RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	POLR2A	P24928	1970 aa	Known RBP	14.22	□□□□□ -0.13
MATR3-231	ENST00000502394	CDC27	P30260	824 aa		14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	NTRK3	Q16288	839 aa		14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	ABCB5	Q2M3G0	1257 aa		14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	NFXL1	Q6ZNB6	911 aa		14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	MIGA2	Q7L4E1	593 aa		14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	PNMA8A	Q86V59	439 aa	Predicted RBP	14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	SIAH1	Q8IUQ4	282 aa		14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	SPRYD3	Q8NCJ5	442 aa		14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	NSUN7	Q8NE18	718 aa	Known RBP	14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	FBXO22	Q8NEZ5	403 aa		14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	DCPS	Q96C86	337 aa	Known RBP	14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	MAP3K14	Q99558	947 aa		14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	LLPH	Q9BRT6	129 aa	Known RBP	14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	MYL10	Q9BUA6	226 aa		14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	NCOA5	Q9HCD5	579 aa	Known RBP	14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	NYAP2	Q9P242	653 aa		14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	14.21	□□□□□ -0.13
MATR3-231	ENST00000502394	GOLGA8A	A7E2F4	631 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	ADM5	C9JUS6	153 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	GDF11	O95390	407 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	TOP1	P11387	765 aa	Known RBP	14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	CAP2	P40123	477 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	METAP2	P50579	478 aa	Known RBP eCLIP	14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	CCT2	P78371	535 aa	Known RBP	14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	SEPT2	Q15019	361 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	PPP4R3B	Q5MIZ7	849 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	MICU3	Q86XE3	530 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	RAB11FIP4	Q86YS3	637 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	CLEC10A	Q8IUN9	316 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	PNMA1	Q8ND90	353 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	MKL1	Q969V6	931 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	HOOK2	Q96ED9	719 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	KANSL2	Q9H9L4	492 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	CWC22	Q9HCG8	908 aa	Known RBP	14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	GINM1	Q9NU53	330 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	ZBTB21	Q9ULJ3	1066 aa		14.2	□□□□□ -0.14
MATR3-231	ENST00000502394	PAPPA2	Q9BXP8	1791 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	TTLL1	O95922	423 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	GH2	P01242	217 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	CALM1	P0DP23	149 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	CALM2	P0DP24	149 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	CALM3	P0DP25	149 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	SNHG28	P0DPA3	235 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	RXRA	P19793	462 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	ADD1	P35611	737 aa	Known RBP	14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	PPP2R5B	Q15173	497 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	PRAMEF18	Q5VWM3	479 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	DCAF15	Q66K64	600 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	SYNE3	Q6ZMZ3	975 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	CATIP	Q7Z7H3	387 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	SULF1	Q8IWU6	871 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	FANCB	Q8NB91	859 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	CHMP4C	Q96CF2	233 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	MFRP	Q9BY79	579 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	ZNF341	Q9BYN7	854 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	KAT14	Q9H8E8	782 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	STX8	Q9UNK0	236 aa		14.19	□□□□□ -0.14
MATR3-231	ENST00000502394	MPHOSPH10	O00566	681 aa	Known RBP	14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	JAK2	O60674	1132 aa		14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	HSP90AA1	P07900	732 aa	Known RBP	14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	VEGFA	P15692	232 aa	Predicted RBP	14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	FUT2	Q10981	343 aa		14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	GRM4	Q14833	912 aa		14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	RTN1	Q16799	776 aa		14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	SUPT20HL1	Q3ZLR7	823 aa		14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	KRT26	Q7Z3Y9	468 aa		14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	HS6ST3	Q8IZP7	471 aa		14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	CABP5	Q9NP86	173 aa		14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	NAP1L2	Q9ULW6	460 aa	Predicted RBP	14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	SYNPO2	Q9UMS6	1093 aa		14.18	□□□□□ -0.14
MATR3-231	ENST00000502394	PTPDC1	A2A3K4	754 aa		14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	DHX16	O60231	1041 aa	Known RBP	14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	CTNND1	O60716	968 aa	Known RBP	14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	EEF2	P13639	858 aa	Known RBP	14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	FDPS	P14324	419 aa	Known RBP	14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	IFNAR1	P17181	557 aa		14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	ICA1	Q05084	483 aa		14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	EAPP	Q56P03	285 aa	Predicted RBP	14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	NOL9	Q5SY16	702 aa	Known RBP	14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	DLK2	Q6UY11	383 aa		14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	KLRG1	Q96E93	195 aa		14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	RRAGC	Q9HB90	399 aa		14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	RBM28	Q9NW13	759 aa	Known RBP	14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	CLIP2	Q9UDT6	1046 aa		14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	SMC3	Q9UQE7	1217 aa		14.17	□□□□□ -0.14
MATR3-231	ENST00000502394	CCDC196	A0A1B0GTZ2	297 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394		A0A1W2PRG0	241 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	PALM3	A6NDB9	673 aa	Predicted RBP	14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	DTNB	O60941	627 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	USP2	O75604	605 aa	Predicted RBP	14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	ASNS	P08243	561 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	GJB2	P29033	226 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	INPP5B	P32019	993 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	HMGN5	P82970	282 aa	Known RBP	14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	TMTC3	Q6ZXV5	915 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	CDC37L1	Q7L3B6	337 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	NBPF11	Q86T75	865 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	USP48	Q86UV5	1035 aa		14.16	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms