RNA–Protein interactions for RNA: ENST00000494504.5

KATNA1-208, Transcript of katanin catalytic subunit A1, human

TSL 5

Gene KATNA1, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KATNA1-208	ENST00000494504	C1QTNF2	Q9BXJ5	285 aa		9.1	□□□□□ -0.95
KATNA1-208	ENST00000494504	PHAX	Q9H814	394 aa	Known RBP	9.1	□□□□□ -0.95
KATNA1-208	ENST00000494504	PRDM5	Q9NQX1	630 aa	Predicted RBP	9.1	□□□□□ -0.95
KATNA1-208	ENST00000494504	DNMT3L	Q9UJW3	386 aa		9.1	□□□□□ -0.95
KATNA1-208	ENST00000494504	MAP4K5	Q9Y4K4	846 aa		9.1	□□□□□ -0.95
KATNA1-208	ENST00000494504	MGAM	O43451	1857 aa		9.1	□□□□□ -0.95
KATNA1-208	ENST00000494504	SPEF2	Q9C093	1822 aa		9.1	□□□□□ -0.95
KATNA1-208	ENST00000494504	DLG5	Q8TDM6	1919 aa		9.09	□□□□□ -0.95
KATNA1-208	ENST00000494504	DNAH12	Q6ZR08	3092 aa		9.09	□□□□□ -0.95
KATNA1-208	ENST00000494504	FAM86C2P	A6NEL3	165 aa		9.09	□□□□□ -0.95
KATNA1-208	ENST00000494504	PLIN1	O60240	522 aa		9.09	□□□□□ -0.95
KATNA1-208	ENST00000494504	ITGA6	P23229	1130 aa		9.09	□□□□□ -0.95
KATNA1-208	ENST00000494504	MRE11	P49959	708 aa		9.09	□□□□□ -0.95
KATNA1-208	ENST00000494504	RIPK4	P57078	832 aa		9.09	□□□□□ -0.95
KATNA1-208	ENST00000494504	FKBP1A	P62942	108 aa	Known RBP	9.09	□□□□□ -0.95
KATNA1-208	ENST00000494504	TRIB2	Q92519	343 aa		9.09	□□□□□ -0.95
KATNA1-208	ENST00000494504	BAD	Q92934	168 aa		9.09	□□□□□ -0.95
KATNA1-208	ENST00000494504	PLEKHF1	Q96S99	279 aa		9.09	□□□□□ -0.95
KATNA1-208	ENST00000494504	ATP11B	Q9Y2G3	1177 aa		9.09	□□□□□ -0.95
KATNA1-208	ENST00000494504	ZHX2	Q9Y6X8	837 aa		9.09	□□□□□ -0.95
KATNA1-208	ENST00000494504	MAPK8IP3	Q9UPT6	1336 aa		9.08	□□□□□ -0.96
KATNA1-208	ENST00000494504	MAGEB6P1	A0A0J9YX57	407 aa		9.08	□□□□□ -0.96
KATNA1-208	ENST00000494504	CXCL11	O14625	94 aa		9.08	□□□□□ -0.96
KATNA1-208	ENST00000494504	KCNMA1	Q12791	1236 aa		9.08	□□□□□ -0.96
KATNA1-208	ENST00000494504	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	9.08	□□□□□ -0.96
KATNA1-208	ENST00000494504	TMEM31	Q5JXX7	168 aa		9.08	□□□□□ -0.96
KATNA1-208	ENST00000494504	SH3RF1	Q7Z6J0	888 aa		9.08	□□□□□ -0.96
KATNA1-208	ENST00000494504	TRMT44	Q8IYL2	757 aa	Known RBP	9.08	□□□□□ -0.96
KATNA1-208	ENST00000494504	HOOK2	Q96ED9	719 aa		9.08	□□□□□ -0.96
KATNA1-208	ENST00000494504	TMOD2	Q9NZR1	351 aa		9.08	□□□□□ -0.96
KATNA1-208	ENST00000494504	GJD2	Q9UKL4	321 aa		9.08	□□□□□ -0.96
KATNA1-208	ENST00000494504	DOCK3	Q8IZD9	2030 aa		9.08	□□□□□ -0.96
KATNA1-208	ENST00000494504	IGFBP4	P22692	258 aa		9.07	□□□□□ -0.96
KATNA1-208	ENST00000494504	CCND3	P30281	292 aa	Predicted RBP	9.07	□□□□□ -0.96
KATNA1-208	ENST00000494504	RTP1	P59025	263 aa		9.07	□□□□□ -0.96
KATNA1-208	ENST00000494504	FASTKD5	Q7L8L6	764 aa	Known RBP	9.07	□□□□□ -0.96
KATNA1-208	ENST00000494504	CCDC116	Q8IYX3	515 aa		9.07	□□□□□ -0.96
KATNA1-208	ENST00000494504	RNPC3	Q96LT9	517 aa	Known RBP	9.07	□□□□□ -0.96
KATNA1-208	ENST00000494504	GAS2L1	Q99501	681 aa	Predicted RBP	9.07	□□□□□ -0.96
KATNA1-208	ENST00000494504	ZNF576	Q9H609	170 aa		9.07	□□□□□ -0.96
KATNA1-208	ENST00000494504		A0A0G2JLL6	359 aa	Predicted RBP	9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	TTLL8	A6PVC2	850 aa		9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	TFF2	Q03403	129 aa		9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	CACNB2	Q08289	660 aa	Predicted RBP	9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	TCP10	Q12799	353 aa		9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	CHAF1A	Q13111	956 aa	Predicted RBP	9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	QPCT	Q16769	361 aa		9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	SH3D19	Q5HYK7	790 aa		9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	DUSP27	Q5VZP5	1158 aa		9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	SH3BP5L	Q7L8J4	393 aa		9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	PRRT2	Q7Z6L0	340 aa	Predicted RBP	9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	P2RX7	Q99572	595 aa	Known RBP	9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	METTL22	Q9BUU2	404 aa	Predicted RBP	9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	PRDM12	Q9H4Q4	367 aa		9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	GOPC	Q9HD26	462 aa		9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	BABAM1	Q9NWV8	329 aa		9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	LIMD1	Q9UGP4	676 aa		9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	TCF20	Q9UGU0	1960 aa	Known RBP	9.06	□□□□□ -0.96
KATNA1-208	ENST00000494504	ARAP2	Q8WZ64	1704 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	LOC100996750	A0A140TA64	210 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	TRIM75P	A6NK02	468 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	GYG1	P46976	350 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	SKIV2L	Q15477	1246 aa	Known RBP	9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	TMEM132A	Q24JP5	1023 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	TUSC1	Q2TAM9	212 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	TREML2	Q5T2D2	321 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	MAP3K21	Q5TCX8	1036 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	MYSM1	Q5VVJ2	828 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	C15orf52	Q6ZUT6	534 aa	Known RBP	9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	UBE3B	Q7Z3V4	1068 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	CCDC84	Q86UT8	332 aa	Predicted RBP	9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	FAM83A	Q86UY5	434 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	TEKT1	Q969V4	418 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	PCMTD1	Q96MG8	357 aa	Predicted RBP	9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	KRTAP4-6	Q9BYQ5	205 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	ZNF112	Q9UJU3	913 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	MAP3K2	Q9Y2U5	619 aa		9.05	□□□□□ -0.96
KATNA1-208	ENST00000494504	ELL2	O00472	640 aa	Predicted RBP	9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	CHL1	O00533	1208 aa		9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	PEX10	O60683	326 aa		9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	LILRB3	O75022	631 aa		9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	IGKV5-2	P06315	115 aa		9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	CLK2	P49760	499 aa	Known RBP	9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	KCNQ1	P51787	676 aa		9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	EPHB4	P54760	987 aa		9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	CCL14	Q16627	93 aa		9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	FAM110C	Q1W6H9	321 aa		9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	CWF19L2	Q2TBE0	894 aa	Known RBP	9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	MICALL1	Q8N3F8	863 aa		9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	TIFA	Q96CG3	184 aa		9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	PICK1	Q9NRD5	415 aa		9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	POLR3E	Q9NVU0	708 aa		9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	9.04	□□□□□ -0.96
KATNA1-208	ENST00000494504	TRIM43B	A6NCK2	446 aa		9.03	□□□□□ -0.96
KATNA1-208	ENST00000494504	RNF225	M0QZC1	329 aa	Predicted RBP	9.03	□□□□□ -0.96
KATNA1-208	ENST00000494504	ZKSCAN1	P17029	563 aa	Predicted RBP	9.03	□□□□□ -0.96
KATNA1-208	ENST00000494504	PTPRA	P18433	802 aa		9.03	□□□□□ -0.96
KATNA1-208	ENST00000494504	PTS	Q03393	145 aa		9.03	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms