RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CRNKL1Q9BZJ0 848 aaKnown RBP17.29■□□□□ 0.36
VARS-228ENST00000495010 MCM9Q9NXL9 1143 aa17.29■□□□□ 0.36
VARS-228ENST00000495010 COL6A3P12111 3177 aa17.28■□□□□ 0.36
VARS-228ENST00000495010 CCER2I3L3R5 266 aa17.28■□□□□ 0.36
VARS-228ENST00000495010 ERCC3P19447 782 aa17.28■□□□□ 0.36
VARS-228ENST00000495010 GUCY1A2P33402 732 aa17.28■□□□□ 0.36
VARS-228ENST00000495010 TTF1Q15361 905 aaPredicted RBP17.28■□□□□ 0.36
VARS-228ENST00000495010 ANO1Q5XXA6 986 aa17.28■□□□□ 0.36
VARS-228ENST00000495010 SHCBP1Q8NEM2 672 aa17.28■□□□□ 0.36
VARS-228ENST00000495010 COL25A1Q9BXS0 654 aaPredicted RBP17.28■□□□□ 0.36
VARS-228ENST00000495010 SPATC1LQ9H0A9 340 aa17.28■□□□□ 0.36
VARS-228ENST00000495010 SEPT4O43236 478 aa17.27■□□□□ 0.36
VARS-228ENST00000495010 NCAPG2Q86XI2 1143 aa17.27■□□□□ 0.36
VARS-228ENST00000495010 MB21D1Q8N884 522 aa17.27■□□□□ 0.36
VARS-228ENST00000495010 RIOK1Q9BRS2 568 aaKnown RBP17.27■□□□□ 0.36
VARS-228ENST00000495010 MROH8Q9H579 483 aa17.27■□□□□ 0.36
VARS-228ENST00000495010 SHHQ15465 462 aa17.26■□□□□ 0.35
VARS-228ENST00000495010 SLC9C2Q5TAH2 1124 aa17.26■□□□□ 0.35
VARS-228ENST00000495010 SAMD1Q6SPF0 538 aaPredicted RBP17.26■□□□□ 0.35
VARS-228ENST00000495010 ARHGEF10LQ9HCE6 1279 aa17.26■□□□□ 0.35
VARS-228ENST00000495010 A0A1W2PRG0 241 aa17.25■□□□□ 0.35
VARS-228ENST00000495010 FLOT1O75955 427 aa17.25■□□□□ 0.35
VARS-228ENST00000495010 DSG3P32926 999 aa17.25■□□□□ 0.35
VARS-228ENST00000495010 ADCYAP1R1P41586 468 aa17.25■□□□□ 0.35
VARS-228ENST00000495010 GABPAQ06546 454 aa17.25■□□□□ 0.35
VARS-228ENST00000495010 TRIM60Q495X7 471 aa17.25■□□□□ 0.35
VARS-228ENST00000495010 TMEM179Q6ZVK1 233 aa17.25■□□□□ 0.35
VARS-228ENST00000495010 BADQ92934 168 aa17.25■□□□□ 0.35
VARS-228ENST00000495010 SH2D4AQ9H788 454 aa17.25■□□□□ 0.35
VARS-228ENST00000495010 SWAP70Q9UH65 585 aa17.25■□□□□ 0.35
VARS-228ENST00000495010 EXOC6BQ9Y2D4 811 aa17.25■□□□□ 0.35
VARS-228ENST00000495010 COBLO75128 1261 aa17.24■□□□□ 0.35
VARS-228ENST00000495010 IGHA2P01877 340 aa17.24■□□□□ 0.35
VARS-228ENST00000495010 FCER1AP12319 257 aa17.24■□□□□ 0.35
VARS-228ENST00000495010 HSP90AB4PQ58FF6 505 aa17.24■□□□□ 0.35
VARS-228ENST00000495010 PRAMEF19Q5SWL8 479 aa17.24■□□□□ 0.35
VARS-228ENST00000495010 ABRAQ8N0Z2 381 aa17.24■□□□□ 0.35
VARS-228ENST00000495010 FERMT2Q96AC1 680 aa17.24■□□□□ 0.35
VARS-228ENST00000495010 CDX2Q99626 313 aaPredicted RBP17.24■□□□□ 0.35
VARS-228ENST00000495010 NAV1Q8NEY1 1877 aa17.24■□□□□ 0.35
VARS-228ENST00000495010 ZNF236Q9UL36 1845 aa17.24■□□□□ 0.35
VARS-228ENST00000495010 PDE6AP16499 860 aa17.23■□□□□ 0.35
VARS-228ENST00000495010 LRRC41Q15345 812 aa17.23■□□□□ 0.35
VARS-228ENST00000495010 C9orf50Q5SZB4 431 aa17.23■□□□□ 0.35
VARS-228ENST00000495010 CEP85Q6P2H3 762 aa17.23■□□□□ 0.35
VARS-228ENST00000495010 AMOTL1Q8IY63 956 aa17.23■□□□□ 0.35
VARS-228ENST00000495010 SPICE1Q8N0Z3 855 aa17.23■□□□□ 0.35
VARS-228ENST00000495010 SDR42E1Q8WUS8 393 aa17.23■□□□□ 0.35
VARS-228ENST00000495010 SEMA6BQ9H3T3 888 aa17.23■□□□□ 0.35
VARS-228ENST00000495010 IL1RAPL2Q9NP60 686 aa17.23■□□□□ 0.35
VARS-228ENST00000495010 ZNF532Q9HCE3 1301 aa17.22■□□□□ 0.35
VARS-228ENST00000495010 LTBP2Q14767 1821 aa17.22■□□□□ 0.35
VARS-228ENST00000495010 SLC25A27O95847 323 aa17.22■□□□□ 0.35
VARS-228ENST00000495010 RARBP10826 455 aa17.22■□□□□ 0.35
VARS-228ENST00000495010 ICA1Q05084 483 aa17.22■□□□□ 0.35
VARS-228ENST00000495010 MAFAQ8NHW3 353 aaPredicted RBP17.22■□□□□ 0.35
VARS-228ENST00000495010 ATG4CQ96DT6 458 aa17.22■□□□□ 0.35
VARS-228ENST00000495010 MAML3Q96JK9 1138 aa17.22■□□□□ 0.35
VARS-228ENST00000495010 DNAJC2Q99543 621 aaKnown RBP17.22■□□□□ 0.35
VARS-228ENST00000495010 BCL11AQ9H165 835 aa17.22■□□□□ 0.35
VARS-228ENST00000495010 DCP1AQ9NPI6 582 aaPredicted RBP17.22■□□□□ 0.35
VARS-228ENST00000495010 PDLIM7Q9NR12 457 aa17.22■□□□□ 0.35
VARS-228ENST00000495010 CUL9Q8IWT3 2517 aa17.22■□□□□ 0.35
VARS-228ENST00000495010 RLFQ13129 1914 aa17.21■□□□□ 0.35
VARS-228ENST00000495010 GOLIM4O00461 696 aa17.21■□□□□ 0.35
VARS-228ENST00000495010 SMAD3P84022 425 aaKnown RBP17.21■□□□□ 0.35
VARS-228ENST00000495010 EVX2Q03828 476 aa17.21■□□□□ 0.35
VARS-228ENST00000495010 SNX17Q15036 470 aa17.21■□□□□ 0.35
VARS-228ENST00000495010 FAM47AQ5JRC9 791 aa17.21■□□□□ 0.35
VARS-228ENST00000495010 RNF180Q86T96 592 aa17.21■□□□□ 0.35
VARS-228ENST00000495010 CLASRPQ8N2M8 674 aaKnown RBP17.21■□□□□ 0.35
VARS-228ENST00000495010 LCORLQ8N3X6 602 aa17.21■□□□□ 0.35
VARS-228ENST00000495010 SLC44A5Q8NCS7 719 aa17.21■□□□□ 0.35
VARS-228ENST00000495010 MMP19Q99542 508 aa17.21■□□□□ 0.35
VARS-228ENST00000495010 VCPKMTQ9H867 229 aa17.21■□□□□ 0.35
VARS-228ENST00000495010 XPNPEP3Q9NQH7 507 aa17.21■□□□□ 0.35
VARS-228ENST00000495010 TMX2Q9Y320 296 aa17.21■□□□□ 0.35
VARS-228ENST00000495010 TACC3Q9Y6A5 838 aa17.21■□□□□ 0.35
VARS-228ENST00000495010 WDR46O15213 610 aaKnown RBP17.2■□□□□ 0.34
VARS-228ENST00000495010 IFIT2P09913 472 aaKnown RBP17.2■□□□□ 0.34
VARS-228ENST00000495010 CYP2D6P10635 497 aa17.2■□□□□ 0.34
VARS-228ENST00000495010 TLE2Q04725 743 aa17.2■□□□□ 0.34
VARS-228ENST00000495010 KCTD2Q14681 263 aa17.2■□□□□ 0.34
VARS-228ENST00000495010 KIAA1755Q5JYT7 1200 aa17.2■□□□□ 0.34
VARS-228ENST00000495010 C1orf53Q5VUE5 145 aa17.2■□□□□ 0.34
VARS-228ENST00000495010 SH3RF1Q7Z6J0 888 aa17.2■□□□□ 0.34
VARS-228ENST00000495010 RHPN1Q8TCX5 695 aa17.2■□□□□ 0.34
VARS-228ENST00000495010 DYNLL2Q96FJ2 89 aa17.2■□□□□ 0.34
VARS-228ENST00000495010 DDRGK1Q96HY6 314 aa17.2■□□□□ 0.34
VARS-228ENST00000495010 NRBP1Q9UHY1 535 aa17.2■□□□□ 0.34
VARS-228ENST00000495010 TRIM43BA6NCK2 446 aa17.19■□□□□ 0.34
VARS-228ENST00000495010 APBB1O00213 710 aa17.19■□□□□ 0.34
VARS-228ENST00000495010 RAD21O60216 631 aa17.19■□□□□ 0.34
VARS-228ENST00000495010 CLTBP09497 229 aa17.19■□□□□ 0.34
VARS-228ENST00000495010 RLBP1P12271 317 aa17.19■□□□□ 0.34
VARS-228ENST00000495010 AKR1B1P15121 316 aa17.19■□□□□ 0.34
VARS-228ENST00000495010 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.19■□□□□ 0.34
VARS-228ENST00000495010 MYLIPQ8WY64 445 aa17.19■□□□□ 0.34
VARS-228ENST00000495010 TRIM43Q96BQ3 446 aaPredicted RBP17.19■□□□□ 0.34
VARS-228ENST00000495010 RNPC3Q96LT9 517 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms