RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 ARMC9Q7Z3E5 817 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 DGKHQ86XP1 1220 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 NCOA7Q8NI08 942 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 TCEANC2Q96MN5 208 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 NEK1Q96PY6 1258 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 TMEM47Q9BQJ4 181 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 ZKSCAN3Q9BRR0 538 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 C22orf23Q9BZE7 217 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 KRT23Q9C075 422 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 RNF41Q9H4P4 317 aaPredicted RBP5.84□□□□□ -1.47
LMNB1-208ENST00000504788 CNNM2Q9H8M5 875 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 KANSL2Q9H9L4 492 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 LY9Q9HBG7 655 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 SYNPO2Q9UMS6 1093 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 ZHX2Q9Y6X8 837 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 ZSWIM8A7E2V4 1837 aa5.84□□□□□ -1.47
LMNB1-208ENST00000504788 BAZ2BQ9UIF8 2168 aaKnown RBP5.84□□□□□ -1.48
LMNB1-208ENST00000504788 TNKSO95271 1327 aa5.84□□□□□ -1.48
LMNB1-208ENST00000504788 ADGRA2Q96PE1 1338 aa5.84□□□□□ -1.48
LMNB1-208ENST00000504788 LCTP09848 1927 aa5.84□□□□□ -1.48
LMNB1-208ENST00000504788 USP17L5A8MUK1 530 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 IGF2BP3O00425 579 aaKnown RBP eCLIP5.83□□□□□ -1.48
LMNB1-208ENST00000504788 CXCL11O14625 94 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 RPS6KB1P23443 525 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 LIFRP42702 1097 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 ICA1Q05084 483 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 SPP2Q13103 211 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 CYP4F22Q6NT55 531 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 RUFY3Q7L099 469 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 DHX32Q7L7V1 743 aaKnown RBP5.83□□□□□ -1.48
LMNB1-208ENST00000504788 ZNF280CQ8ND82 737 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 BRI3BPQ8WY22 251 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 ESR2Q92731 530 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 ZSCAN10Q96SZ4 725 aaPredicted RBP5.83□□□□□ -1.48
LMNB1-208ENST00000504788 UPF3BQ9BZI7 483 aaKnown RBP5.83□□□□□ -1.48
LMNB1-208ENST00000504788 MKNK2Q9HBH9 465 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 FAM217BQ9NTX9 383 aaPredicted RBP5.83□□□□□ -1.48
LMNB1-208ENST00000504788 BRPF3Q9ULD4 1205 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 HPS5Q9UPZ3 1129 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 PLXNB2O15031 1838 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 MYH6P13533 1939 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 DOCK3Q8IZD9 2030 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 TSPY2A6NKD2 308 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 PRC1O43663 620 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 RANBP6O60518 1105 aaKnown RBP5.83□□□□□ -1.48
LMNB1-208ENST00000504788 TTLL1O95922 423 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 SLC3A2P08195 630 aaKnown RBP5.83□□□□□ -1.48
LMNB1-208ENST00000504788 TSPY3P0CV98 308 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 TSPY8P0CW00 308 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 HOXA7P31268 230 aaPredicted RBP5.83□□□□□ -1.48
LMNB1-208ENST00000504788 TM4SF4P48230 202 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 VEGFBP49765 207 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 FUT2Q10981 343 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 MTMR2Q13614 643 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 KRT32Q14532 448 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 RAB3GAP1Q15042 981 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 DEFB115Q30KQ5 88 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 TREML2Q5T2D2 321 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 RNF20Q5VTR2 975 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 AMOTL1Q8IY63 956 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 ZNF444Q8N0Y2 327 aaPredicted RBP5.83□□□□□ -1.48
LMNB1-208ENST00000504788 GMCL1P1Q8NEA9 526 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 MS4A3Q96HJ5 214 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 JAKMIP1Q96N16 626 aaKnown RBP5.83□□□□□ -1.48
LMNB1-208ENST00000504788 LRRC2Q9BYS8 371 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 TBC1D2Q9BYX2 928 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 VCPKMTQ9H867 229 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 ZNF287Q9HBT7 754 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 ADAMTS5Q9UNA0 930 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 CSADQ9Y600 493 aa5.83□□□□□ -1.48
LMNB1-208ENST00000504788 MGAMO43451 1857 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 TRIM75PA6NK02 468 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 USP17L10C9JJH3 530 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 F5H6K3 240 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 CYTH3O43739 400 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 AOC2O75106 756 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 NDUFB10O96000 172 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 PDHBP11177 359 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 ZKSCAN1P17029 563 aaPredicted RBP5.82□□□□□ -1.48
LMNB1-208ENST00000504788 VCAM1P19320 739 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 CASTP20810 708 aaKnown RBP5.82□□□□□ -1.48
LMNB1-208ENST00000504788 MCM5P33992 734 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 ZNF157P51786 506 aaPredicted RBP5.82□□□□□ -1.48
LMNB1-208ENST00000504788 CAP1Q01518 475 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 KLRC3Q07444 240 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 NTRK3Q16288 839 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 RRP12Q5JTH9 1297 aaKnown RBP5.82□□□□□ -1.48
LMNB1-208ENST00000504788 LRRC47Q8N1G4 583 aaKnown RBP5.82□□□□□ -1.48
LMNB1-208ENST00000504788 FAM43AQ8N2R8 423 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 PROCA1Q8NCQ7 364 aaPredicted RBP5.82□□□□□ -1.48
LMNB1-208ENST00000504788 SLC10A4Q96EP9 437 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 GMCL1Q96IK5 515 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 TMEM87BQ96K49 555 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 CAPNS2Q96L46 248 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 CFHR5Q9BXR6 569 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 CLIP2Q9UDT6 1046 aa5.82□□□□□ -1.48
LMNB1-208ENST00000504788 WDR33Q9C0J8 1336 aaKnown RBP5.82□□□□□ -1.48
LMNB1-208ENST00000504788 PALM3A6NDB9 673 aaPredicted RBP5.81□□□□□ -1.48
LMNB1-208ENST00000504788 C19orf81C9J6K1 198 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 BTBD19C9JJ37 291 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms