RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 TANGO6Q9C0B7 1094 aa28.74■■■□□ 2.19
SRPK1-210ENST00000508473 VCPKMTQ9H867 229 aa28.74■■■□□ 2.19
SRPK1-210ENST00000508473 ERVK-9P63128 1117 aa28.73■■■□□ 2.19
SRPK1-210ENST00000508473 ERVK-24P63145 666 aa28.73■■■□□ 2.19
SRPK1-210ENST00000508473 CTDSPL2Q05D32 466 aa28.73■■■□□ 2.19
SRPK1-210ENST00000508473 PDE4BQ07343 736 aa28.73■■■□□ 2.19
SRPK1-210ENST00000508473 MGAMO43451 1857 aa28.72■■■□□ 2.19
SRPK1-210ENST00000508473 HTTP42858 3142 aa28.72■■■□□ 2.19
SRPK1-210ENST00000508473 RAD21O60216 631 aa28.72■■■□□ 2.19
SRPK1-210ENST00000508473 GRK4P32298 578 aa28.72■■■□□ 2.19
SRPK1-210ENST00000508473 INCENPQ9NQS7 918 aa28.72■■■□□ 2.19
SRPK1-210ENST00000508473 DIAPH3Q9NSV4 1193 aa28.72■■■□□ 2.19
SRPK1-210ENST00000508473 CCDC171Q6TFL3 1326 aa28.71■■■□□ 2.19
SRPK1-210ENST00000508473 POTEFA5A3E0 1075 aa28.71■■■□□ 2.19
SRPK1-210ENST00000508473 SPDYE16A6NNV3 312 aaPredicted RBP28.71■■■□□ 2.19
SRPK1-210ENST00000508473 CNMDO75829 334 aa28.71■■■□□ 2.19
SRPK1-210ENST00000508473 MLLT1Q03111 559 aaPredicted RBP28.71■■■□□ 2.19
SRPK1-210ENST00000508473 FAM47AQ5JRC9 791 aa28.71■■■□□ 2.19
SRPK1-210ENST00000508473 CWC27Q6UX04 472 aaKnown RBP28.71■■■□□ 2.19
SRPK1-210ENST00000508473 LPAR1Q92633 364 aa28.71■■■□□ 2.19
SRPK1-210ENST00000508473 HSPD1P10809 573 aaKnown RBP28.7■■■□□ 2.18
SRPK1-210ENST00000508473 ALX1Q15699 326 aa28.7■■■□□ 2.18
SRPK1-210ENST00000508473 TTC22Q5TAA0 569 aa28.7■■■□□ 2.18
SRPK1-210ENST00000508473 SAMD1Q6SPF0 538 aaPredicted RBP28.7■■■□□ 2.18
SRPK1-210ENST00000508473 BIN2Q9UBW5 565 aaPredicted RBP28.7■■■□□ 2.18
SRPK1-210ENST00000508473 RABGAP1Q9Y3P9 1069 aa28.7■■■□□ 2.18
SRPK1-210ENST00000508473 ADCY3O60266 1144 aa28.69■■■□□ 2.18
SRPK1-210ENST00000508473 FGAP02671 866 aa28.69■■■□□ 2.18
SRPK1-210ENST00000508473 GSPT1P15170 499 aaKnown RBP28.69■■■□□ 2.18
SRPK1-210ENST00000508473 COG2Q14746 738 aa28.69■■■□□ 2.18
SRPK1-210ENST00000508473 CCAR1Q8IX12 1150 aaKnown RBP28.69■■■□□ 2.18
SRPK1-210ENST00000508473 TMEM106CQ9BVX2 250 aa28.69■■■□□ 2.18
SRPK1-210ENST00000508473 PORCNQ9H237 461 aa28.69■■■□□ 2.18
SRPK1-210ENST00000508473 GOPCQ9HD26 462 aa28.69■■■□□ 2.18
SRPK1-210ENST00000508473 BTBD7Q9P203 1132 aa28.69■■■□□ 2.18
SRPK1-210ENST00000508473 IGKV6D-41A0A0C4DH26 115 aa28.68■■■□□ 2.18
SRPK1-210ENST00000508473 TSPY3P0CV98 308 aa28.68■■■□□ 2.18
SRPK1-210ENST00000508473 TSPY8P0CW00 308 aa28.68■■■□□ 2.18
SRPK1-210ENST00000508473 ELNP15502 786 aa28.68■■■□□ 2.18
SRPK1-210ENST00000508473 TFAP4Q01664 338 aa28.68■■■□□ 2.18
SRPK1-210ENST00000508473 CEP95Q96GE4 821 aa28.68■■■□□ 2.18
SRPK1-210ENST00000508473 NYAP2Q9P242 653 aa28.68■■■□□ 2.18
SRPK1-210ENST00000508473 CLIP2Q9UDT6 1046 aa28.68■■■□□ 2.18
SRPK1-210ENST00000508473 TACC3Q9Y6A5 838 aa28.68■■■□□ 2.18
SRPK1-210ENST00000508473 WDR46O15213 610 aaKnown RBP28.67■■■□□ 2.18
SRPK1-210ENST00000508473 FLOT1O75955 427 aa28.67■■■□□ 2.18
SRPK1-210ENST00000508473 LBX2Q6XYB7 198 aa28.67■■■□□ 2.18
SRPK1-210ENST00000508473 SLAIN1Q8ND83 568 aa28.67■■■□□ 2.18
SRPK1-210ENST00000508473 NEDD1Q8NHV4 660 aa28.67■■■□□ 2.18
SRPK1-210ENST00000508473 HOXC10Q9NYD6 342 aa28.67■■■□□ 2.18
SRPK1-210ENST00000508473 GJD2Q9UKL4 321 aa28.67■■■□□ 2.18
SRPK1-210ENST00000508473 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.67■■■□□ 2.18
SRPK1-210ENST00000508473 HIP1O00291 1037 aa28.66■■■□□ 2.18
SRPK1-210ENST00000508473 IRF5Q13568 498 aa28.66■■■□□ 2.18
SRPK1-210ENST00000508473 MTFR1Q15390 333 aa28.66■■■□□ 2.18
SRPK1-210ENST00000508473 ANAPC4Q9UJX5 808 aa28.66■■■□□ 2.18
SRPK1-210ENST00000508473 DOCK3Q8IZD9 2030 aa28.65■■■□□ 2.18
SRPK1-210ENST00000508473 GREB1LQ9C091 1923 aaPredicted RBP28.65■■■□□ 2.18
SRPK1-210ENST00000508473 MAPK4P31152 587 aa28.65■■■□□ 2.18
SRPK1-210ENST00000508473 DSG3P32926 999 aa28.65■■■□□ 2.18
SRPK1-210ENST00000508473 MFAP1P55081 439 aaKnown RBP28.65■■■□□ 2.18
SRPK1-210ENST00000508473 HAND2P61296 217 aa28.65■■■□□ 2.18
SRPK1-210ENST00000508473 FAM83BQ5T0W9 1011 aa28.65■■■□□ 2.18
SRPK1-210ENST00000508473 CWC22Q9HCG8 908 aaKnown RBP28.65■■■□□ 2.18
SRPK1-210ENST00000508473 MTMR4Q9NYA4 1195 aa28.65■■■□□ 2.18
SRPK1-210ENST00000508473 CCNA1P78396 465 aa28.64■■■□□ 2.18
SRPK1-210ENST00000508473 WDR78Q5VTH9 848 aa28.64■■■□□ 2.18
SRPK1-210ENST00000508473 GPR142Q7Z601 462 aa28.64■■■□□ 2.18
SRPK1-210ENST00000508473 LRRC47Q8N1G4 583 aaKnown RBP28.64■■■□□ 2.18
SRPK1-210ENST00000508473 ATG4CQ96DT6 458 aa28.64■■■□□ 2.18
SRPK1-210ENST00000508473 NUP88Q99567 741 aaPredicted RBP28.64■■■□□ 2.18
SRPK1-210ENST00000508473 FBXO28Q9NVF7 368 aa28.64■■■□□ 2.18
SRPK1-210ENST00000508473 TSPY2A6NKD2 308 aa28.63■■■□□ 2.17
SRPK1-210ENST00000508473 F5H6K3 240 aa28.63■■■□□ 2.17
SRPK1-210ENST00000508473 RANBP6O60518 1105 aaKnown RBP28.63■■■□□ 2.17
SRPK1-210ENST00000508473 EN2P19622 333 aaPredicted RBP28.63■■■□□ 2.17
SRPK1-210ENST00000508473 CYP2B6P20813 491 aa28.63■■■□□ 2.17
SRPK1-210ENST00000508473 UBXN2AP68543 259 aa28.63■■■□□ 2.17
SRPK1-210ENST00000508473 KLRC3Q07444 240 aa28.63■■■□□ 2.17
SRPK1-210ENST00000508473 PLEKHH3Q7Z736 793 aa28.63■■■□□ 2.17
SRPK1-210ENST00000508473 PXYLP1Q8TE99 480 aa28.63■■■□□ 2.17
SRPK1-210ENST00000508473 TOMM22Q9NS69 142 aa28.63■■■□□ 2.17
SRPK1-210ENST00000508473 PLIN4Q96Q06 1357 aa28.62■■■□□ 2.17
SRPK1-210ENST00000508473 KIAA0100Q14667 2235 aaKnown RBP28.62■■■□□ 2.17
SRPK1-210ENST00000508473 TTLL1O95922 423 aa28.62■■■□□ 2.17
SRPK1-210ENST00000508473 NDUFB10O96000 172 aa28.62■■■□□ 2.17
SRPK1-210ENST00000508473 RRP12Q5JTH9 1297 aaKnown RBP28.62■■■□□ 2.17
SRPK1-210ENST00000508473 NUDT12Q9BQG2 462 aa28.62■■■□□ 2.17
SRPK1-210ENST00000508473 INHAP05111 366 aa28.61■■■□□ 2.17
SRPK1-210ENST00000508473 ZMYM6O95789 1325 aa28.61■■■□□ 2.17
SRPK1-210ENST00000508473 NMT2O60551 498 aa28.6■■■□□ 2.17
SRPK1-210ENST00000508473 CCL5P13501 91 aa28.6■■■□□ 2.17
SRPK1-210ENST00000508473 PLS1Q14651 629 aa28.6■■■□□ 2.17
SRPK1-210ENST00000508473 SOCS4Q8WXH5 440 aa28.6■■■□□ 2.17
SRPK1-210ENST00000508473 MKL1Q969V6 931 aa28.6■■■□□ 2.17
SRPK1-210ENST00000508473 IL25Q9H293 177 aa28.6■■■□□ 2.17
SRPK1-210ENST00000508473 CENPFP49454 3210 aa28.6■■■□□ 2.17
SRPK1-210ENST00000508473 ORC4O43929 436 aa28.59■■■□□ 2.17
SRPK1-210ENST00000508473 MOV10L1Q9BXT6 1211 aaKnown RBP28.59■■■□□ 2.17
SRPK1-210ENST00000508473 SPATC1LQ9H0A9 340 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms