RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 HMX1Q9NP08 348 aaPredicted RBP11.52□□□□□ -0.57
MSH5-218ENST00000494646 RABGAP1Q9Y3P9 1069 aa11.52□□□□□ -0.57
MSH5-218ENST00000494646 SPDYE16A6NNV3 312 aaPredicted RBP11.51□□□□□ -0.57
MSH5-218ENST00000494646 H0YGN5 161 aa11.51□□□□□ -0.57
MSH5-218ENST00000494646 M0R2C6 588 aa11.51□□□□□ -0.57
MSH5-218ENST00000494646 RAD21O60216 631 aa11.51□□□□□ -0.57
MSH5-218ENST00000494646 HMGCRP04035 888 aa11.51□□□□□ -0.57
MSH5-218ENST00000494646 APPP05067 770 aa11.51□□□□□ -0.57
MSH5-218ENST00000494646 EEF2P13639 858 aaKnown RBP11.51□□□□□ -0.57
MSH5-218ENST00000494646 COG2Q14746 738 aa11.51□□□□□ -0.57
MSH5-218ENST00000494646 CCL14Q16627 93 aa11.51□□□□□ -0.57
MSH5-218ENST00000494646 C16orf86Q6ZW13 317 aa11.51□□□□□ -0.57
MSH5-218ENST00000494646 PI4K2BQ8TCG2 481 aa11.51□□□□□ -0.57
MSH5-218ENST00000494646 APPBP2Q92624 585 aa11.51□□□□□ -0.57
MSH5-218ENST00000494646 MKNK2Q9HBH9 465 aa11.51□□□□□ -0.57
MSH5-218ENST00000494646 ARHGEF10LQ9HCE6 1279 aa11.51□□□□□ -0.57
MSH5-218ENST00000494646 PAK6Q9NQU5 681 aaPredicted RBP11.51□□□□□ -0.57
MSH5-218ENST00000494646 HOXC10Q9NYD6 342 aa11.51□□□□□ -0.57
MSH5-218ENST00000494646 RLFQ13129 1914 aa11.5□□□□□ -0.57
MSH5-218ENST00000494646 PATL2C9JE40 543 aaKnown RBP11.5□□□□□ -0.57
MSH5-218ENST00000494646 ERC2O15083 957 aa11.5□□□□□ -0.57
MSH5-218ENST00000494646 GPAA1O43292 621 aa11.5□□□□□ -0.57
MSH5-218ENST00000494646 FARP2O94887 1054 aaPredicted RBP11.5□□□□□ -0.57
MSH5-218ENST00000494646 RGS2P41220 211 aa11.5□□□□□ -0.57
MSH5-218ENST00000494646 CCNA1P78396 465 aa11.5□□□□□ -0.57
MSH5-218ENST00000494646 ICA1Q05084 483 aa11.5□□□□□ -0.57
MSH5-218ENST00000494646 PLS1Q14651 629 aa11.5□□□□□ -0.57
MSH5-218ENST00000494646 MORN1Q5T089 497 aa11.5□□□□□ -0.57
MSH5-218ENST00000494646 USP6NLQ92738 828 aa11.5□□□□□ -0.57
MSH5-218ENST00000494646 PAWRQ96IZ0 340 aaKnown RBP11.5□□□□□ -0.57
MSH5-218ENST00000494646 CCDC17Q96LX7 622 aa11.5□□□□□ -0.57
MSH5-218ENST00000494646 ZBTB47Q9UFB7 747 aaPredicted RBP11.5□□□□□ -0.57
MSH5-218ENST00000494646 TMX2Q9Y320 296 aa11.5□□□□□ -0.57
MSH5-218ENST00000494646 TTC41PQ6P2S7 1318 aa11.5□□□□□ -0.57
MSH5-218ENST00000494646 RPTORQ8N122 1335 aa11.5□□□□□ -0.57
MSH5-218ENST00000494646 COL11A1P12107 1806 aaPredicted RBP11.49□□□□□ -0.57
MSH5-218ENST00000494646 GLRX3O76003 335 aaKnown RBP11.49□□□□□ -0.57
MSH5-218ENST00000494646 SLC34A2O95436 690 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 ZFYP08048 801 aaPredicted RBP11.49□□□□□ -0.57
MSH5-218ENST00000494646 PRKAR2AP13861 404 aaKnown RBP11.49□□□□□ -0.57
MSH5-218ENST00000494646 PTPREP23469 700 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 DSG3P32926 999 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 TDO2P48775 406 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 CACNB2Q08289 660 aaPredicted RBP11.49□□□□□ -0.57
MSH5-218ENST00000494646 MAP2K5Q13163 448 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 SBK1Q52WX2 424 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 UBE2Q1Q7Z7E8 422 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 IFNL3Q8IZI9 196 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 SOCS4Q8WXH5 440 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 FSD1Q9BTV5 496 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 HTATIP2Q9BUP3 242 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.49□□□□□ -0.57
MSH5-218ENST00000494646 CRISPLD2Q9H0B8 497 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 VCPKMTQ9H867 229 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 ARPP21Q9UBL0 812 aaPredicted RBP11.49□□□□□ -0.57
MSH5-218ENST00000494646 COLQQ9Y215 455 aaPredicted RBP11.49□□□□□ -0.57
MSH5-218ENST00000494646 DNAH12Q6ZR08 3092 aa11.49□□□□□ -0.57
MSH5-218ENST00000494646 MYH4Q9Y623 1939 aa11.48□□□□□ -0.57
MSH5-218ENST00000494646 PRDM1O75626 825 aa11.48□□□□□ -0.57
MSH5-218ENST00000494646 FLOT1O75955 427 aa11.48□□□□□ -0.57
MSH5-218ENST00000494646 XRCC5P13010 732 aaKnown RBP11.48□□□□□ -0.57
MSH5-218ENST00000494646 ZKSCAN1P17029 563 aaPredicted RBP11.48□□□□□ -0.57
MSH5-218ENST00000494646 MX1P20591 662 aa11.48□□□□□ -0.57
MSH5-218ENST00000494646 CCND3P30281 292 aaPredicted RBP11.48□□□□□ -0.57
MSH5-218ENST00000494646 HABP4Q5JVS0 413 aaKnown RBP11.48□□□□□ -0.57
MSH5-218ENST00000494646 B4GALNT3Q6L9W6 998 aa11.48□□□□□ -0.57
MSH5-218ENST00000494646 LBX2Q6XYB7 198 aa11.48□□□□□ -0.57
MSH5-218ENST00000494646 ZNF444Q8N0Y2 327 aaPredicted RBP11.48□□□□□ -0.57
MSH5-218ENST00000494646 NPLOC4Q8TAT6 608 aa11.48□□□□□ -0.57
MSH5-218ENST00000494646 DIS3LQ8TF46 1054 aaKnown RBP11.48□□□□□ -0.57
MSH5-218ENST00000494646 GCC1Q96CN9 775 aa11.48□□□□□ -0.57
MSH5-218ENST00000494646 ATG4CQ96DT6 458 aa11.48□□□□□ -0.57
MSH5-218ENST00000494646 MOV10L1Q9BXT6 1211 aaKnown RBP11.48□□□□□ -0.57
MSH5-218ENST00000494646 KANSL2Q9H9L4 492 aa11.48□□□□□ -0.57
MSH5-218ENST00000494646 EPB41L4AQ9HCS5 686 aaPredicted RBP11.48□□□□□ -0.57
MSH5-218ENST00000494646 FLRT1Q9NZU1 646 aa11.48□□□□□ -0.57
MSH5-218ENST00000494646 ALPK3Q96L96 1907 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 PARP14Q460N5 1801 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 SLC15A5A6NIM6 579 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 GNAT2P19087 354 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 ERCC3P19447 782 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 RASA1P20936 1047 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 LRRFIP1Q32MZ4 808 aaKnown RBP11.47□□□□□ -0.57
MSH5-218ENST00000494646 GIMAP6Q6P9H5 292 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 CCDC129Q6ZRS4 1044 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 NECAB2Q7Z6G3 386 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 DPP9Q86TI2 863 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 NCAPG2Q86XI2 1143 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 TRMT44Q8IYL2 757 aaKnown RBP11.47□□□□□ -0.57
MSH5-218ENST00000494646 LPAR1Q92633 364 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 SPATC1LQ9H0A9 340 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 SH2D4AQ9H788 454 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 FBXO28Q9NVF7 368 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 CLIP2Q9UDT6 1046 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 IVNS1ABPQ9Y6Y0 642 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 SMCHD1A6NHR9 2005 aa11.47□□□□□ -0.57
MSH5-218ENST00000494646 WDR46O15213 610 aaKnown RBP11.46□□□□□ -0.57
MSH5-218ENST00000494646 EVI5O60447 810 aa11.46□□□□□ -0.57
MSH5-218ENST00000494646 CNGA1P29973 690 aa11.46□□□□□ -0.57
MSH5-218ENST00000494646 GRB14Q14449 540 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms