RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 SSRP1Q08945 709 aaKnown RBP14.91□□□□□ -0.02
TOP3A-206ENST00000489131 ASPRV1Q53RT3 343 aa14.91□□□□□ -0.02
TOP3A-206ENST00000489131 DCAF15Q66K64 600 aa14.91□□□□□ -0.02
TOP3A-206ENST00000489131 CCDC144CPQ8IYA2 1237 aa14.91□□□□□ -0.02
TOP3A-206ENST00000489131 TRIM22Q8IYM9 498 aa14.91□□□□□ -0.02
TOP3A-206ENST00000489131 GMCL1P1Q8NEA9 526 aa14.91□□□□□ -0.02
TOP3A-206ENST00000489131 FBXO18Q8NFZ0 1043 aa14.91□□□□□ -0.02
TOP3A-206ENST00000489131 SPZ1Q9BXG8 430 aa14.91□□□□□ -0.02
TOP3A-206ENST00000489131 CABP5Q9NP86 173 aa14.91□□□□□ -0.02
TOP3A-206ENST00000489131 ZBTB21Q9ULJ3 1066 aa14.91□□□□□ -0.02
TOP3A-206ENST00000489131 ATAD5Q96QE3 1844 aa14.91□□□□□ -0.02
TOP3A-206ENST00000489131 CTNND1O60716 968 aaKnown RBP14.9□□□□□ -0.02
TOP3A-206ENST00000489131 PLEKHA8P1O95397 391 aa14.9□□□□□ -0.02
TOP3A-206ENST00000489131 GH2P01242 217 aa14.9□□□□□ -0.02
TOP3A-206ENST00000489131 ASNSP08243 561 aa14.9□□□□□ -0.02
TOP3A-206ENST00000489131 EEF2P13639 858 aaKnown RBP14.9□□□□□ -0.02
TOP3A-206ENST00000489131 ICA1Q05084 483 aa14.9□□□□□ -0.02
TOP3A-206ENST00000489131 SEPT2Q15019 361 aa14.9□□□□□ -0.02
TOP3A-206ENST00000489131 SRBD1Q8N5C6 995 aaKnown RBP14.9□□□□□ -0.02
TOP3A-206ENST00000489131 GBP4Q96PP9 640 aa14.9□□□□□ -0.02
TOP3A-206ENST00000489131 ATP6V1DQ9Y5K8 247 aa14.9□□□□□ -0.02
TOP3A-206ENST00000489131 DOCK1Q14185 1865 aa14.9□□□□□ -0.02
TOP3A-206ENST00000489131 MPHOSPH10O00566 681 aaKnown RBP14.89□□□□□ -0.03
TOP3A-206ENST00000489131 PARP1P09874 1014 aaKnown RBP14.89□□□□□ -0.03
TOP3A-206ENST00000489131 EPHX2P34913 555 aa14.89□□□□□ -0.03
TOP3A-206ENST00000489131 PKN1Q16512 942 aa14.89□□□□□ -0.03
TOP3A-206ENST00000489131 GPATCH4Q5T3I0 446 aaKnown RBP14.89□□□□□ -0.03
TOP3A-206ENST00000489131 CDC37L1Q7L3B6 337 aa14.89□□□□□ -0.03
TOP3A-206ENST00000489131 DCAF4Q8WV16 495 aa14.89□□□□□ -0.03
TOP3A-206ENST00000489131 PHKBQ93100 1093 aa14.89□□□□□ -0.03
TOP3A-206ENST00000489131 GMCL1Q96IK5 515 aa14.89□□□□□ -0.03
TOP3A-206ENST00000489131 ZSCAN16Q9H4T2 348 aaPredicted RBP14.89□□□□□ -0.03
TOP3A-206ENST00000489131 CLIP2Q9UDT6 1046 aa14.89□□□□□ -0.03
TOP3A-206ENST00000489131 MYH6P13533 1939 aa14.88□□□□□ -0.03
TOP3A-206ENST00000489131 POTECB2RU33 542 aa14.88□□□□□ -0.03
TOP3A-206ENST00000489131 GDF11O95390 407 aa14.88□□□□□ -0.03
TOP3A-206ENST00000489131 BAG4O95429 457 aaKnown RBP14.88□□□□□ -0.03
TOP3A-206ENST00000489131 ZNF543Q08ER8 600 aa14.88□□□□□ -0.03
TOP3A-206ENST00000489131 RESTQ13127 1097 aa14.88□□□□□ -0.03
TOP3A-206ENST00000489131 SHROOM1Q2M3G4 852 aaPredicted RBP14.88□□□□□ -0.03
TOP3A-206ENST00000489131 SUPT20HL1Q3ZLR7 823 aa14.88□□□□□ -0.03
TOP3A-206ENST00000489131 NBPF12Q5TAG4 269 aaPredicted RBP14.88□□□□□ -0.03
TOP3A-206ENST00000489131 PNMA8AQ86V59 439 aaPredicted RBP14.88□□□□□ -0.03
TOP3A-206ENST00000489131 CLEC10AQ8IUN9 316 aa14.88□□□□□ -0.03
TOP3A-206ENST00000489131 C8orf76Q96K31 380 aa14.88□□□□□ -0.03
TOP3A-206ENST00000489131 ALG1Q9BT22 464 aa14.88□□□□□ -0.03
TOP3A-206ENST00000489131 SLC26A6Q9BXS9 759 aa14.88□□□□□ -0.03
TOP3A-206ENST00000489131 ZNF341Q9BYN7 854 aa14.88□□□□□ -0.03
TOP3A-206ENST00000489131 TAF1DQ9H5J8 278 aaPredicted RBP14.88□□□□□ -0.03
TOP3A-206ENST00000489131 RIOX1Q9H6W3 641 aa14.88□□□□□ -0.03
TOP3A-206ENST00000489131 TMX2Q9Y320 296 aa14.88□□□□□ -0.03
TOP3A-206ENST00000489131 UTRNP46939 3433 aa14.87□□□□□ -0.03
TOP3A-206ENST00000489131 VPS37CA5D8V6 355 aaPredicted RBP14.87□□□□□ -0.03
TOP3A-206ENST00000489131 H3BQV1 296 aa14.87□□□□□ -0.03
TOP3A-206ENST00000489131 CYTH3O43739 400 aa14.87□□□□□ -0.03
TOP3A-206ENST00000489131 NFKBIBQ15653 356 aa14.87□□□□□ -0.03
TOP3A-206ENST00000489131 PFKFB3Q16875 520 aaPredicted RBP14.87□□□□□ -0.03
TOP3A-206ENST00000489131 SLC35G1Q2M3R5 365 aa14.87□□□□□ -0.03
TOP3A-206ENST00000489131 NOL9Q5SY16 702 aaKnown RBP14.87□□□□□ -0.03
TOP3A-206ENST00000489131 IFFO2Q5TF58 517 aa14.87□□□□□ -0.03
TOP3A-206ENST00000489131 MIGA2Q7L4E1 593 aa14.87□□□□□ -0.03
TOP3A-206ENST00000489131 LRRC47Q8N1G4 583 aaKnown RBP14.87□□□□□ -0.03
TOP3A-206ENST00000489131 STAG2Q8N3U4 1231 aa14.87□□□□□ -0.03
TOP3A-206ENST00000489131 DCPSQ96C86 337 aaKnown RBP14.87□□□□□ -0.03
TOP3A-206ENST00000489131 SH2D4AQ9H788 454 aa14.87□□□□□ -0.03
TOP3A-206ENST00000489131 ARHGEF10LQ9HCE6 1279 aa14.87□□□□□ -0.03
TOP3A-206ENST00000489131 SH3GLB2Q9NR46 395 aa14.87□□□□□ -0.03
TOP3A-206ENST00000489131 MYH15Q9Y2K3 1946 aa14.86□□□□□ -0.03
TOP3A-206ENST00000489131 USP17L5A8MUK1 530 aa14.86□□□□□ -0.03
TOP3A-206ENST00000489131 KLRF2D3W0D1 207 aa14.86□□□□□ -0.03
TOP3A-206ENST00000489131 DTNBO60941 627 aa14.86□□□□□ -0.03
TOP3A-206ENST00000489131 MCM4P33991 863 aa14.86□□□□□ -0.03
TOP3A-206ENST00000489131 KLRG1Q96E93 195 aa14.86□□□□□ -0.03
TOP3A-206ENST00000489131 MTMR8Q96EF0 704 aa14.86□□□□□ -0.03
TOP3A-206ENST00000489131 POLR2AP24928 1970 aaKnown RBP14.85□□□□□ -0.03
TOP3A-206ENST00000489131 A0A1W2PRG0 241 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 DDX11L8A8MPP1 907 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 F5H6K3 240 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 hCG_1984214I3L0E3 225 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 SCG2P13521 617 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 PTMSP20962 102 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 U2AF2P26368 475 aaKnown RBP eCLIP14.85□□□□□ -0.03
TOP3A-206ENST00000489131 AKAP17AQ02040 695 aaKnown RBP14.85□□□□□ -0.03
TOP3A-206ENST00000489131 KLRC3Q07444 240 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 KRT40Q6A162 431 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 ATL3Q6DD88 541 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 USP17L2Q6R6M4 530 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 BTNL9Q6UXG8 535 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 SULF1Q8IWU6 871 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 SCYL3Q8IZE3 742 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 CMTR1Q8N1G2 835 aaKnown RBP14.85□□□□□ -0.03
TOP3A-206ENST00000489131 ZNF713Q8N859 430 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-206ENST00000489131 TMEM87AQ8NBN3 555 aa14.85□□□□□ -0.03
TOP3A-206ENST00000489131 V9GY48 417 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-206ENST00000489131 PLA2G6O60733 806 aa14.84□□□□□ -0.03
TOP3A-206ENST00000489131 MMP1P03956 469 aa14.84□□□□□ -0.03
TOP3A-206ENST00000489131 XBP1P17861 261 aa14.84□□□□□ -0.03
TOP3A-206ENST00000489131 YY1P25490 414 aa14.84□□□□□ -0.03
TOP3A-206ENST00000489131 KIF23Q02241 960 aaPredicted RBP14.84□□□□□ -0.03
TOP3A-206ENST00000489131 SLFN13Q68D06 897 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms