RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 APPP05067 770 aa12.4□□□□□ -0.42
RBM39-236ENST00000490484 CCNA1P78396 465 aa12.4□□□□□ -0.42
RBM39-236ENST00000490484 ATP2B2Q01814 1243 aa12.4□□□□□ -0.42
RBM39-236ENST00000490484 TRIM32Q13049 653 aa12.4□□□□□ -0.42
RBM39-236ENST00000490484 HDAC1Q13547 482 aaPredicted RBP12.4□□□□□ -0.42
RBM39-236ENST00000490484 PLEKHH3Q7Z736 793 aa12.4□□□□□ -0.42
RBM39-236ENST00000490484 LPAR1Q92633 364 aa12.4□□□□□ -0.42
RBM39-236ENST00000490484 GCC1Q96CN9 775 aa12.4□□□□□ -0.42
RBM39-236ENST00000490484 SEC62Q99442 399 aaKnown RBP12.4□□□□□ -0.42
RBM39-236ENST00000490484 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.4□□□□□ -0.42
RBM39-236ENST00000490484 PAK6Q9NQU5 681 aaPredicted RBP12.4□□□□□ -0.42
RBM39-236ENST00000490484 BTBD7Q9P203 1132 aa12.4□□□□□ -0.42
RBM39-236ENST00000490484 GREB1LQ9C091 1923 aaPredicted RBP12.4□□□□□ -0.42
RBM39-236ENST00000490484 RAD21O60216 631 aa12.39□□□□□ -0.43
RBM39-236ENST00000490484 SGPL1O95470 568 aa12.39□□□□□ -0.43
RBM39-236ENST00000490484 EEF2P13639 858 aaKnown RBP12.39□□□□□ -0.43
RBM39-236ENST00000490484 ZKSCAN1P17029 563 aaPredicted RBP12.39□□□□□ -0.43
RBM39-236ENST00000490484 GNAT2P19087 354 aa12.39□□□□□ -0.43
RBM39-236ENST00000490484 RGS2P41220 211 aa12.39□□□□□ -0.43
RBM39-236ENST00000490484 SBK1Q52WX2 424 aa12.39□□□□□ -0.43
RBM39-236ENST00000490484 GIMAP6Q6P9H5 292 aa12.39□□□□□ -0.43
RBM39-236ENST00000490484 SAMD1Q6SPF0 538 aaPredicted RBP12.39□□□□□ -0.43
RBM39-236ENST00000490484 LBX2Q6XYB7 198 aa12.39□□□□□ -0.43
RBM39-236ENST00000490484 SIAH1Q8IUQ4 282 aa12.39□□□□□ -0.43
RBM39-236ENST00000490484 APBA2Q99767 749 aa12.39□□□□□ -0.43
RBM39-236ENST00000490484 VCPKMTQ9H867 229 aa12.39□□□□□ -0.43
RBM39-236ENST00000490484 TMX2Q9Y320 296 aa12.39□□□□□ -0.43
RBM39-236ENST00000490484 PARP14Q460N5 1801 aa12.39□□□□□ -0.43
RBM39-236ENST00000490484 RLFQ13129 1914 aa12.39□□□□□ -0.43
RBM39-236ENST00000490484 CEP290O15078 2479 aa12.38□□□□□ -0.43
RBM39-236ENST00000490484 FLOT1O75955 427 aa12.38□□□□□ -0.43
RBM39-236ENST00000490484 PRKAR2AP13861 404 aaKnown RBP12.38□□□□□ -0.43
RBM39-236ENST00000490484 RASA1P20936 1047 aa12.38□□□□□ -0.43
RBM39-236ENST00000490484 COG2Q14746 738 aa12.38□□□□□ -0.43
RBM39-236ENST00000490484 CCL14Q16627 93 aa12.38□□□□□ -0.43
RBM39-236ENST00000490484 MORN1Q5T089 497 aa12.38□□□□□ -0.43
RBM39-236ENST00000490484 UBE2Q1Q7Z7E8 422 aa12.38□□□□□ -0.43
RBM39-236ENST00000490484 KANSL2Q9H9L4 492 aa12.38□□□□□ -0.43
RBM39-236ENST00000490484 MKNK2Q9HBH9 465 aa12.38□□□□□ -0.43
RBM39-236ENST00000490484 WDR46O15213 610 aaKnown RBP12.37□□□□□ -0.43
RBM39-236ENST00000490484 PRDM1O75626 825 aa12.37□□□□□ -0.43
RBM39-236ENST00000490484 TFRCP02786 760 aaKnown RBP12.37□□□□□ -0.43
RBM39-236ENST00000490484 XRCC5P13010 732 aaKnown RBP12.37□□□□□ -0.43
RBM39-236ENST00000490484 PDE1AP54750 535 aa12.37□□□□□ -0.43
RBM39-236ENST00000490484 ZMYM1Q5SVZ6 1142 aa12.37□□□□□ -0.43
RBM39-236ENST00000490484 CCDC129Q6ZRS4 1044 aa12.37□□□□□ -0.43
RBM39-236ENST00000490484 USP6NLQ92738 828 aa12.37□□□□□ -0.43
RBM39-236ENST00000490484 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.37□□□□□ -0.43
RBM39-236ENST00000490484 NACAP1Q9BZK3 213 aa12.37□□□□□ -0.43
RBM39-236ENST00000490484 LNPKQ9C0E8 428 aa12.37□□□□□ -0.43
RBM39-236ENST00000490484 CRISPLD2Q9H0B8 497 aa12.37□□□□□ -0.43
RBM39-236ENST00000490484 GOPCQ9HD26 462 aa12.37□□□□□ -0.43
RBM39-236ENST00000490484 HMX1Q9NP08 348 aaPredicted RBP12.37□□□□□ -0.43
RBM39-236ENST00000490484 IVNS1ABPQ9Y6Y0 642 aa12.37□□□□□ -0.43
RBM39-236ENST00000490484 ZNF236Q9UL36 1845 aa12.37□□□□□ -0.43
RBM39-236ENST00000490484 RPTORQ8N122 1335 aa12.37□□□□□ -0.43
RBM39-236ENST00000490484 PATL2C9JE40 543 aaKnown RBP12.36□□□□□ -0.43
RBM39-236ENST00000490484 PTPREP23469 700 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 MAP2K5Q13163 448 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 GRB14Q14449 540 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 PLS1Q14651 629 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 MAP3K21Q5TCX8 1036 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 B4GALNT3Q6L9W6 998 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 TRMT44Q8IYL2 757 aaKnown RBP12.36□□□□□ -0.43
RBM39-236ENST00000490484 IFNL3Q8IZI9 196 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 EXOC6Q8TAG9 804 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 DPF3Q92784 378 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 EVI5LQ96CN4 794 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 ATG4CQ96DT6 458 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 MOV10L1Q9BXT6 1211 aaKnown RBP12.36□□□□□ -0.43
RBM39-236ENST00000490484 SPATC1LQ9H0A9 340 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 NAPBQ9H115 298 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 HOXC10Q9NYD6 342 aa12.36□□□□□ -0.43
RBM39-236ENST00000490484 RANBP2P49792 3224 aaKnown RBP12.35□□□□□ -0.43
RBM39-236ENST00000490484 COL11A1P12107 1806 aaPredicted RBP12.35□□□□□ -0.43
RBM39-236ENST00000490484 SLC15A5A6NIM6 579 aa12.35□□□□□ -0.43
RBM39-236ENST00000490484 H0YGN5 161 aa12.35□□□□□ -0.43
RBM39-236ENST00000490484 ERCC3P19447 782 aa12.35□□□□□ -0.43
RBM39-236ENST00000490484 DSG3P32926 999 aa12.35□□□□□ -0.43
RBM39-236ENST00000490484 PPARAQ07869 468 aa12.35□□□□□ -0.43
RBM39-236ENST00000490484 AAMPQ13685 434 aa12.35□□□□□ -0.43
RBM39-236ENST00000490484 FAM83BQ5T0W9 1011 aa12.35□□□□□ -0.43
RBM39-236ENST00000490484 MB21D1Q8N884 522 aa12.35□□□□□ -0.43
RBM39-236ENST00000490484 DIS3LQ8TF46 1054 aaKnown RBP12.35□□□□□ -0.43
RBM39-236ENST00000490484 NUP88Q99567 741 aaPredicted RBP12.35□□□□□ -0.43
RBM39-236ENST00000490484 HTATIP2Q9BUP3 242 aa12.35□□□□□ -0.43
RBM39-236ENST00000490484 ZNF287Q9HBT7 754 aa12.35□□□□□ -0.43
RBM39-236ENST00000490484 FBXO28Q9NVF7 368 aa12.35□□□□□ -0.43
RBM39-236ENST00000490484 STAP2Q9UGK3 403 aa12.35□□□□□ -0.43
RBM39-236ENST00000490484 FOXP2O15409 715 aa12.34□□□□□ -0.43
RBM39-236ENST00000490484 SLC34A2O95436 690 aa12.34□□□□□ -0.43
RBM39-236ENST00000490484 CCND3P30281 292 aaPredicted RBP12.34□□□□□ -0.43
RBM39-236ENST00000490484 CACNB2Q08289 660 aaPredicted RBP12.34□□□□□ -0.43
RBM39-236ENST00000490484 NCAPG2Q86XI2 1143 aa12.34□□□□□ -0.43
RBM39-236ENST00000490484 SMC5Q8IY18 1101 aa12.34□□□□□ -0.43
RBM39-236ENST00000490484 ZNF444Q8N0Y2 327 aaPredicted RBP12.34□□□□□ -0.43
RBM39-236ENST00000490484 CEP95Q96GE4 821 aa12.34□□□□□ -0.43
RBM39-236ENST00000490484 RWDD1Q9H446 243 aaPredicted RBP12.34□□□□□ -0.43
RBM39-236ENST00000490484 FLRT1Q9NZU1 646 aa12.34□□□□□ -0.43
RBM39-236ENST00000490484 MYH4Q9Y623 1939 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms