RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 SIPA1L1O43166 1804 aa20.17■□□□□ 0.82
SUPT20H-223ENST00000497318 TRIM43BA6NCK2 446 aa20.16■□□□□ 0.82
SUPT20H-223ENST00000497318 SURF6O75683 361 aaKnown RBP20.16■□□□□ 0.82
SUPT20H-223ENST00000497318 POLR3DP05423 398 aaPredicted RBP20.16■□□□□ 0.82
SUPT20H-223ENST00000497318 ERCC3P19447 782 aa20.16■□□□□ 0.82
SUPT20H-223ENST00000497318 TLE2Q04725 743 aa20.16■□□□□ 0.82
SUPT20H-223ENST00000497318 LRRC41Q15345 812 aa20.16■□□□□ 0.82
SUPT20H-223ENST00000497318 ANO1Q5XXA6 986 aa20.16■□□□□ 0.82
SUPT20H-223ENST00000497318 MAGEB6Q8N7X4 407 aa20.16■□□□□ 0.82
SUPT20H-223ENST00000497318 TRIM43Q96BQ3 446 aaPredicted RBP20.16■□□□□ 0.82
SUPT20H-223ENST00000497318 PLS1Q14651 629 aa20.15■□□□□ 0.82
SUPT20H-223ENST00000497318 NRBP1Q9UHY1 535 aa20.15■□□□□ 0.82
SUPT20H-223ENST00000497318 MAST2Q6P0Q8 1798 aa20.15■□□□□ 0.82
SUPT20H-223ENST00000497318 MPHOSPH10O00566 681 aaKnown RBP20.14■□□□□ 0.81
SUPT20H-223ENST00000497318 COBLO75128 1261 aa20.14■□□□□ 0.81
SUPT20H-223ENST00000497318 CLTBP09497 229 aa20.14■□□□□ 0.81
SUPT20H-223ENST00000497318 RARBP10826 455 aa20.14■□□□□ 0.81
SUPT20H-223ENST00000497318 FCER1AP12319 257 aa20.14■□□□□ 0.81
SUPT20H-223ENST00000497318 SHMT1P34896 483 aa20.14■□□□□ 0.81
SUPT20H-223ENST00000497318 POLA2Q14181 598 aa20.14■□□□□ 0.81
SUPT20H-223ENST00000497318 SEPT2Q15019 361 aa20.14■□□□□ 0.81
SUPT20H-223ENST00000497318 SH3RF1Q7Z6J0 888 aa20.14■□□□□ 0.81
SUPT20H-223ENST00000497318 RNF180Q86T96 592 aa20.14■□□□□ 0.81
SUPT20H-223ENST00000497318 NCAPG2Q86XI2 1143 aa20.14■□□□□ 0.81
SUPT20H-223ENST00000497318 PHF24Q9UPV7 400 aa20.14■□□□□ 0.81
SUPT20H-223ENST00000497318 TRIM27P14373 513 aa20.13■□□□□ 0.81
SUPT20H-223ENST00000497318 RAG1P15918 1043 aa20.13■□□□□ 0.81
SUPT20H-223ENST00000497318 PRAMEF19Q5SWL8 479 aa20.13■□□□□ 0.81
SUPT20H-223ENST00000497318 SSH3Q8TE77 659 aa20.13■□□□□ 0.81
SUPT20H-223ENST00000497318 FRAT1Q92837 279 aaPredicted RBP20.13■□□□□ 0.81
SUPT20H-223ENST00000497318 XPNPEP3Q9NQH7 507 aa20.13■□□□□ 0.81
SUPT20H-223ENST00000497318 GUCY1A2P33402 732 aa20.12■□□□□ 0.81
SUPT20H-223ENST00000497318 PLCD1P51178 756 aa20.12■□□□□ 0.81
SUPT20H-223ENST00000497318 ATP8B2P98198 1209 aa20.12■□□□□ 0.81
SUPT20H-223ENST00000497318 TJAP1Q5JTD0 557 aa20.12■□□□□ 0.81
SUPT20H-223ENST00000497318 MAML3Q96JK9 1138 aa20.12■□□□□ 0.81
SUPT20H-223ENST00000497318 DBNLQ9UJU6 430 aaKnown RBP20.12■□□□□ 0.81
SUPT20H-223ENST00000497318 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.11■□□□□ 0.81
SUPT20H-223ENST00000497318 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.11■□□□□ 0.81
SUPT20H-223ENST00000497318 KIAA0355O15063 1070 aa20.11■□□□□ 0.81
SUPT20H-223ENST00000497318 FLOT1O75955 427 aa20.11■□□□□ 0.81
SUPT20H-223ENST00000497318 SLC25A27O95847 323 aa20.11■□□□□ 0.81
SUPT20H-223ENST00000497318 DSG3P32926 999 aa20.11■□□□□ 0.81
SUPT20H-223ENST00000497318 FPGSQ05932 587 aa20.11■□□□□ 0.81
SUPT20H-223ENST00000497318 FAM47AQ5JRC9 791 aa20.11■□□□□ 0.81
SUPT20H-223ENST00000497318 SH2D4AQ9H788 454 aa20.11■□□□□ 0.81
SUPT20H-223ENST00000497318 TMEM39AQ9NV64 488 aa20.11■□□□□ 0.81
SUPT20H-223ENST00000497318 PRUNE2Q8WUY3 3088 aa20.11■□□□□ 0.81
SUPT20H-223ENST00000497318 SPTBN5Q9NRC6 3674 aaKnown RBP20.11■□□□□ 0.81
SUPT20H-223ENST00000497318 TMEM179Q6ZVK1 233 aa20.1■□□□□ 0.81
SUPT20H-223ENST00000497318 CLUAP1Q96AJ1 413 aa20.1■□□□□ 0.81
SUPT20H-223ENST00000497318 CRNKL1Q9BZJ0 848 aaKnown RBP20.1■□□□□ 0.81
SUPT20H-223ENST00000497318 CCDC8Q9H0W5 538 aaPredicted RBP20.1■□□□□ 0.81
SUPT20H-223ENST00000497318 ARHGEF10LQ9HCE6 1279 aa20.1■□□□□ 0.81
SUPT20H-223ENST00000497318 MCM9Q9NXL9 1143 aa20.1■□□□□ 0.81
SUPT20H-223ENST00000497318 FRMPD3Q5JV73 1810 aa20.1■□□□□ 0.81
SUPT20H-223ENST00000497318 MAGEB6P1A0A0J9YX57 407 aa20.09■□□□□ 0.81
SUPT20H-223ENST00000497318 A0A1W2PRG0 241 aa20.09■□□□□ 0.81
SUPT20H-223ENST00000497318 DCDC2CA8MYV0 355 aa20.09■□□□□ 0.81
SUPT20H-223ENST00000497318 PQBP1O60828 265 aaKnown RBP20.09■□□□□ 0.81
SUPT20H-223ENST00000497318 BCAR3O75815 825 aa20.09■□□□□ 0.81
SUPT20H-223ENST00000497318 GABPAQ06546 454 aa20.09■□□□□ 0.81
SUPT20H-223ENST00000497318 CCDC174Q6PII3 467 aa20.09■□□□□ 0.81
SUPT20H-223ENST00000497318 NOP58Q9Y2X3 529 aaKnown RBP20.09■□□□□ 0.81
SUPT20H-223ENST00000497318 TNFRSF10AO00220 468 aa20.08■□□□□ 0.81
SUPT20H-223ENST00000497318 KCTD2Q14681 263 aa20.08■□□□□ 0.81
SUPT20H-223ENST00000497318 GRIN2CQ14957 1233 aa20.08■□□□□ 0.81
SUPT20H-223ENST00000497318 TTF1Q15361 905 aaPredicted RBP20.08■□□□□ 0.81
SUPT20H-223ENST00000497318 TOX2Q96NM4 488 aa20.08■□□□□ 0.81
SUPT20H-223ENST00000497318 MMP19Q99542 508 aa20.08■□□□□ 0.81
SUPT20H-223ENST00000497318 SWAP70Q9UH65 585 aa20.08■□□□□ 0.81
SUPT20H-223ENST00000497318 EYSQ5T1H1 3165 aa20.08■□□□□ 0.8
SUPT20H-223ENST00000497318 LTBP2Q14767 1821 aa20.08■□□□□ 0.8
SUPT20H-223ENST00000497318 FOCADQ5VW36 1801 aa20.08■□□□□ 0.8
SUPT20H-223ENST00000497318 PGK1P00558 417 aa20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 DNAJB2P25686 324 aa20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 ITGB8P26012 769 aa20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 EPHB4P54760 987 aa20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 SAMD1Q6SPF0 538 aaPredicted RBP20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 NUP133Q8WUM0 1156 aa20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 EAF2Q96CJ1 260 aaPredicted RBP20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 ATG4CQ96DT6 458 aa20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 RIOK1Q9BRS2 568 aaKnown RBP20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 TINF2Q9BSI4 451 aa20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 TSEN34Q9BSV6 310 aaKnown RBP20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 TLR7Q9NYK1 1049 aaKnown RBP20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 CNPY2Q9Y2B0 182 aa20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 DIS3Q9Y2L1 958 aaKnown RBP20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 RLFQ13129 1914 aa20.07■□□□□ 0.8
SUPT20H-223ENST00000497318 A0A1W2PQ45 241 aaPredicted RBP20.06■□□□□ 0.8
SUPT20H-223ENST00000497318 A0A1W2PQY0 241 aa20.06■□□□□ 0.8
SUPT20H-223ENST00000497318 AKR1A1P14550 325 aa20.06■□□□□ 0.8
SUPT20H-223ENST00000497318 COPB2P35606 906 aa20.06■□□□□ 0.8
SUPT20H-223ENST00000497318 ANKRD33Q7Z3H0 272 aa20.06■□□□□ 0.8
SUPT20H-223ENST00000497318 TIFAQ96CG3 184 aa20.06■□□□□ 0.8
SUPT20H-223ENST00000497318 ZNF576Q9H609 170 aa20.06■□□□□ 0.8
SUPT20H-223ENST00000497318 ANTXR1Q9H6X2 564 aa20.06■□□□□ 0.8
SUPT20H-223ENST00000497318 TMX2Q9Y320 296 aa20.06■□□□□ 0.8
SUPT20H-223ENST00000497318 ZNF236Q9UL36 1845 aa20.06■□□□□ 0.8
SUPT20H-223ENST00000497318 CDK5RAP2Q96SN8 1893 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms