RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 LSG1Q9H089 658 aaKnown RBP13.1□□□□□ -0.31
CPSF7-212ENST00000489728 TSKSQ9UJT2 592 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 MYPNQ86TC9 1320 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 EPB41L2O43491 1005 aaKnown RBP13.09□□□□□ -0.31
CPSF7-212ENST00000489728 RANBP6O60518 1105 aaKnown RBP13.09□□□□□ -0.31
CPSF7-212ENST00000489728 SP3Q02447 781 aa13.09□□□□□ -0.31
CPSF7-212ENST00000489728 PTH1RQ03431 593 aa13.09□□□□□ -0.31
CPSF7-212ENST00000489728 LBX2Q6XYB7 198 aa13.09□□□□□ -0.31
CPSF7-212ENST00000489728 GMCL1P1Q8NEA9 526 aa13.09□□□□□ -0.31
CPSF7-212ENST00000489728 TTC14Q96N46 770 aa13.09□□□□□ -0.31
CPSF7-212ENST00000489728 ASCC2Q9H1I8 757 aaPredicted RBP13.09□□□□□ -0.31
CPSF7-212ENST00000489728 MYH4Q9Y623 1939 aa13.09□□□□□ -0.31
CPSF7-212ENST00000489728 GNRH1P01148 92 aa13.08□□□□□ -0.32
CPSF7-212ENST00000489728 CYP21A2P08686 494 aa13.08□□□□□ -0.32
CPSF7-212ENST00000489728 BCRP11274 1271 aa13.08□□□□□ -0.32
CPSF7-212ENST00000489728 ZYXQ15942 572 aaKnown RBP13.08□□□□□ -0.32
CPSF7-212ENST00000489728 FAM110CQ1W6H9 321 aa13.08□□□□□ -0.32
CPSF7-212ENST00000489728 FAM47AQ5JRC9 791 aa13.08□□□□□ -0.32
CPSF7-212ENST00000489728 CATSPERGQ6ZRH7 1159 aa13.08□□□□□ -0.32
CPSF7-212ENST00000489728 CLEC10AQ8IUN9 316 aa13.08□□□□□ -0.32
CPSF7-212ENST00000489728 R3HDMLQ9H3Y0 253 aa13.08□□□□□ -0.32
CPSF7-212ENST00000489728 ANO2Q9NQ90 1003 aa13.08□□□□□ -0.32
CPSF7-212ENST00000489728 TOMM22Q9NS69 142 aa13.08□□□□□ -0.32
CPSF7-212ENST00000489728 RBM8AQ9Y5S9 174 aaKnown RBP13.08□□□□□ -0.32
CPSF7-212ENST00000489728 TACC3Q9Y6A5 838 aa13.08□□□□□ -0.32
CPSF7-212ENST00000489728 NEDD4P46934 1319 aa13.08□□□□□ -0.32
CPSF7-212ENST00000489728 A0A0G2JMZ2 1700 aa13.08□□□□□ -0.32
CPSF7-212ENST00000489728 EIF5BO60841 1220 aaKnown RBP13.07□□□□□ -0.32
CPSF7-212ENST00000489728 REC8O95072 547 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 CYP2C8P10632 490 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 HERVK_113P62684 666 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 LACTBP83111 547 aaPredicted RBP13.07□□□□□ -0.32
CPSF7-212ENST00000489728 ATP2B2Q01814 1243 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 TRDNQ13061 729 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 DGKZQ13574 1117 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 KIF22Q14807 665 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 PKN2Q16513 984 aaKnown RBP13.07□□□□□ -0.32
CPSF7-212ENST00000489728 RNF20Q5VTR2 975 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 IQCA1Q86XH1 822 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 GMCL1Q96IK5 515 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 RPAP3Q9H6T3 665 aaPredicted RBP13.07□□□□□ -0.32
CPSF7-212ENST00000489728 IL17RBQ9NRM6 502 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 HOXC10Q9NYD6 342 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 MORF4L1Q9UBU8 362 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 CLIP2Q9UDT6 1046 aa13.07□□□□□ -0.32
CPSF7-212ENST00000489728 F5H6K3 240 aa13.06□□□□□ -0.32
CPSF7-212ENST00000489728 KLRC3Q07444 240 aa13.06□□□□□ -0.32
CPSF7-212ENST00000489728 COG2Q14746 738 aa13.06□□□□□ -0.32
CPSF7-212ENST00000489728 NECTIN1Q15223 517 aa13.06□□□□□ -0.32
CPSF7-212ENST00000489728 RRP12Q5JTH9 1297 aaKnown RBP13.06□□□□□ -0.32
CPSF7-212ENST00000489728 CTU1Q7Z7A3 348 aaKnown RBP13.06□□□□□ -0.32
CPSF7-212ENST00000489728 DGKHQ86XP1 1220 aa13.06□□□□□ -0.32
CPSF7-212ENST00000489728 MB21D1Q8N884 522 aa13.06□□□□□ -0.32
CPSF7-212ENST00000489728 INCENPQ9NQS7 918 aa13.06□□□□□ -0.32
CPSF7-212ENST00000489728 STX8Q9UNK0 236 aa13.06□□□□□ -0.32
CPSF7-212ENST00000489728 CASP8AP2Q9UKL3 1982 aa13.06□□□□□ -0.32
CPSF7-212ENST00000489728 PARP14Q460N5 1801 aa13.06□□□□□ -0.32
CPSF7-212ENST00000489728 KDM4AO75164 1064 aa13.05□□□□□ -0.32
CPSF7-212ENST00000489728 NDUFB10O96000 172 aa13.05□□□□□ -0.32
CPSF7-212ENST00000489728 TOP1P11387 765 aaKnown RBP13.05□□□□□ -0.32
CPSF7-212ENST00000489728 PRMT2P55345 433 aa13.05□□□□□ -0.32
CPSF7-212ENST00000489728 RALYLQ86SE5 291 aaKnown RBP13.05□□□□□ -0.32
CPSF7-212ENST00000489728 NCOA7Q8NI08 942 aa13.05□□□□□ -0.32
CPSF7-212ENST00000489728 ANKS1AQ92625 1134 aa13.05□□□□□ -0.32
CPSF7-212ENST00000489728 MTA3Q9BTC8 594 aa13.05□□□□□ -0.32
CPSF7-212ENST00000489728 TANGO6Q9C0B7 1094 aa13.05□□□□□ -0.32
CPSF7-212ENST00000489728 CPA4Q9UI42 421 aa13.05□□□□□ -0.32
CPSF7-212ENST00000489728 RABGAP1Q9Y3P9 1069 aa13.05□□□□□ -0.32
CPSF7-212ENST00000489728 RLFQ13129 1914 aa13.05□□□□□ -0.32
CPSF7-212ENST00000489728 SPDYE16A6NNV3 312 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-212ENST00000489728 B4E1Z4 1266 aa13.04□□□□□ -0.32
CPSF7-212ENST00000489728 E7EWF7 191 aa13.04□□□□□ -0.32
CPSF7-212ENST00000489728 PLA2G6O60733 806 aa13.04□□□□□ -0.32
CPSF7-212ENST00000489728 TSGA10IPQ3SY00 556 aa13.04□□□□□ -0.32
CPSF7-212ENST00000489728 KIAA1755Q5JYT7 1200 aa13.04□□□□□ -0.32
CPSF7-212ENST00000489728 RCSD1Q6JBY9 416 aa13.04□□□□□ -0.32
CPSF7-212ENST00000489728 SPICE1Q8N0Z3 855 aa13.04□□□□□ -0.32
CPSF7-212ENST00000489728 LRRC47Q8N1G4 583 aaKnown RBP13.04□□□□□ -0.32
CPSF7-212ENST00000489728 ZSCAN10Q96SZ4 725 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-212ENST00000489728 P2RX7Q99572 595 aaKnown RBP13.04□□□□□ -0.32
CPSF7-212ENST00000489728 UBAC1Q9BSL1 405 aa13.04□□□□□ -0.32
CPSF7-212ENST00000489728 ZSWIM5Q9P217 1185 aa13.04□□□□□ -0.32
CPSF7-212ENST00000489728 SLC27A2O14975 620 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 NMT2O60551 498 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 FLOT1O75955 427 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 FDX1P10109 184 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 DSG3P32926 999 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 FCGRTP55899 365 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 CCNA1P78396 465 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 KRT32Q14532 448 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 SART3Q15020 963 aaKnown RBP13.03□□□□□ -0.32
CPSF7-212ENST00000489728 FAM83BQ5T0W9 1011 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 COL13A1Q5TAT6 717 aaPredicted RBP13.03□□□□□ -0.32
CPSF7-212ENST00000489728 CREB3L3Q68CJ9 461 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 SLFN13Q68D06 897 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 ANKRD13CQ8N6S4 541 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 GPRC5AQ8NFJ5 357 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 CD99L2Q8TCZ2 262 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 DCAF4Q8WV16 495 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 EFCC1Q9HA90 598 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms