 CCT2P78371 535 aaKnown RBP12.64□□□□□ -0.39
PFDN1-204ENST00000512707 TROAPQ12815 778 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 CUL4AQ13619 759 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 VGLL4Q14135 290 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 CCDC96Q2M329 555 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 ASPRV1Q53RT3 343 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 GPATCH4Q5T3I0 446 aaKnown RBP12.64□□□□□ -0.39
PFDN1-204ENST00000512707 CLEC10AQ8IUN9 316 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 CCDC144CPQ8IYA2 1237 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 TRIM22Q8IYM9 498 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 NECAB1Q8N987 351 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 GMCL1P1Q8NEA9 526 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 DCAF4Q8WV16 495 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 LZTS2Q9BRK4 669 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 MYL10Q9BUA6 226 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 GBA2Q9HCG7 927 aaPredicted RBP12.64□□□□□ -0.39
PFDN1-204ENST00000512707 SMC3Q9UQE7 1217 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 MTMR7Q9Y216 660 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 TMX2Q9Y320 296 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 PAPPA2Q9BXP8 1791 aa12.64□□□□□ -0.39
PFDN1-204ENST00000512707 PASKQ96RG2 1323 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 USP17L10C9JJH3 530 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 LARGE1O95461 756 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 RXRAP19793 462 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 SLC1A4P43007 532 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 JAG1P78504 1218 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 HMGN5P82970 282 aaKnown RBP12.63□□□□□ -0.39
PFDN1-204ENST00000512707 AKAP17AQ02040 695 aaKnown RBP12.63□□□□□ -0.39
PFDN1-204ENST00000512707 SCRN1Q12765 414 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 GRM4Q14833 912 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 SHROOM1Q2M3G4 852 aaPredicted RBP12.63□□□□□ -0.39
PFDN1-204ENST00000512707 DLK2Q6UY11 383 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 ERO1BQ86YB8 467 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 RAB11FIP4Q86YS3 637 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 ZNF280CQ8ND82 737 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 SPOCK2Q92563 424 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 WDR18Q9BV38 432 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 KIAA1683Q9H0B3 1180 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 CWC22Q9HCG8 908 aaKnown RBP12.63□□□□□ -0.39
PFDN1-204ENST00000512707 HPS5Q9UPZ3 1129 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 ZHX2Q9Y6X8 837 aa12.63□□□□□ -0.39
PFDN1-204ENST00000512707 ATAD5Q96QE3 1844 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 C19orf81C9J6K1 198 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 F5H6K3 240 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 PPATQ06203 517 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 KLRC3Q07444 240 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms