RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 CCT5P48643 541 aa17.9■□□□□ 0.46
SCLT1-208ENST00000506368 SART3Q15020 963 aaKnown RBP17.9■□□□□ 0.46
SCLT1-208ENST00000506368 STK11IPQ8N1F8 1099 aa17.9■□□□□ 0.46
SCLT1-208ENST00000506368 OSBP2Q969R2 916 aa17.9■□□□□ 0.46
SCLT1-208ENST00000506368 CABS1Q96KC9 395 aa17.9■□□□□ 0.46
SCLT1-208ENST00000506368 C5P01031 1676 aa17.9■□□□□ 0.46
SCLT1-208ENST00000506368 ARFGEF2Q9Y6D5 1785 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 SH2B2O14492 632 aaPredicted RBP17.89■□□□□ 0.45
SCLT1-208ENST00000506368 FOXN1O15353 648 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 HSP90AA4PQ58FG1 418 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 CCNI2Q6ZMN8 369 aaPredicted RBP17.89■□□□□ 0.45
SCLT1-208ENST00000506368 COPS6Q7L5N1 327 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 KRT27Q7Z3Y8 459 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 SGMS1Q86VZ5 419 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 ACRBPQ8NEB7 543 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 SELENOOQ9BVL4 669 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 KAT14Q9H8E8 782 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 FBXO3Q9UK99 471 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 FSBPO95073 299 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 CASP7P55210 303 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 ERVK-24P63145 666 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 KRT83P78385 493 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 ILDR2Q71H61 639 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 ATG9AQ7Z3C6 839 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 BCAS4Q8TDM0 211 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 SH3GL2Q99962 352 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 PYM1Q9BRP8 204 aaKnown RBP17.89■□□□□ 0.45
SCLT1-208ENST00000506368 GGA2Q9UJY4 613 aa17.89■□□□□ 0.45
SCLT1-208ENST00000506368 EPN1Q9Y6I3 576 aaPredicted RBP17.89■□□□□ 0.45
SCLT1-208ENST00000506368 MYO5AQ9Y4I1 1855 aaKnown RBP17.88■□□□□ 0.45
SCLT1-208ENST00000506368 TMCO5BA8MYB1 307 aa17.88■□□□□ 0.45
SCLT1-208ENST00000506368 C21orf2O43822 256 aa17.88■□□□□ 0.45
SCLT1-208ENST00000506368 KIAA0754O94854 1291 aa17.88■□□□□ 0.45
SCLT1-208ENST00000506368 BMP15O95972 392 aa17.88■□□□□ 0.45
SCLT1-208ENST00000506368 PRR29P0C7W0 189 aa17.88■□□□□ 0.45
SCLT1-208ENST00000506368 PHKG2P15735 406 aa17.88■□□□□ 0.45
SCLT1-208ENST00000506368 FXR1P51114 621 aaKnown RBP eCLIP17.88■□□□□ 0.45
SCLT1-208ENST00000506368 E2F4Q16254 413 aa17.88■□□□□ 0.45
SCLT1-208ENST00000506368 ALS2CLQ60I27 953 aa17.88■□□□□ 0.45
SCLT1-208ENST00000506368 NCAPH2Q6IBW4 605 aa17.88■□□□□ 0.45
SCLT1-208ENST00000506368 APOA5Q6Q788 366 aa17.88■□□□□ 0.45
SCLT1-208ENST00000506368 CPLX3Q8WVH0 158 aa17.88■□□□□ 0.45
SCLT1-208ENST00000506368 KAT2BQ92831 832 aa17.88■□□□□ 0.45
SCLT1-208ENST00000506368 SRRM3A6NNA2 597 aaPredicted RBP17.87■□□□□ 0.45
SCLT1-208ENST00000506368 ZBTB43O43298 467 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 NDUFA10O95299 355 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 MMP1P03956 469 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 LIG3P49916 1009 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 SSRP1Q08945 709 aaKnown RBP17.87■□□□□ 0.45
SCLT1-208ENST00000506368 PLCB4Q15147 1175 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 NTRK3Q16288 839 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 AATFQ9NY61 560 aaKnown RBP eCLIP17.87■□□□□ 0.45
SCLT1-208ENST00000506368 PCDH11XQ9BZA7 1347 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 PCDH11YQ9BZA8 1340 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 A0A087WZG4 1122 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 PRAMEF22A3QJZ6 481 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 AGPSO00116 658 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 FMNL1O95466 1100 aaPredicted RBP17.87■□□□□ 0.45
SCLT1-208ENST00000506368 APBA1Q02410 837 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 ZNF790Q6PG37 636 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 SH3RF1Q7Z6J0 888 aa17.87■□□□□ 0.45
SCLT1-208ENST00000506368 AENQ8WTP8 325 aaKnown RBP17.87■□□□□ 0.45
SCLT1-208ENST00000506368 SECISBP2LQ93073 1101 aaKnown RBP17.87■□□□□ 0.45
SCLT1-208ENST00000506368 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.457e-6■■□□□ 12.8
SCLT1-208ENST00000506368 FOXP2O15409 715 aa17.86■□□□□ 0.45
SCLT1-208ENST00000506368 KRT86O43790 486 aa17.86■□□□□ 0.45
SCLT1-208ENST00000506368 LIFRP42702 1097 aa17.86■□□□□ 0.45
SCLT1-208ENST00000506368 PTF1AQ7RTS3 328 aa17.86■□□□□ 0.45
SCLT1-208ENST00000506368 NUP88Q99567 741 aaPredicted RBP17.86■□□□□ 0.45
SCLT1-208ENST00000506368 TOGARAM1Q9Y4F4 1720 aa17.86■□□□□ 0.45
SCLT1-208ENST00000506368 GRIN2DO15399 1336 aa17.86■□□□□ 0.45
SCLT1-208ENST00000506368 EYA2O00167 538 aa17.86■□□□□ 0.45
SCLT1-208ENST00000506368 APPP05067 770 aa17.86■□□□□ 0.45
SCLT1-208ENST00000506368 HAND2P61296 217 aa17.86■□□□□ 0.45
SCLT1-208ENST00000506368 TSR1Q2NL82 804 aaKnown RBP17.86■□□□□ 0.45
SCLT1-208ENST00000506368 ZNF572Q7Z3I7 529 aaPredicted RBP17.86■□□□□ 0.45
SCLT1-208ENST00000506368 IFNL2Q8IZJ0 200 aa17.86■□□□□ 0.45
SCLT1-208ENST00000506368 ACSBG1Q96GR2 724 aa17.86■□□□□ 0.45
SCLT1-208ENST00000506368 UBN2Q6ZU65 1347 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 MYH7P12883 1935 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 A0A0U1RQJ8 604 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 ANKRD65E5RJM6 399 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 N4BP3O15049 544 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 IFNAR1P17181 557 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 DRP2Q13474 957 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 ZNF827Q17R98 1081 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 EMBQ6PCB8 327 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 KCNV1Q6PIU1 500 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 LMBR1LQ6UX01 489 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 MMGT1Q8N4V1 131 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 ATRIPQ8WXE1 791 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 XAGE2Q96GT9 111 aa17.85■□□□□ 0.45
SCLT1-208ENST00000506368 GOLGA8AA7E2F4 631 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 CHUKO15111 745 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 RCAN1P53805 252 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 GNGT1P63211 74 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 NNTQ13423 1086 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 EMC10Q5UCC4 262 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 LRP10Q7Z4F1 713 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 TRIM22Q8IYM9 498 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms