RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 FBXO18Q8NFZ0 1043 aa8.24□□□□□ -1.09
GPATCH4-209ENST00000498641 PIBF1Q8WXW3 757 aa8.24□□□□□ -1.09
GPATCH4-209ENST00000498641 CHAMP1Q96JM3 812 aa8.24□□□□□ -1.09
GPATCH4-209ENST00000498641 ANP32EQ9BTT0 268 aa8.24□□□□□ -1.09
GPATCH4-209ENST00000498641 RNF26Q9BY78 433 aaPredicted RBP8.24□□□□□ -1.09
GPATCH4-209ENST00000498641 DEFB129Q9H1M3 183 aa8.24□□□□□ -1.09
GPATCH4-209ENST00000498641 ISY1Q9ULR0 285 aaKnown RBP8.24□□□□□ -1.09
GPATCH4-209ENST00000498641 SCAF8Q9UPN6 1271 aaKnown RBP8.24□□□□□ -1.09
GPATCH4-209ENST00000498641 ASTN2O75129 1339 aaPredicted RBP8.24□□□□□ -1.09
GPATCH4-209ENST00000498641 ZNF646O15015 1829 aaPredicted RBP8.24□□□□□ -1.09
GPATCH4-209ENST00000498641 ARFGEF1Q9Y6D6 1849 aa8.24□□□□□ -1.09
GPATCH4-209ENST00000498641 DDX60LQ5H9U9 1706 aaKnown RBP8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 hCG_1642624A0A1W2PR95 340 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 USP17L5A8MUK1 530 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 KLRF2D3W0D1 207 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 PRPF40AO75400 957 aaKnown RBP8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 GOLGA8HP0CJ92 632 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 EEF2P13639 858 aaKnown RBP8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 GUCY1A2P33402 732 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 NOVP48745 357 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 ICA1Q05084 483 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 RESTQ13127 1097 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 SAFBQ15424 915 aaKnown RBP eCLIP8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 CSPP1Q1MSJ5 1256 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 KRT40Q6A162 431 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 STAG2Q8N3U4 1231 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 SRBD1Q8N5C6 995 aaKnown RBP8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 RGS22Q8NE09 1264 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 TRPM4Q8TD43 1214 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 HOOK2Q96ED9 719 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 AIFM3Q96NN9 605 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 GJB4Q9NTQ9 266 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 NYAP2Q9P242 653 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 RBM27Q9P2N5 1060 aaKnown RBP8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 MAD2L2Q9UI95 211 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 CNPY2Q9Y2B0 182 aa8.23□□□□□ -1.09
GPATCH4-209ENST00000498641 PSME4Q14997 1843 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 PALM3A6NDB9 673 aaPredicted RBP8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 UBE2Q2LH0YL09 131 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 KRT85P78386 507 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 DNM1Q05193 864 aaKnown RBP8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 FUT2Q10981 343 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 RRP1BQ14684 758 aaKnown RBP8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 CCDC96Q2M329 555 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 SHROOM1Q2M3G4 852 aaPredicted RBP8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 SKOR2Q2VWA4 1001 aaPredicted RBP8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 ASPRV1Q53RT3 343 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 DCAF15Q66K64 600 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 FAM173BQ6P4H8 233 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 USP17L2Q6R6M4 530 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 CDAN1Q8IWY9 1227 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 MKL1Q969V6 931 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 DCPSQ96C86 337 aaKnown RBP8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 ZNF396Q96N95 335 aaPredicted RBP8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 ARHGEF10LQ9HCE6 1279 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 VAT1LQ9HCJ6 419 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 GPCPD1Q9NPB8 672 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 ADARB2Q9NS39 739 aaKnown RBP8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 GGA3Q9NZ52 723 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 PGAP2Q9UHJ9 254 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 MYH1P12882 1939 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 FRMPD2Q68DX3 1309 aaPredicted RBP8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 CNTNAP5Q8WYK1 1306 aa8.22□□□□□ -1.09
GPATCH4-209ENST00000498641 FIBPO43427 364 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 TRAK2O60296 914 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 PDHBP11177 359 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 SCG2P13521 617 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 CAP2P40123 477 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 HIRAP54198 1017 aaPredicted RBP8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 JAG1P78504 1218 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 PKN1Q16512 942 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 NBPF12Q5TAG4 269 aaPredicted RBP8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 SLFN13Q68D06 897 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 RASGRP2Q7LDG7 609 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 BRAPQ7Z569 592 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 USP48Q86UV5 1035 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 DCAF4Q8WV16 495 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 RRP36Q96EU6 259 aaKnown RBP8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 TEPSINQ96N21 525 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 UBA5Q9GZZ9 404 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 GDPD2Q9HCC8 539 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 BRMS1Q9HCU9 246 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 LMBRD1Q9NUN5 540 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 VPS54Q9P1Q0 977 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 TFIP11Q9UBB9 837 aaKnown RBP8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 SEC63Q9UGP8 760 aaKnown RBP8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 CFAP45Q9UL16 551 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 ZBTB21Q9ULJ3 1066 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 KCNJ14Q9UNX9 436 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 DDX49Q9Y6V7 483 aaKnown RBP8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 FOCADQ5VW36 1801 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 CDK5RAP2Q96SN8 1893 aa8.21□□□□□ -1.1
GPATCH4-209ENST00000498641 ECM29Q5VYK3 1845 aa8.2□□□□□ -1.1
GPATCH4-209ENST00000498641 MMP1P03956 469 aa8.2□□□□□ -1.1
GPATCH4-209ENST00000498641 ASNSP08243 561 aa8.2□□□□□ -1.1
GPATCH4-209ENST00000498641 SMARCA1P28370 1054 aa8.2□□□□□ -1.1
GPATCH4-209ENST00000498641 SLC1A4P43007 532 aa8.2□□□□□ -1.1
GPATCH4-209ENST00000498641 NLRP5P59047 1200 aa8.2□□□□□ -1.1
GPATCH4-209ENST00000498641 KIF23Q02241 960 aaPredicted RBP8.2□□□□□ -1.1
GPATCH4-209ENST00000498641 MAP3K10Q02779 954 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms