RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 CRBNQ96SW2 442 aa19.51■□□□□ 0.71
LMNA-222ENST00000508500 NUDT12Q9BQG2 462 aa19.51■□□□□ 0.71
LMNA-222ENST00000508500 FARP2O94887 1054 aaPredicted RBP19.5■□□□□ 0.71
LMNA-222ENST00000508500 XRCC5P13010 732 aaKnown RBP19.5■□□□□ 0.71
LMNA-222ENST00000508500 CAPN2P17655 700 aa19.5■□□□□ 0.71
LMNA-222ENST00000508500 PLEKHH3Q7Z736 793 aa19.5■□□□□ 0.71
LMNA-222ENST00000508500 TMX2Q9Y320 296 aa19.5■□□□□ 0.71
LMNA-222ENST00000508500 RPTORQ8N122 1335 aa19.5■□□□□ 0.71
LMNA-222ENST00000508500 RNF113AO15541 343 aaKnown RBP19.49■□□□□ 0.71
LMNA-222ENST00000508500 TFRCP02786 760 aaKnown RBP19.49■□□□□ 0.71
LMNA-222ENST00000508500 MNX1P50219 401 aaPredicted RBP19.49■□□□□ 0.71
LMNA-222ENST00000508500 SOCS4Q8WXH5 440 aa19.49■□□□□ 0.71
LMNA-222ENST00000508500 APPBP2Q92624 585 aa19.49■□□□□ 0.71
LMNA-222ENST00000508500 DPF3Q92784 378 aa19.49■□□□□ 0.71
LMNA-222ENST00000508500 HTATIP2Q9BUP3 242 aa19.49■□□□□ 0.71
LMNA-222ENST00000508500 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.49■□□□□ 0.71
LMNA-222ENST00000508500 EPB41L4AQ9HCS5 686 aaPredicted RBP19.49■□□□□ 0.71
LMNA-222ENST00000508500 LAMA3Q16787 3333 aa19.49■□□□□ 0.71
LMNA-222ENST00000508500 SALL3Q9BXA9 1300 aa19.49■□□□□ 0.71
LMNA-222ENST00000508500 ZNF236Q9UL36 1845 aa19.48■□□□□ 0.71
LMNA-222ENST00000508500 M0R2C6 588 aa19.48■□□□□ 0.71
LMNA-222ENST00000508500 DIS3LQ8TF46 1054 aaKnown RBP19.48■□□□□ 0.71
LMNA-222ENST00000508500 CCDC17Q96LX7 622 aa19.48■□□□□ 0.71
LMNA-222ENST00000508500 HMX1Q9NP08 348 aaPredicted RBP19.48■□□□□ 0.71
LMNA-222ENST00000508500 TTC41PQ6P2S7 1318 aa19.48■□□□□ 0.71
LMNA-222ENST00000508500 PLXNA1Q9UIW2 1896 aa19.48■□□□□ 0.71
LMNA-222ENST00000508500 ICA1Q05084 483 aa19.47■□□□□ 0.71
LMNA-222ENST00000508500 COG2Q14746 738 aa19.47■□□□□ 0.71
LMNA-222ENST00000508500 SBK1Q52WX2 424 aa19.47■□□□□ 0.71
LMNA-222ENST00000508500 GPATCH3Q96I76 525 aa19.47■□□□□ 0.71
LMNA-222ENST00000508500 PAWRQ96IZ0 340 aaKnown RBP19.47■□□□□ 0.71
LMNA-222ENST00000508500 SEC62Q99442 399 aaKnown RBP19.47■□□□□ 0.71
LMNA-222ENST00000508500 FLRT1Q9NZU1 646 aa19.47■□□□□ 0.71
LMNA-222ENST00000508500 SMCHD1A6NHR9 2005 aa19.46■□□□□ 0.71
LMNA-222ENST00000508500 GPAA1O43292 621 aa19.46■□□□□ 0.71
LMNA-222ENST00000508500 EEF2P13639 858 aaKnown RBP19.46■□□□□ 0.71
LMNA-222ENST00000508500 PRKAR2AP13861 404 aaKnown RBP19.46■□□□□ 0.71
LMNA-222ENST00000508500 PTPREP23469 700 aa19.46■□□□□ 0.71
LMNA-222ENST00000508500 DSG3P32926 999 aa19.46■□□□□ 0.71
LMNA-222ENST00000508500 RGS2P41220 211 aa19.46■□□□□ 0.71
LMNA-222ENST00000508500 CACNB2Q08289 660 aaPredicted RBP19.46■□□□□ 0.71
LMNA-222ENST00000508500 MAP2K5Q13163 448 aa19.46■□□□□ 0.71
LMNA-222ENST00000508500 SPICE1Q8N0Z3 855 aa19.46■□□□□ 0.71
LMNA-222ENST00000508500 VCPKMTQ9H867 229 aa19.46■□□□□ 0.71
LMNA-222ENST00000508500 ARPP21Q9UBL0 812 aaPredicted RBP19.46■□□□□ 0.71
LMNA-222ENST00000508500 ROBO3Q96MS0 1386 aa19.45■□□□□ 0.7
LMNA-222ENST00000508500 RASA1P20936 1047 aa19.45■□□□□ 0.7
LMNA-222ENST00000508500 CCND3P30281 292 aaPredicted RBP19.45■□□□□ 0.7
LMNA-222ENST00000508500 GIMAP6Q6P9H5 292 aa19.45■□□□□ 0.7
LMNA-222ENST00000508500 CCAR1Q8IX12 1150 aaKnown RBP19.45■□□□□ 0.7
LMNA-222ENST00000508500 AMOTL1Q8IY63 956 aa19.45■□□□□ 0.7
LMNA-222ENST00000508500 STK11IPQ8N1F8 1099 aa19.45■□□□□ 0.7
LMNA-222ENST00000508500 DDRGK1Q96HY6 314 aa19.45■□□□□ 0.7
LMNA-222ENST00000508500 APBA2Q99767 749 aa19.45■□□□□ 0.7
LMNA-222ENST00000508500 MOV10L1Q9BXT6 1211 aaKnown RBP19.45■□□□□ 0.7
LMNA-222ENST00000508500 TANGO6Q9C0B7 1094 aa19.45■□□□□ 0.7
LMNA-222ENST00000508500 ARHGEF10LQ9HCE6 1279 aa19.45■□□□□ 0.7
LMNA-222ENST00000508500 IGHA2P01877 340 aa19.44■□□□□ 0.7
LMNA-222ENST00000508500 ZFYP08048 801 aaPredicted RBP19.44■□□□□ 0.7
LMNA-222ENST00000508500 ZKSCAN1P17029 563 aaPredicted RBP19.44■□□□□ 0.7
LMNA-222ENST00000508500 CCNA1P78396 465 aa19.44■□□□□ 0.7
LMNA-222ENST00000508500 GRB14Q14449 540 aa19.44■□□□□ 0.7
LMNA-222ENST00000508500 NPLOC4Q8TAT6 608 aa19.44■□□□□ 0.7
LMNA-222ENST00000508500 LPAR1Q92633 364 aa19.44■□□□□ 0.7
LMNA-222ENST00000508500 ATG4CQ96DT6 458 aa19.44■□□□□ 0.7
LMNA-222ENST00000508500 HOXC10Q9NYD6 342 aa19.44■□□□□ 0.7
LMNA-222ENST00000508500 OGDHLQ9ULD0 1010 aa19.44■□□□□ 0.7
LMNA-222ENST00000508500 COL6A3P12111 3177 aa19.44■□□□□ 0.7
LMNA-222ENST00000508500 SLC15A5A6NIM6 579 aa19.43■□□□□ 0.7
LMNA-222ENST00000508500 MINDY4BA8MYZ0 360 aa19.43■□□□□ 0.7
LMNA-222ENST00000508500 GLRX3O76003 335 aaKnown RBP19.43■□□□□ 0.7
LMNA-222ENST00000508500 WDR78Q5VTH9 848 aa19.43■□□□□ 0.7
LMNA-222ENST00000508500 LHX8Q68G74 356 aa19.43■□□□□ 0.7
LMNA-222ENST00000508500 TRMT44Q8IYL2 757 aaKnown RBP19.43■□□□□ 0.7
LMNA-222ENST00000508500 SPATC1LQ9H0A9 340 aa19.43■□□□□ 0.7
LMNA-222ENST00000508500 KANSL2Q9H9L4 492 aa19.43■□□□□ 0.7
LMNA-222ENST00000508500 NR2E3Q9Y5X4 410 aa19.43■□□□□ 0.7
LMNA-222ENST00000508500 A0A1W2PPC1 479 aa19.42■□□□□ 0.7
LMNA-222ENST00000508500 HOXC6P09630 235 aa19.42■□□□□ 0.7
LMNA-222ENST00000508500 MX1P20591 662 aa19.42■□□□□ 0.7
LMNA-222ENST00000508500 IFNL3Q8IZI9 196 aa19.42■□□□□ 0.7
LMNA-222ENST00000508500 ANKLE1Q8NAG6 615 aa19.42■□□□□ 0.7
LMNA-222ENST00000508500 FBXO28Q9NVF7 368 aa19.42■□□□□ 0.7
LMNA-222ENST00000508500 PATL2C9JE40 543 aaKnown RBP19.41■□□□□ 0.7
LMNA-222ENST00000508500 ERC2O15083 957 aa19.41■□□□□ 0.7
LMNA-222ENST00000508500 WDR46O15213 610 aaKnown RBP19.41■□□□□ 0.7
LMNA-222ENST00000508500 FOXP2O15409 715 aa19.41■□□□□ 0.7
LMNA-222ENST00000508500 FLOT1O75955 427 aa19.41■□□□□ 0.7
LMNA-222ENST00000508500 ERCC3P19447 782 aa19.41■□□□□ 0.7
LMNA-222ENST00000508500 ATP2B2Q01814 1243 aa19.41■□□□□ 0.7
LMNA-222ENST00000508500 ZMYM1Q5SVZ6 1142 aa19.41■□□□□ 0.7
LMNA-222ENST00000508500 ANKRD45Q5TZF3 282 aa19.41■□□□□ 0.7
LMNA-222ENST00000508500 SH2D4AQ9H788 454 aa19.41■□□□□ 0.7
LMNA-222ENST00000508500 CWC22Q9HCG8 908 aaKnown RBP19.41■□□□□ 0.7
LMNA-222ENST00000508500 ADAMTS5Q9UNA0 930 aa19.41■□□□□ 0.7
LMNA-222ENST00000508500 IGKV6D-41A0A0C4DH26 115 aa19.4■□□□□ 0.7
LMNA-222ENST00000508500 GNAT2P19087 354 aa19.4■□□□□ 0.7
LMNA-222ENST00000508500 HDAC1Q13547 482 aaPredicted RBP19.4■□□□□ 0.7
LMNA-222ENST00000508500 NECAB2Q7Z6G3 386 aa19.4■□□□□ 0.7
LMNA-222ENST00000508500 SHCBP1Q8NEM2 672 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms