RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 ENAHQ8N8S7 591 aaPredicted RBP10.94□□□□□ -0.66
TPM3-218ENST00000505010 SLC17A8Q8NDX2 589 aa10.94□□□□□ -0.66
TPM3-218ENST00000505010 ARMC5Q96C12 935 aa10.94□□□□□ -0.66
TPM3-218ENST00000505010 ZNF274Q96GC6 653 aaPredicted RBP10.94□□□□□ -0.66
TPM3-218ENST00000505010 MTA3Q9BTC8 594 aa10.94□□□□□ -0.66
TPM3-218ENST00000505010 NCOA5Q9HCD5 579 aaKnown RBP10.94□□□□□ -0.66
TPM3-218ENST00000505010 CHMP5Q9NZZ3 219 aa10.94□□□□□ -0.66
TPM3-218ENST00000505010 SLC12A7Q9Y666 1083 aa10.94□□□□□ -0.66
TPM3-218ENST00000505010 FAM196BA6NMK8 535 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 GOLGA8AA7E2F4 631 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 ZBTB43O43298 467 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 RXRAP19793 462 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 SHMT1P34896 483 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 DDIT3P35638 169 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 TNNI2P48788 182 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 METAP2P50579 478 aaKnown RBP eCLIP10.93□□□□□ -0.66
TPM3-218ENST00000505010 EVCP57679 992 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 GABPAQ06546 454 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 SEC23AQ15436 765 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 LDLRAD1Q5T700 205 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 FKBP1CQ5VVH2 108 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 APOA5Q6Q788 366 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 ZNF654Q8IZM8 581 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 FAM151AQ8WW52 585 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 SLC10A4Q96EP9 437 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 MYL10Q9BUA6 226 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 EFCC1Q9HA90 598 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 CWC22Q9HCG8 908 aaKnown RBP10.93□□□□□ -0.66
TPM3-218ENST00000505010 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.93□□□□□ -0.66
TPM3-218ENST00000505010 PI4KBQ9UBF8 816 aa10.93□□□□□ -0.66
TPM3-218ENST00000505010 CIZ1Q9ULV3 898 aaPredicted RBP10.93□□□□□ -0.66
TPM3-218ENST00000505010 TRIOBPQ9H2D6 2365 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 PLIN4Q96Q06 1357 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 H0YGN5 161 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 MPHOSPH10O00566 681 aaKnown RBP10.92□□□□□ -0.66
TPM3-218ENST00000505010 DTNBO60941 627 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 AKR1B1P15121 316 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 GJB2P29033 226 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 TNFAIP1Q13829 316 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 CCDC178Q5BJE1 867 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 OTUD7BQ6GQQ9 843 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 NBPF11Q86T75 865 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 FAM83AQ86UY5 434 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 CCDC144CPQ8IYA2 1237 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 TMTC2Q8N394 836 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 CD99L2Q8TCZ2 262 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 NUP133Q8WUM0 1156 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 TMEM39BQ9GZU3 492 aa10.92□□□□□ -0.66
TPM3-218ENST00000505010 RANBP2P49792 3224 aaKnown RBP10.92□□□□□ -0.66
TPM3-218ENST00000505010 NID2Q14112 1375 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 COL6A3P12111 3177 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 CPLX1O14810 134 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 DHX16O60231 1041 aaKnown RBP10.91□□□□□ -0.66
TPM3-218ENST00000505010 JAK2O60674 1132 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 SLURP2P0DP57 97 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 ZBTB48P10074 688 aaPredicted RBP10.91□□□□□ -0.66
TPM3-218ENST00000505010 SP3Q02447 781 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 RTN1Q16799 776 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 CATIPQ7Z7H3 387 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 APOBEC3FQ8IUX4 373 aaKnown RBP10.91□□□□□ -0.66
TPM3-218ENST00000505010 FOXP4Q8IVH2 680 aaPredicted RBP10.91□□□□□ -0.66
TPM3-218ENST00000505010 NEDD1Q8NHV4 660 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 CHMP4CQ96CF2 233 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 DDX11Q96FC9 970 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 OTUD5Q96G74 571 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 LLPHQ9BRT6 129 aaKnown RBP10.91□□□□□ -0.66
TPM3-218ENST00000505010 DNAJC18Q9H819 358 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 KAT14Q9H8E8 782 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 IL17RBQ9NRM6 502 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 STX8Q9UNK0 236 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 MYH15Q9Y2K3 1946 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 DOCK1Q14185 1865 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 CEP290O15078 2479 aa10.91□□□□□ -0.66
TPM3-218ENST00000505010 PTPDC1A2A3K4 754 aa10.9□□□□□ -0.66
TPM3-218ENST00000505010 IGF2BP3O00425 579 aaKnown RBP eCLIP10.9□□□□□ -0.66
TPM3-218ENST00000505010 DDAH1O94760 285 aa10.9□□□□□ -0.66
TPM3-218ENST00000505010 RASA3Q14644 834 aa10.9□□□□□ -0.66
TPM3-218ENST00000505010 ARHGEF6Q15052 776 aa10.9□□□□□ -0.66
TPM3-218ENST00000505010 RCSD1Q6JBY9 416 aa10.9□□□□□ -0.66
TPM3-218ENST00000505010 CHRDL2Q6WN34 429 aa10.9□□□□□ -0.66
TPM3-218ENST00000505010 CDAN1Q8IWY9 1227 aa10.9□□□□□ -0.66
TPM3-218ENST00000505010 NSUN7Q8NE18 718 aaKnown RBP10.9□□□□□ -0.66
TPM3-218ENST00000505010 ZNF333Q96JL9 665 aa10.9□□□□□ -0.66
TPM3-218ENST00000505010 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.9□□□□□ -0.66
TPM3-218ENST00000505010 TCP11L1Q9NUJ3 509 aa10.9□□□□□ -0.66
TPM3-218ENST00000505010 HERC5Q9UII4 1024 aaKnown RBP10.9□□□□□ -0.66
TPM3-218ENST00000505010 PPP1R12BO60237 982 aaPredicted RBP10.89□□□□□ -0.67
TPM3-218ENST00000505010 CDKL5O76039 1030 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 GDF11O95390 407 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 CTDNEP1O95476 244 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 CALM1P0DP23 149 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 CALM2P0DP24 149 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 CALM3P0DP25 149 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 RCAN1P53805 252 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 NUCB2P80303 420 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 HMGN5P82970 282 aaKnown RBP10.89□□□□□ -0.67
TPM3-218ENST00000505010 CRHR2Q13324 411 aa10.89□□□□□ -0.67
TPM3-218ENST00000505010 CERKLQ49MI3 558 aaPredicted RBP10.89□□□□□ -0.67
TPM3-218ENST00000505010 SLC9C1Q4G0N8 1177 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms