RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 INCENPQ9NQS7 918 aa17.53■□□□□ 0.4
ATG4B-224ENST00000494132 RBPJLQ9UBG7 517 aa17.53■□□□□ 0.4
ATG4B-224ENST00000494132 LAMA4Q16363 1823 aa17.52■□□□□ 0.4
ATG4B-224ENST00000494132 POTEFA5A3E0 1075 aa17.52■□□□□ 0.4
ATG4B-224ENST00000494132 FLT3LGP49771 235 aa17.52■□□□□ 0.4
ATG4B-224ENST00000494132 PRMT2P55345 433 aa17.52■□□□□ 0.4
ATG4B-224ENST00000494132 ZNF333Q96JL9 665 aa17.52■□□□□ 0.4
ATG4B-224ENST00000494132 MORF4L1Q9UBU8 362 aa17.52■□□□□ 0.4
ATG4B-224ENST00000494132 TMX2Q9Y320 296 aa17.52■□□□□ 0.4
ATG4B-224ENST00000494132 SPDYE16A6NNV3 312 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-224ENST00000494132 GSPT1P15170 499 aaKnown RBP17.51■□□□□ 0.39
ATG4B-224ENST00000494132 ELNP15502 786 aa17.51■□□□□ 0.39
ATG4B-224ENST00000494132 ERVK-9P63128 1117 aa17.51■□□□□ 0.39
ATG4B-224ENST00000494132 ERVK-24P63145 666 aa17.51■□□□□ 0.39
ATG4B-224ENST00000494132 FAM47AQ5JRC9 791 aa17.51■□□□□ 0.39
ATG4B-224ENST00000494132 CWC27Q6UX04 472 aaKnown RBP17.51■□□□□ 0.39
ATG4B-224ENST00000494132 ZNF444Q8N0Y2 327 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-224ENST00000494132 COA7Q96BR5 231 aa17.51■□□□□ 0.39
ATG4B-224ENST00000494132 PORCNQ9H237 461 aa17.51■□□□□ 0.39
ATG4B-224ENST00000494132 VCPKMTQ9H867 229 aa17.51■□□□□ 0.39
ATG4B-224ENST00000494132 KANSL2Q9H9L4 492 aa17.51■□□□□ 0.39
ATG4B-224ENST00000494132 TACC3Q9Y6A5 838 aa17.51■□□□□ 0.39
ATG4B-224ENST00000494132 ZNFX1Q9P2E3 1918 aaKnown RBP17.51■□□□□ 0.39
ATG4B-224ENST00000494132 CCDC171Q6TFL3 1326 aa17.5■□□□□ 0.39
ATG4B-224ENST00000494132 CNMDO75829 334 aa17.5■□□□□ 0.39
ATG4B-224ENST00000494132 GRK4P32298 578 aa17.5■□□□□ 0.39
ATG4B-224ENST00000494132 RGS19P49795 217 aa17.5■□□□□ 0.39
ATG4B-224ENST00000494132 MLLT1Q03111 559 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-224ENST00000494132 MTFR1Q15390 333 aa17.5■□□□□ 0.39
ATG4B-224ENST00000494132 NBPF11Q86T75 865 aa17.5■□□□□ 0.39
ATG4B-224ENST00000494132 GPRC5AQ8NFJ5 357 aa17.5■□□□□ 0.39
ATG4B-224ENST00000494132 SH2D4AQ9H788 454 aa17.5■□□□□ 0.39
ATG4B-224ENST00000494132 DIAPH3Q9NSV4 1193 aa17.5■□□□□ 0.39
ATG4B-224ENST00000494132 BRCA2P51587 3418 aa17.49■□□□□ 0.39
ATG4B-224ENST00000494132 HSPD1P10809 573 aaKnown RBP17.49■□□□□ 0.39
ATG4B-224ENST00000494132 HAND2P61296 217 aa17.49■□□□□ 0.39
ATG4B-224ENST00000494132 PDE4BQ07343 736 aa17.49■□□□□ 0.39
ATG4B-224ENST00000494132 TTC22Q5TAA0 569 aa17.49■□□□□ 0.39
ATG4B-224ENST00000494132 CEP95Q96GE4 821 aa17.49■□□□□ 0.39
ATG4B-224ENST00000494132 BTBD7Q9P203 1132 aa17.49■□□□□ 0.39
ATG4B-224ENST00000494132 BIN2Q9UBW5 565 aaPredicted RBP17.49■□□□□ 0.39
ATG4B-224ENST00000494132 ADCY3O60266 1144 aa17.48■□□□□ 0.39
ATG4B-224ENST00000494132 FLOT1O75955 427 aa17.48■□□□□ 0.39
ATG4B-224ENST00000494132 FGAP02671 866 aa17.48■□□□□ 0.39
ATG4B-224ENST00000494132 SLC3A2P08195 630 aaKnown RBP17.48■□□□□ 0.39
ATG4B-224ENST00000494132 TSPY3P0CV98 308 aa17.48■□□□□ 0.39
ATG4B-224ENST00000494132 TSPY8P0CW00 308 aa17.48■□□□□ 0.39
ATG4B-224ENST00000494132 WDR78Q5VTH9 848 aa17.48■□□□□ 0.39
ATG4B-224ENST00000494132 SKAP1Q86WV1 359 aa17.48■□□□□ 0.39
ATG4B-224ENST00000494132 CCAR1Q8IX12 1150 aaKnown RBP17.48■□□□□ 0.39
ATG4B-224ENST00000494132 LRRC47Q8N1G4 583 aaKnown RBP17.48■□□□□ 0.39
ATG4B-224ENST00000494132 CHMP4CQ96CF2 233 aa17.48■□□□□ 0.39
ATG4B-224ENST00000494132 NUP88Q99567 741 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-224ENST00000494132 ZNF287Q9HBT7 754 aa17.48■□□□□ 0.39
ATG4B-224ENST00000494132 PDE4DIPQ5VU43 2346 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 IGKV6D-41A0A0C4DH26 115 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 WDR46O15213 610 aaKnown RBP17.47■□□□□ 0.39
ATG4B-224ENST00000494132 EN2P19622 333 aaPredicted RBP17.47■□□□□ 0.39
ATG4B-224ENST00000494132 TFAP4Q01664 338 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 COG2Q14746 738 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 FAM83BQ5T0W9 1011 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 GTF3C2Q8WUA4 911 aaPredicted RBP17.47■□□□□ 0.39
ATG4B-224ENST00000494132 LPAR1Q92633 364 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 ATG4CQ96DT6 458 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 TMEM106CQ9BVX2 250 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 IL25Q9H293 177 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 GOPCQ9HD26 462 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 TOMM22Q9NS69 142 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 FBXO28Q9NVF7 368 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 CLIP2Q9UDT6 1046 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.47■□□□□ 0.39
ATG4B-224ENST00000494132 RABGAP1Q9Y3P9 1069 aa17.47■□□□□ 0.39
ATG4B-224ENST00000494132 CYP2B6P20813 491 aa17.46■□□□□ 0.39
ATG4B-224ENST00000494132 RRP12Q5JTH9 1297 aaKnown RBP17.46■□□□□ 0.39
ATG4B-224ENST00000494132 GPR142Q7Z601 462 aa17.46■□□□□ 0.39
ATG4B-224ENST00000494132 SLAIN1Q8ND83 568 aa17.46■□□□□ 0.39
ATG4B-224ENST00000494132 NEDD1Q8NHV4 660 aa17.46■□□□□ 0.39
ATG4B-224ENST00000494132 CWC22Q9HCG8 908 aaKnown RBP17.46■□□□□ 0.39
ATG4B-224ENST00000494132 NYAP2Q9P242 653 aa17.46■□□□□ 0.39
ATG4B-224ENST00000494132 GJD2Q9UKL4 321 aa17.46■□□□□ 0.39
ATG4B-224ENST00000494132 PLIN4Q96Q06 1357 aa17.45■□□□□ 0.38
ATG4B-224ENST00000494132 RANBP6O60518 1105 aaKnown RBP17.45■□□□□ 0.38
ATG4B-224ENST00000494132 NMT2O60551 498 aa17.45■□□□□ 0.38
ATG4B-224ENST00000494132 DSG3P32926 999 aa17.45■□□□□ 0.38
ATG4B-224ENST00000494132 ALX1Q15699 326 aa17.45■□□□□ 0.38
ATG4B-224ENST00000494132 LBX2Q6XYB7 198 aa17.45■□□□□ 0.38
ATG4B-224ENST00000494132 MTMR4Q9NYA4 1195 aa17.45■□□□□ 0.38
ATG4B-224ENST00000494132 PLXNA1Q9UIW2 1896 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 TSPY2A6NKD2 308 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 F5H6K3 240 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 NDUFB10O96000 172 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 INHAP05111 366 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 MAPK4P31152 587 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 KLRC3Q07444 240 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 TRIM32Q13049 653 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 IRF5Q13568 498 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 PLS1Q14651 629 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 PLEKHH3Q7Z736 793 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 TICAM2Q86XR7 235 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 NKX2-3Q8TAU0 364 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms