RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 C9IYK1 514 aa5.93□□□□□ -1.46
CLK1-213ENST00000492793 EOMESO95936 686 aa5.93□□□□□ -1.46
CLK1-213ENST00000492793 NFIAQ12857 509 aa5.93□□□□□ -1.46
CLK1-213ENST00000492793 DCAF15Q66K64 600 aa5.93□□□□□ -1.46
CLK1-213ENST00000492793 PPFIBP1Q86W92 1011 aa5.93□□□□□ -1.46
CLK1-213ENST00000492793 SHISA5Q8N114 240 aa5.93□□□□□ -1.46
CLK1-213ENST00000492793 DNAJB8Q8NHS0 232 aa5.93□□□□□ -1.46
CLK1-213ENST00000492793 DBNDD2Q9BQY9 259 aa5.93□□□□□ -1.46
CLK1-213ENST00000492793 PIF1Q9H611 641 aa5.93□□□□□ -1.46
CLK1-213ENST00000492793 CWC22Q9HCG8 908 aaKnown RBP5.93□□□□□ -1.46
CLK1-213ENST00000492793 SNTG2Q9NY99 539 aa5.93□□□□□ -1.46
CLK1-213ENST00000492793 SUGT1Q9Y2Z0 365 aa5.93□□□□□ -1.46
CLK1-213ENST00000492793 SHROOM4Q9ULL8 1493 aa5.93□□□□□ -1.46
CLK1-213ENST00000492793 GSC2O15499 205 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 PDPK1O15530 556 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 IGLV1-40P01703 118 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 ITGB2P05107 769 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 F13BP05160 661 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 ITIH2P19823 946 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 FSTP19883 344 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 SERINC3Q13530 473 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 SV2CQ496J9 727 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 MTERF2Q49AM1 385 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 NBPF12Q5TAG4 269 aaPredicted RBP5.92□□□□□ -1.46
CLK1-213ENST00000492793 HEATR6Q6AI08 1181 aaKnown RBP5.92□□□□□ -1.46
CLK1-213ENST00000492793 EEPD1Q7L9B9 569 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 SHKBP1Q8TBC3 707 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 RNF141Q8WVD5 230 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 SMARCC1Q92922 1105 aaPredicted RBP5.92□□□□□ -1.46
CLK1-213ENST00000492793 FGD4Q96M96 766 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 SPOCK3Q9BQ16 436 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 ASPNQ9BXN1 380 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 ASCC2Q9H1I8 757 aaPredicted RBP5.92□□□□□ -1.46
CLK1-213ENST00000492793 LRP2BPQ9P2M1 347 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 KCNH3Q9ULD8 1083 aa5.92□□□□□ -1.46
CLK1-213ENST00000492793 FAM221BA6H8Z2 402 aa5.91□□□□□ -1.46
CLK1-213ENST00000492793 FAM155AB1AL88 458 aaPredicted RBP5.91□□□□□ -1.46
CLK1-213ENST00000492793 LRRN2O75325 713 aa5.91□□□□□ -1.46
CLK1-213ENST00000492793 NAT2P11245 290 aa5.91□□□□□ -1.46
CLK1-213ENST00000492793 TCEAL1Q15170 157 aa5.91□□□□□ -1.46
CLK1-213ENST00000492793 NOL9Q5SY16 702 aaKnown RBP5.91□□□□□ -1.46
CLK1-213ENST00000492793 AXDND1Q5T1B0 1012 aaPredicted RBP5.91□□□□□ -1.46
CLK1-213ENST00000492793 KLHL6Q8WZ60 621 aa5.91□□□□□ -1.46
CLK1-213ENST00000492793 MKL1Q969V6 931 aa5.91□□□□□ -1.46
CLK1-213ENST00000492793 METTL22Q9BUU2 404 aaPredicted RBP5.91□□□□□ -1.46
CLK1-213ENST00000492793 GBP3Q9H0R5 595 aa5.91□□□□□ -1.46
CLK1-213ENST00000492793 PFDN2Q9UHV9 154 aa5.91□□□□□ -1.46
CLK1-213ENST00000492793 PCDHB12Q9Y5F1 795 aa5.91□□□□□ -1.46
CLK1-213ENST00000492793 RBAK-RBAKDNI3L0D1 243 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 AGRPO00253 132 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 MEIS1O00470 390 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 EPHX1P07099 455 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 H2AFB1P0C5Y9 115 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 H2AFB2P0C5Z0 115 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 AUHQ13825 339 aaKnown RBP5.9□□□□□ -1.46
CLK1-213ENST00000492793 RASA3Q14644 834 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 CLEC16AQ2KHT3 1053 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 MRM1Q6IN84 353 aaKnown RBP5.9□□□□□ -1.46
CLK1-213ENST00000492793 NOP9Q86U38 636 aaKnown RBP5.9□□□□□ -1.46
CLK1-213ENST00000492793 C7orf61Q8IZ16 206 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 FAM181AQ8N9Y4 354 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 ADCY4Q8NFM4 1077 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 GATA6Q92908 595 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 APBA2Q99767 749 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 HAUS7Q99871 368 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 CCDC113Q9H0I3 377 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 LEMD3Q9Y2U8 911 aa5.9□□□□□ -1.46
CLK1-213ENST00000492793 CNTNAP4Q9C0A0 1308 aa5.9□□□□□ -1.47
CLK1-213ENST00000492793 LOC105371045A0A1W2PR82 267 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 ANKRD34BA5PLL1 514 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 PRR33A8MZF0 331 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 CYP26A1O43174 497 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 SMARCA5O60264 1052 aaPredicted RBP5.89□□□□□ -1.47
CLK1-213ENST00000492793 SUSD5O60279 629 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 PROCP04070 461 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 ITGA4P13612 1032 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 KIR3DL1P43629 444 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 RSPO4Q2I0M5 234 aaPredicted RBP5.89□□□□□ -1.47
CLK1-213ENST00000492793 CDKAL1Q5VV42 579 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 MFSD4AQ8N468 514 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 BRF1Q92994 677 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 COX4I2Q96KJ9 171 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 FBXL18Q96ME1 805 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 HEXIM2Q96MH2 286 aaKnown RBP5.89□□□□□ -1.47
CLK1-213ENST00000492793 DNAJC7Q99615 494 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 DSCC1Q9BVC3 393 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 ZNF451Q9Y4E5 1061 aa5.89□□□□□ -1.47
CLK1-213ENST00000492793 DYRK3O43781 588 aa5.88□□□□□ -1.47
CLK1-213ENST00000492793 PPM1BO75688 479 aa5.88□□□□□ -1.47
CLK1-213ENST00000492793 FURINP09958 794 aa5.88□□□□□ -1.47
CLK1-213ENST00000492793 CD247P20963 164 aa5.88□□□□□ -1.47
CLK1-213ENST00000492793 SSRP1Q08945 709 aaKnown RBP5.88□□□□□ -1.47
CLK1-213ENST00000492793 SNW1Q13573 536 aaKnown RBP5.88□□□□□ -1.47
CLK1-213ENST00000492793 RASGRF1Q13972 1273 aa5.88□□□□□ -1.47
CLK1-213ENST00000492793 PPP2R5DQ14738 602 aa5.88□□□□□ -1.47
CLK1-213ENST00000492793 GIMAP6Q6P9H5 292 aa5.88□□□□□ -1.47
CLK1-213ENST00000492793 DTWD2Q8NBA8 298 aa5.88□□□□□ -1.47
CLK1-213ENST00000492793 LRRN4CLQ8ND94 238 aa5.88□□□□□ -1.47
CLK1-213ENST00000492793 GFOD1Q9NXC2 390 aa5.88□□□□□ -1.47
CLK1-213ENST00000492793 TMA7Q9Y2S6 64 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms