RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 STX8Q9UNK0 236 aa10.79□□□□□ -0.68
ABCA1-204ENST00000494467 SCAF8Q9UPN6 1271 aaKnown RBP10.79□□□□□ -0.68
ABCA1-204ENST00000494467 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.79□□□□□ -0.68
ABCA1-204ENST00000494467 STK36Q9NRP7 1315 aa10.79□□□□□ -0.68
ABCA1-204ENST00000494467 BAZ2BQ9UIF8 2168 aaKnown RBP10.78□□□□□ -0.68
ABCA1-204ENST00000494467 A0A1W2PRG0 241 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 GOLGA8BA8MQT2 603 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 GDF11O95390 407 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 CTDNEP1O95476 244 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 PDHBP11177 359 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 PTPRAP18433 802 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 INPP5BP32019 993 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 METAP2P50579 478 aaKnown RBP eCLIP10.78□□□□□ -0.68
ABCA1-204ENST00000494467 HMGN5P82970 282 aaKnown RBP10.78□□□□□ -0.68
ABCA1-204ENST00000494467 RTN1Q16799 776 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 SHROOM1Q2M3G4 852 aaPredicted RBP10.78□□□□□ -0.68
ABCA1-204ENST00000494467 ASPRV1Q53RT3 343 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 SH3D19Q5HYK7 790 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 GPATCH4Q5T3I0 446 aaKnown RBP10.78□□□□□ -0.68
ABCA1-204ENST00000494467 PRAMEF18Q5VWM3 479 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 BTNL9Q6UXG8 535 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 NFXL1Q6ZNB6 911 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 NBPF11Q86T75 865 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 ANKRD13AQ8IZ07 590 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 DCAF4Q8WV16 495 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 LPAR1Q92633 364 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 WRNIP1Q96S55 665 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 SPZ1Q9BXG8 430 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 CLIP2Q9UDT6 1046 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 SNCAIPQ9Y6H5 919 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 PASKQ96RG2 1323 aa10.78□□□□□ -0.68
ABCA1-204ENST00000494467 SPDYE5A6NIY4 337 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 GOLGA8AA7E2F4 631 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 C19orf81C9J6K1 198 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 MPHOSPH10O00566 681 aaKnown RBP10.77□□□□□ -0.69
ABCA1-204ENST00000494467 CDKL5O76039 1030 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 CDC27P30260 824 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 PPATQ06203 517 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 ZNF543Q08ER8 600 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 MAP1SQ66K74 1059 aaPredicted RBP10.77□□□□□ -0.69
ABCA1-204ENST00000494467 TMTC3Q6ZXV5 915 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 ARMC9Q7Z3E5 817 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 NSUN7Q8NE18 718 aaKnown RBP10.77□□□□□ -0.69
ABCA1-204ENST00000494467 RBM46Q8TBY0 533 aaKnown RBP10.77□□□□□ -0.69
ABCA1-204ENST00000494467 VCPKMTQ9H867 229 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 AS3MTQ9HBK9 375 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 RBM27Q9P2N5 1060 aaKnown RBP10.77□□□□□ -0.69
ABCA1-204ENST00000494467 MAD2L2Q9UI95 211 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 CIZ1Q9ULV3 898 aaPredicted RBP10.77□□□□□ -0.69
ABCA1-204ENST00000494467 CLEC11AQ9Y240 323 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 AFG3L2Q9Y4W6 797 aa10.77□□□□□ -0.69
ABCA1-204ENST00000494467 F5H6K3 240 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 CXCL11O14625 94 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 PRPF3O43395 683 aaKnown RBP10.76□□□□□ -0.69
ABCA1-204ENST00000494467 ADD1P35611 737 aaKnown RBP10.76□□□□□ -0.69
ABCA1-204ENST00000494467 USP14P54578 494 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 KLRC3Q07444 240 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 VGLL4Q14135 290 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 RAB3GAP1Q15042 981 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 CPLX2Q6PUV4 134 aaKnown RBP10.76□□□□□ -0.69
ABCA1-204ENST00000494467 MICU3Q86XE3 530 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 ERO1BQ86YB8 467 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 TEX2Q8IWB9 1127 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 NECAB1Q8N987 351 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 ZNF280CQ8ND82 737 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 CTCFLQ8NI51 663 aaPredicted RBP10.76□□□□□ -0.69
ABCA1-204ENST00000494467 ZKSCAN4Q969J2 545 aaPredicted RBP10.76□□□□□ -0.69
ABCA1-204ENST00000494467 MTMR8Q96EF0 704 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 LARP6Q9BRS8 491 aaKnown RBP10.76□□□□□ -0.69
ABCA1-204ENST00000494467 RNF26Q9BY78 433 aaPredicted RBP10.76□□□□□ -0.69
ABCA1-204ENST00000494467 RIOX1Q9H6W3 641 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 GPBP1L1Q9HC44 474 aaPredicted RBP10.76□□□□□ -0.69
ABCA1-204ENST00000494467 GOPCQ9HD26 462 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 KCNH4Q9UQ05 1017 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 MYH15Q9Y2K3 1946 aa10.76□□□□□ -0.69
ABCA1-204ENST00000494467 USP17L10C9JJH3 530 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 FMNL1O95466 1100 aaPredicted RBP10.75□□□□□ -0.69
ABCA1-204ENST00000494467 NDUFB10O96000 172 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 PARP1P09874 1014 aaKnown RBP10.75□□□□□ -0.69
ABCA1-204ENST00000494467 FDPSP14324 419 aaKnown RBP10.75□□□□□ -0.69
ABCA1-204ENST00000494467 BACE1P56817 501 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 FSTL1Q12841 308 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 PPIL2Q13356 520 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 CST9Q5W186 159 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 CCDC83Q8IWF9 413 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 SMC1BQ8NDV3 1235 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 ACER1Q8TDN7 264 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 HHIPL1Q96JK4 782 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 NCOA5Q9HCD5 579 aaKnown RBP10.75□□□□□ -0.69
ABCA1-204ENST00000494467 PICK1Q9NRD5 415 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 KIF3AQ9Y496 699 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 CSADQ9Y600 493 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 A0A0G2JMZ2 1700 aa10.75□□□□□ -0.69
ABCA1-204ENST00000494467 KLRF2D3W0D1 207 aa10.74□□□□□ -0.69
ABCA1-204ENST00000494467 TRAF5O00463 557 aa10.74□□□□□ -0.69
ABCA1-204ENST00000494467 WDR46O15213 610 aaKnown RBP10.74□□□□□ -0.69
ABCA1-204ENST00000494467 TOMM70O94826 608 aa10.74□□□□□ -0.69
ABCA1-204ENST00000494467 PDCP20941 246 aa10.74□□□□□ -0.69
ABCA1-204ENST00000494467 ECE1P42892 770 aa10.74□□□□□ -0.69
ABCA1-204ENST00000494467 CCT2P78371 535 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms