RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 RASA1P20936 1047 aa18■□□□□ 0.47
USP39-217ENST00000491659 CCNA1P78396 465 aa18■□□□□ 0.47
USP39-217ENST00000491659 IRX6P78412 446 aaPredicted RBP18■□□□□ 0.47
USP39-217ENST00000491659 LBX2Q6XYB7 198 aa18■□□□□ 0.47
USP39-217ENST00000491659 TICAM2Q86XR7 235 aa18■□□□□ 0.47
USP39-217ENST00000491659 VCPKMTQ9H867 229 aa18■□□□□ 0.47
USP39-217ENST00000491659 HELLSQ9NRZ9 838 aa18■□□□□ 0.47
USP39-217ENST00000491659 TMX2Q9Y320 296 aa18■□□□□ 0.47
USP39-217ENST00000491659 RLFQ13129 1914 aa18■□□□□ 0.47
USP39-217ENST00000491659 SPDYE16A6NNV3 312 aaPredicted RBP17.99■□□□□ 0.47
USP39-217ENST00000491659 EEF2P13639 858 aaKnown RBP17.99■□□□□ 0.47
USP39-217ENST00000491659 ELNP15502 786 aa17.99■□□□□ 0.47
USP39-217ENST00000491659 EN2P19622 333 aaPredicted RBP17.99■□□□□ 0.47
USP39-217ENST00000491659 MTFR1Q15390 333 aa17.99■□□□□ 0.47
USP39-217ENST00000491659 CCDC129Q6ZRS4 1044 aa17.99■□□□□ 0.47
USP39-217ENST00000491659 SOCS4Q8WXH5 440 aa17.99■□□□□ 0.47
USP39-217ENST00000491659 RILPL2Q969X0 211 aa17.99■□□□□ 0.47
USP39-217ENST00000491659 GOPCQ9HD26 462 aa17.99■□□□□ 0.47
USP39-217ENST00000491659 CENPFP49454 3210 aa17.98■□□□□ 0.47
USP39-217ENST00000491659 WDR46O15213 610 aaKnown RBP17.98■□□□□ 0.47
USP39-217ENST00000491659 INHAP05111 366 aa17.98■□□□□ 0.47
USP39-217ENST00000491659 CCL5P13501 91 aa17.98■□□□□ 0.47
USP39-217ENST00000491659 PDE4BQ07343 736 aa17.98■□□□□ 0.47
USP39-217ENST00000491659 SIAH1Q8IUQ4 282 aa17.98■□□□□ 0.47
USP39-217ENST00000491659 PLEKHM2Q8IWE5 1019 aa17.98■□□□□ 0.47
USP39-217ENST00000491659 ZNF444Q8N0Y2 327 aaPredicted RBP17.98■□□□□ 0.47
USP39-217ENST00000491659 SPICE1Q8N0Z3 855 aa17.98■□□□□ 0.47
USP39-217ENST00000491659 TNRC18O15417 2968 aaPredicted RBP17.98■□□□□ 0.47
USP39-217ENST00000491659 CNMDO75829 334 aa17.97■□□□□ 0.47
USP39-217ENST00000491659 PPARAQ07869 468 aa17.97■□□□□ 0.47
USP39-217ENST00000491659 COG2Q14746 738 aa17.97■□□□□ 0.47
USP39-217ENST00000491659 Q3C1V9 767 aa17.97■□□□□ 0.47
USP39-217ENST00000491659 NKX2-3Q8TAU0 364 aa17.97■□□□□ 0.47
USP39-217ENST00000491659 NUDT12Q9BQG2 462 aa17.97■□□□□ 0.47
USP39-217ENST00000491659 RNF208Q9H0X6 261 aa17.97■□□□□ 0.47
USP39-217ENST00000491659 PORCNQ9H237 461 aa17.97■□□□□ 0.47
USP39-217ENST00000491659 OSBPL3Q9H4L5 887 aa17.97■□□□□ 0.47
USP39-217ENST00000491659 HOXC10Q9NYD6 342 aa17.97■□□□□ 0.47
USP39-217ENST00000491659 COL11A1P12107 1806 aaPredicted RBP17.97■□□□□ 0.47
USP39-217ENST00000491659 A0A0D9SFI3 127 aa17.96■□□□□ 0.47
USP39-217ENST00000491659 RAD21O60216 631 aa17.96■□□□□ 0.47
USP39-217ENST00000491659 PRDM1O75626 825 aa17.96■□□□□ 0.47
USP39-217ENST00000491659 FLOT1O75955 427 aa17.96■□□□□ 0.47
USP39-217ENST00000491659 HMGCRP04035 888 aa17.96■□□□□ 0.47
USP39-217ENST00000491659 MCMDC2Q4G0Z9 681 aa17.96■□□□□ 0.47
USP39-217ENST00000491659 KIAA1755Q5JYT7 1200 aa17.96■□□□□ 0.47
USP39-217ENST00000491659 WDR78Q5VTH9 848 aa17.96■□□□□ 0.47
USP39-217ENST00000491659 POTEEQ6S8J3 1075 aa17.96■□□□□ 0.47
USP39-217ENST00000491659 GPR142Q7Z601 462 aa17.96■□□□□ 0.47
USP39-217ENST00000491659 PLEKHH3Q7Z736 793 aa17.96■□□□□ 0.47
USP39-217ENST00000491659 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.96■□□□□ 0.47
USP39-217ENST00000491659 GJD2Q9UKL4 321 aa17.96■□□□□ 0.47
USP39-217ENST00000491659 PLIN4Q96Q06 1357 aa17.95■□□□□ 0.46
USP39-217ENST00000491659 TSPY3P0CV98 308 aa17.95■□□□□ 0.46
USP39-217ENST00000491659 TSPY8P0CW00 308 aa17.95■□□□□ 0.46
USP39-217ENST00000491659 CYP2B6P20813 491 aa17.95■□□□□ 0.46
USP39-217ENST00000491659 NMIQ13287 307 aaPredicted RBP17.95■□□□□ 0.46
USP39-217ENST00000491659 MB21D1Q8N884 522 aa17.95■□□□□ 0.46
USP39-217ENST00000491659 FAM227BQ96M60 508 aa17.95■□□□□ 0.46
USP39-217ENST00000491659 UNC93B1Q9H1C4 597 aa17.95■□□□□ 0.46
USP39-217ENST00000491659 BTBD7Q9P203 1132 aa17.95■□□□□ 0.46
USP39-217ENST00000491659 NYAP2Q9P242 653 aa17.95■□□□□ 0.46
USP39-217ENST00000491659 IVNS1ABPQ9Y6Y0 642 aa17.95■□□□□ 0.46
USP39-217ENST00000491659 ZNF236Q9UL36 1845 aa17.95■□□□□ 0.46
USP39-217ENST00000491659 GJB1P08034 283 aa17.94■□□□□ 0.46
USP39-217ENST00000491659 RGS2P41220 211 aa17.94■□□□□ 0.46
USP39-217ENST00000491659 CCDC171Q6TFL3 1326 aa17.94■□□□□ 0.46
USP39-217ENST00000491659 LAMA4Q16363 1823 aa17.93■□□□□ 0.46
USP39-217ENST00000491659 PDE4DIPQ5VU43 2346 aa17.93■□□□□ 0.46
USP39-217ENST00000491659 IGKV6D-41A0A0C4DH26 115 aa17.93■□□□□ 0.46
USP39-217ENST00000491659 FOXP2O15409 715 aa17.93■□□□□ 0.46
USP39-217ENST00000491659 DSG3P32926 999 aa17.93■□□□□ 0.46
USP39-217ENST00000491659 MFAP1P55081 439 aaKnown RBP17.93■□□□□ 0.46
USP39-217ENST00000491659 MORN1Q5T089 497 aa17.93■□□□□ 0.46
USP39-217ENST00000491659 VPS53Q5VIR6 699 aa17.93■□□□□ 0.46
USP39-217ENST00000491659 SAMD1Q6SPF0 538 aaPredicted RBP17.93■□□□□ 0.46
USP39-217ENST00000491659 TRMT44Q8IYL2 757 aaKnown RBP17.93■□□□□ 0.46
USP39-217ENST00000491659 APBA2Q99767 749 aa17.93■□□□□ 0.46
USP39-217ENST00000491659 HIP1O00291 1037 aa17.92■□□□□ 0.46
USP39-217ENST00000491659 XRCC5P13010 732 aaKnown RBP17.92■□□□□ 0.46
USP39-217ENST00000491659 ZKSCAN1P17029 563 aaPredicted RBP17.92■□□□□ 0.46
USP39-217ENST00000491659 SDSP20132 328 aa17.92■□□□□ 0.46
USP39-217ENST00000491659 GJA8P48165 433 aa17.92■□□□□ 0.46
USP39-217ENST00000491659 CTDSPL2Q05D32 466 aa17.92■□□□□ 0.46
USP39-217ENST00000491659 FAM83BQ5T0W9 1011 aa17.92■□□□□ 0.46
USP39-217ENST00000491659 TRIB2Q92519 343 aa17.92■□□□□ 0.46
USP39-217ENST00000491659 SHISA4Q96DD7 197 aa17.92■□□□□ 0.46
USP39-217ENST00000491659 ATG4CQ96DT6 458 aa17.92■□□□□ 0.46
USP39-217ENST00000491659 CEP95Q96GE4 821 aa17.92■□□□□ 0.46
USP39-217ENST00000491659 SPATC1LQ9H0A9 340 aa17.92■□□□□ 0.46
USP39-217ENST00000491659 DIAPH3Q9NSV4 1193 aa17.92■□□□□ 0.46
USP39-217ENST00000491659 ZMYM6O95789 1325 aa17.92■□□□□ 0.46
USP39-217ENST00000491659 SLC15A5A6NIM6 579 aa17.91■□□□□ 0.46
USP39-217ENST00000491659 TTLL1O95922 423 aa17.91■□□□□ 0.46
USP39-217ENST00000491659 MAP2K5Q13163 448 aa17.91■□□□□ 0.46
USP39-217ENST00000491659 PLS1Q14651 629 aa17.91■□□□□ 0.46
USP39-217ENST00000491659 ALX1Q15699 326 aa17.91■□□□□ 0.46
USP39-217ENST00000491659 FAM47AQ5JRC9 791 aa17.91■□□□□ 0.46
USP39-217ENST00000491659 PPP4R3BQ5MIZ7 849 aa17.91■□□□□ 0.46
USP39-217ENST00000491659 ZNF589Q86UQ0 364 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms