RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 GNPTABQ3T906 1256 aa6.03□□□□□ -1.44
CD46-216ENST00000490278 SFRP5Q5T4F7 317 aa6.03□□□□□ -1.44
CD46-216ENST00000490278 VHLLQ6RSH7 139 aa6.03□□□□□ -1.44
CD46-216ENST00000490278 DPH6Q7L8W6 267 aa6.03□□□□□ -1.44
CD46-216ENST00000490278 CELF2-AS1Q8N7Q2 184 aa6.03□□□□□ -1.44
CD46-216ENST00000490278 HEXIM2Q96MH2 286 aaKnown RBP6.03□□□□□ -1.44
CD46-216ENST00000490278 ASPNQ9BXN1 380 aa6.03□□□□□ -1.44
CD46-216ENST00000490278 OSBPL2Q9H1P3 480 aa6.03□□□□□ -1.44
CD46-216ENST00000490278 COL17A1Q9UMD9 1497 aaPredicted RBP6.02□□□□□ -1.44
CD46-216ENST00000490278 CNTNAP4Q9C0A0 1308 aa6.02□□□□□ -1.45
CD46-216ENST00000490278 IGF2BP3O00425 579 aaKnown RBP eCLIP6.02□□□□□ -1.45
CD46-216ENST00000490278 DDAH1O94760 285 aa6.02□□□□□ -1.45
CD46-216ENST00000490278 SLC7A5Q01650 507 aa6.02□□□□□ -1.45
CD46-216ENST00000490278 SERINC3Q13530 473 aa6.02□□□□□ -1.45
CD46-216ENST00000490278 NCAPHQ15003 741 aa6.02□□□□□ -1.45
CD46-216ENST00000490278 NBPF12Q5TAG4 269 aaPredicted RBP6.02□□□□□ -1.45
CD46-216ENST00000490278 C6orf15Q6UXA7 325 aaPredicted RBP6.02□□□□□ -1.45
CD46-216ENST00000490278 FAM178BQ8IXR5 827 aa6.02□□□□□ -1.45
CD46-216ENST00000490278 SMARCC1Q92922 1105 aaPredicted RBP6.02□□□□□ -1.45
CD46-216ENST00000490278 VWCEQ96DN2 955 aa6.02□□□□□ -1.45
CD46-216ENST00000490278 FBXL18Q96ME1 805 aa6.02□□□□□ -1.45
CD46-216ENST00000490278 ST7Q9NRC1 585 aa6.02□□□□□ -1.45
CD46-216ENST00000490278 PCDHB10Q9UN67 800 aa6.02□□□□□ -1.45
CD46-216ENST00000490278 C9IYK1 514 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 CBX7O95931 251 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 KIR3DL1P43629 444 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 CCDC144BQ3MJ40 725 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 ZMYM1Q5SVZ6 1142 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 TDRD10Q5VZ19 366 aaKnown RBP6.01□□□□□ -1.45
CD46-216ENST00000490278 C22orf34Q6ZV56 151 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 PPFIBP1Q86W92 1011 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 ZDHHC13Q8IUH4 622 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 CCDC144CPQ8IYA2 1237 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 MICAL1Q8TDZ2 1067 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 KLHL6Q8WZ60 621 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 MKL1Q969V6 931 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 ZNF512BQ96KM6 892 aaPredicted RBP6.01□□□□□ -1.45
CD46-216ENST00000490278 MKRN2Q9H000 416 aaKnown RBP6.01□□□□□ -1.45
CD46-216ENST00000490278 SEMA6BQ9H3T3 888 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 LEMD3Q9Y2U8 911 aa6.01□□□□□ -1.45
CD46-216ENST00000490278 GNAT3A8MTJ3 354 aa6□□□□□ -1.45
CD46-216ENST00000490278 B2RBV5 119 aa6□□□□□ -1.45
CD46-216ENST00000490278 GJB6O95452 261 aa6□□□□□ -1.45
CD46-216ENST00000490278 TP53P04637 393 aaPredicted RBP6□□□□□ -1.45
CD46-216ENST00000490278 ZNF865P0CJ78 1059 aaPredicted RBP6□□□□□ -1.45
CD46-216ENST00000490278 KIAA1211LQ6NV74 962 aa6□□□□□ -1.45
CD46-216ENST00000490278 ARHGAP27Q6ZUM4 889 aa6□□□□□ -1.45
CD46-216ENST00000490278 ZSWIM4Q9H7M6 989 aa6□□□□□ -1.45
CD46-216ENST00000490278 MKNK2Q9HBH9 465 aa6□□□□□ -1.45
CD46-216ENST00000490278 FAM86C1Q9NVL1 165 aa6□□□□□ -1.45
CD46-216ENST00000490278 KCNH3Q9ULD8 1083 aa6□□□□□ -1.45
CD46-216ENST00000490278 PRR33A8MZF0 331 aa5.99□□□□□ -1.45
CD46-216ENST00000490278 CYP26A1O43174 497 aa5.99□□□□□ -1.45
CD46-216ENST00000490278 NFE2L2Q16236 605 aa5.99□□□□□ -1.45
CD46-216ENST00000490278 ANKRD39Q53RE8 183 aa5.99□□□□□ -1.45
CD46-216ENST00000490278 PRSS36Q5K4E3 855 aa5.99□□□□□ -1.45
CD46-216ENST00000490278 AXDND1Q5T1B0 1012 aaPredicted RBP5.99□□□□□ -1.45
CD46-216ENST00000490278 MFSD4AQ8N468 514 aa5.99□□□□□ -1.45
CD46-216ENST00000490278 Q96M66 194 aa5.99□□□□□ -1.45
CD46-216ENST00000490278 CCDC113Q9H0I3 377 aa5.99□□□□□ -1.45
CD46-216ENST00000490278 LRRC4CQ9HCJ2 640 aa5.99□□□□□ -1.45
CD46-216ENST00000490278 PIM2Q9P1W9 311 aa5.99□□□□□ -1.45
CD46-216ENST00000490278 MSRB2Q9Y3D2 182 aa5.99□□□□□ -1.45
CD46-216ENST00000490278 CAPN6Q9Y6Q1 641 aa5.99□□□□□ -1.45
CD46-216ENST00000490278 PRR19A6NJB7 356 aa5.98□□□□□ -1.45
CD46-216ENST00000490278 FAM155AB1AL88 458 aaPredicted RBP5.98□□□□□ -1.45
CD46-216ENST00000490278 LRRN2O75325 713 aa5.98□□□□□ -1.45
CD46-216ENST00000490278 OXCT1P55809 520 aa5.98□□□□□ -1.45
CD46-216ENST00000490278 AUHQ13825 339 aaKnown RBP5.98□□□□□ -1.45
CD46-216ENST00000490278 NBPF9Q3BBW0 867 aa5.98□□□□□ -1.45
CD46-216ENST00000490278 DCAF15Q66K64 600 aa5.98□□□□□ -1.45
CD46-216ENST00000490278 HEATR6Q6AI08 1181 aaKnown RBP5.98□□□□□ -1.45
CD46-216ENST00000490278 LRP10Q7Z4F1 713 aa5.98□□□□□ -1.45
CD46-216ENST00000490278 C7orf61Q8IZ16 206 aa5.98□□□□□ -1.45
CD46-216ENST00000490278 FAM181AQ8N9Y4 354 aa5.98□□□□□ -1.45
CD46-216ENST00000490278 DTWD2Q8NBA8 298 aa5.98□□□□□ -1.45
CD46-216ENST00000490278 PIWIL2Q8TC59 973 aaKnown RBP5.98□□□□□ -1.45
CD46-216ENST00000490278 HAUS7Q99871 368 aa5.98□□□□□ -1.45
CD46-216ENST00000490278 CDK11AQ9UQ88 783 aaPredicted RBP5.98□□□□□ -1.45
CD46-216ENST00000490278 PCDHB12Q9Y5F1 795 aa5.98□□□□□ -1.45
CD46-216ENST00000490278 KRTAP4-8A0A0G2JLE6 195 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 CCDC85CA6NKD9 419 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 BTBD11A6QL63 1104 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 SHOXO15266 292 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 CEACAM5P06731 702 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 EPHX1P07099 455 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 NAT2P11245 290 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 FOSL1P15407 271 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 ITIH2P19823 946 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 ZNF143P52747 638 aaPredicted RBP5.97□□□□□ -1.45
CD46-216ENST00000490278 TNK2Q07912 1038 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 RASA3Q14644 834 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 BMS1Q14692 1282 aaKnown RBP5.97□□□□□ -1.45
CD46-216ENST00000490278 TCEAL1Q15170 157 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 MRM1Q6IN84 353 aaKnown RBP5.97□□□□□ -1.45
CD46-216ENST00000490278 EEPD1Q7L9B9 569 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 DEPDC7Q96QD5 511 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 SRPK1Q96SB4 655 aaKnown RBP5.97□□□□□ -1.45
CD46-216ENST00000490278 SNTG2Q9NY99 539 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 FBXL21Q9UKT6 434 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms