RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 FKBP1AP62942 108 aaKnown RBP28.43■■■□□ 2.14
DHFR-203ENST00000505337 PTPAQ15257 358 aa28.43■■■□□ 2.14
DHFR-203ENST00000505337 HHIPL2Q6UWX4 724 aa28.43■■■□□ 2.14
DHFR-203ENST00000505337 ZNF444Q8N0Y2 327 aaPredicted RBP28.43■■■□□ 2.14
DHFR-203ENST00000505337 TAOK2Q9UL54 1235 aa28.43■■■□□ 2.14
DHFR-203ENST00000505337 PLIN4Q96Q06 1357 aa28.43■■■□□ 2.14
DHFR-203ENST00000505337 G3V3G9 751 aa28.43■■■□□ 2.14
DHFR-203ENST00000505337 SF3A1Q15459 793 aaKnown RBP28.43■■■□□ 2.14
DHFR-203ENST00000505337 UVSSAQ2YD98 709 aa28.43■■■□□ 2.14
DHFR-203ENST00000505337 DCAF8Q5TAQ9 597 aa28.43■■■□□ 2.14
DHFR-203ENST00000505337 SRBD1Q8N5C6 995 aaKnown RBP28.43■■■□□ 2.14
DHFR-203ENST00000505337 SCN4AP35499 1836 aa28.42■■■□□ 2.14
DHFR-203ENST00000505337 IQCA1LA6NCM1 817 aa28.42■■■□□ 2.14
DHFR-203ENST00000505337 USP17L3A6NCW0 530 aa28.42■■■□□ 2.14
DHFR-203ENST00000505337 USP17L4A6NCW7 530 aa28.42■■■□□ 2.14
DHFR-203ENST00000505337 AXDND1Q5T1B0 1012 aaPredicted RBP28.42■■■□□ 2.14
DHFR-203ENST00000505337 USP17L1Q7RTZ2 530 aa28.42■■■□□ 2.14
DHFR-203ENST00000505337 PNMA1Q8ND90 353 aa28.42■■■□□ 2.14
DHFR-203ENST00000505337 PPP6R2O75170 966 aa28.41■■■□□ 2.14
DHFR-203ENST00000505337 WDHD1O75717 1129 aaPredicted RBP28.41■■■□□ 2.14
DHFR-203ENST00000505337 PHF20Q9BVI0 1012 aa28.41■■■□□ 2.14
DHFR-203ENST00000505337 MYH4Q9Y623 1939 aa28.41■■■□□ 2.14
DHFR-203ENST00000505337 ECE2O60344 883 aa28.4■■■□□ 2.14
DHFR-203ENST00000505337 XBP1P17861 261 aa28.4■■■□□ 2.14
DHFR-203ENST00000505337 KIF5BP33176 963 aa28.4■■■□□ 2.14
DHFR-203ENST00000505337 TYRO3Q06418 890 aa28.4■■■□□ 2.14
DHFR-203ENST00000505337 CKAP2LQ8IYA6 745 aa28.4■■■□□ 2.14
DHFR-203ENST00000505337 FMR1NBQ8N0W7 255 aaPredicted RBP28.4■■■□□ 2.14
DHFR-203ENST00000505337 TAF1DQ9H5J8 278 aaPredicted RBP28.4■■■□□ 2.14
DHFR-203ENST00000505337 V9GY48 417 aaPredicted RBP28.4■■■□□ 2.14
DHFR-203ENST00000505337 RAD17O75943 681 aa28.4■■■□□ 2.14
DHFR-203ENST00000505337 POTEIP0CG38 1075 aa28.4■■■□□ 2.14
DHFR-203ENST00000505337 POTEJP0CG39 1038 aa28.4■■■□□ 2.14
DHFR-203ENST00000505337 GRM4Q14833 912 aa28.4■■■□□ 2.14
DHFR-203ENST00000505337 STRIP1Q5VSL9 837 aa28.4■■■□□ 2.14
DHFR-203ENST00000505337 NEDD1Q8NHV4 660 aa28.4■■■□□ 2.14
DHFR-203ENST00000505337 TEKT1Q969V4 418 aa28.4■■■□□ 2.14
DHFR-203ENST00000505337 DDX4Q9NQI0 724 aaKnown RBP28.4■■■□□ 2.14
DHFR-203ENST00000505337 VPS54Q9P1Q0 977 aa28.4■■■□□ 2.14
DHFR-203ENST00000505337 CTAGE5O15320 804 aa28.39■■■□□ 2.14
DHFR-203ENST00000505337 SCNN1DP51172 638 aa28.39■■■□□ 2.14
DHFR-203ENST00000505337 DACT2Q5SW24 774 aa28.39■■■□□ 2.14
DHFR-203ENST00000505337 KCNQ5Q9NR82 932 aa28.39■■■□□ 2.14
DHFR-203ENST00000505337 HACL1Q9UJ83 578 aa28.39■■■□□ 2.14
DHFR-203ENST00000505337 MRVI1Q9Y6F6 885 aa28.39■■■□□ 2.14
DHFR-203ENST00000505337 TOB1P50616 345 aaPredicted RBP28.38■■■□□ 2.13
DHFR-203ENST00000505337 GABPAQ06546 454 aa28.38■■■□□ 2.13
DHFR-203ENST00000505337 NR5A1Q13285 461 aa28.38■■■□□ 2.13
DHFR-203ENST00000505337 CIAPIN1Q6FI81 312 aa28.38■■■□□ 2.13
DHFR-203ENST00000505337 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.38■■■□□ 2.13
DHFR-203ENST00000505337 KINO60870 393 aaKnown RBP28.38■■■□□ 2.13
DHFR-203ENST00000505337 NOVP48745 357 aa28.38■■■□□ 2.13
DHFR-203ENST00000505337 FSTL1Q12841 308 aa28.38■■■□□ 2.13
DHFR-203ENST00000505337 RILPL1Q5EBL4 403 aa28.38■■■□□ 2.13
DHFR-203ENST00000505337 APOBEC3HQ6NTF7 200 aaKnown RBP28.38■■■□□ 2.13
DHFR-203ENST00000505337 JMYQ8N9B5 988 aa28.38■■■□□ 2.13
DHFR-203ENST00000505337 OXER1Q8TDS5 423 aa28.38■■■□□ 2.13
DHFR-203ENST00000505337 hCG_1642624A0A1W2PR95 340 aa28.37■■■□□ 2.13
DHFR-203ENST00000505337 CDC42EP5Q6NZY7 148 aa28.37■■■□□ 2.13
DHFR-203ENST00000505337 SMC1BQ8NDV3 1235 aa28.37■■■□□ 2.13
DHFR-203ENST00000505337 ZDHHC15Q96MV8 337 aa28.37■■■□□ 2.13
DHFR-203ENST00000505337 TMEM47Q9BQJ4 181 aa28.37■■■□□ 2.13
DHFR-203ENST00000505337 MRIQ9BWK5 157 aa28.37■■■□□ 2.13
DHFR-203ENST00000505337 CMA1P23946 247 aa28.36■■■□□ 2.13
DHFR-203ENST00000505337 EPHX2P34913 555 aa28.36■■■□□ 2.13
DHFR-203ENST00000505337 CRKP46108 304 aa28.36■■■□□ 2.13
DHFR-203ENST00000505337 NDUFA8P51970 172 aa28.36■■■□□ 2.13
DHFR-203ENST00000505337 PICALMQ13492 652 aa28.36■■■□□ 2.13
DHFR-203ENST00000505337 NPY5RQ15761 445 aa28.36■■■□□ 2.13
DHFR-203ENST00000505337 USP40Q9NVE5 1235 aa28.36■■■□□ 2.13
DHFR-203ENST00000505337 A0A1B0GVL5 298 aa28.35■■■□□ 2.13
DHFR-203ENST00000505337 SCG2P13521 617 aa28.35■■■□□ 2.13
DHFR-203ENST00000505337 HSPA6P17066 643 aa28.35■■■□□ 2.13
DHFR-203ENST00000505337 PFKFB3Q16875 520 aaPredicted RBP28.35■■■□□ 2.13
DHFR-203ENST00000505337 MAD2L2Q9UI95 211 aa28.35■■■□□ 2.13
DHFR-203ENST00000505337 MYO3BQ8WXR4 1341 aa28.35■■■□□ 2.13
DHFR-203ENST00000505337 MARCKSP29966 332 aaPredicted RBP28.35■■■□□ 2.13
DHFR-203ENST00000505337 KRT2P35908 639 aa28.35■■■□□ 2.13
DHFR-203ENST00000505337 EPS15P42566 896 aa28.35■■■□□ 2.13
DHFR-203ENST00000505337 HDLBPQ00341 1268 aaKnown RBP28.35■■■□□ 2.13
DHFR-203ENST00000505337 TNIP1Q15025 636 aa28.35■■■□□ 2.13
DHFR-203ENST00000505337 OSBPL5Q9H0X9 879 aaPredicted RBP28.35■■■□□ 2.13
DHFR-203ENST00000505337 FAM200AQ8TCP9 573 aa28.34■■■□□ 2.13
DHFR-203ENST00000505337 TNFRSF25Q93038 417 aa28.34■■■□□ 2.13
DHFR-203ENST00000505337 STX8Q9UNK0 236 aa28.34■■■□□ 2.13
DHFR-203ENST00000505337 CEP350Q5VT06 3117 aa28.34■■■□□ 2.13
DHFR-203ENST00000505337 FAM237AA0A1B0GTK4 181 aa28.33■■■□□ 2.13
DHFR-203ENST00000505337 PSMD14O00487 310 aa28.33■■■□□ 2.13
DHFR-203ENST00000505337 GMPSP49915 693 aaPredicted RBP28.33■■■□□ 2.13
DHFR-203ENST00000505337 GNAQP50148 359 aa28.33■■■□□ 2.13
DHFR-203ENST00000505337 STAG2Q8N3U4 1231 aa28.33■■■□□ 2.13
DHFR-203ENST00000505337 PFKFB1P16118 471 aa28.32■■■□□ 2.12
DHFR-203ENST00000505337 MORC2Q9Y6X9 1032 aaPredicted RBP28.32■■■□□ 2.12
DHFR-203ENST00000505337 LMOD1P29536 600 aaPredicted RBP28.32■■■□□ 2.12
DHFR-203ENST00000505337 SASS6Q6UVJ0 657 aa28.32■■■□□ 2.12
DHFR-203ENST00000505337 KIAA0825Q8IV33 1275 aa28.32■■■□□ 2.12
DHFR-203ENST00000505337 TRIM44Q96DX7 344 aaPredicted RBP28.32■■■□□ 2.12
DHFR-203ENST00000505337 CEP95Q96GE4 821 aa28.32■■■□□ 2.12
DHFR-203ENST00000505337 GPRC5DQ9NZD1 345 aa28.32■■■□□ 2.12
DHFR-203ENST00000505337 HPSEQ9Y251 543 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms