RNA–Protein interactions for RNA: ENST00000488741.5

CREM-238, Transcript of cAMP responsive element modulator, human

TSL 2 BASIC

Gene CREM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-238	ENST00000488741	SYTL4	Q96C24	671 aa	Predicted RBP	5.84	□□□□□ -1.47
CREM-238	ENST00000488741	WDR24	Q96S15	920 aa		5.84	□□□□□ -1.47
CREM-238	ENST00000488741	CEP89	Q96ST8	783 aa		5.84	□□□□□ -1.47
CREM-238	ENST00000488741	EIF3C	Q99613	913 aa	Known RBP	5.84	□□□□□ -1.47
CREM-238	ENST00000488741	SIL1	Q9H173	461 aa		5.84	□□□□□ -1.47
CREM-238	ENST00000488741	UNC93B1	Q9H1C4	597 aa		5.84	□□□□□ -1.47
CREM-238	ENST00000488741	PDE11A	Q9HCR9	933 aa		5.84	□□□□□ -1.47
CREM-238	ENST00000488741	ZCCHC17	Q9NP64	241 aa	Known RBP	5.84	□□□□□ -1.47
CREM-238	ENST00000488741	GPR108	Q9NPR9	543 aa		5.84	□□□□□ -1.47
CREM-238	ENST00000488741	DDX21	Q9NR30	783 aa	Known RBP eCLIP	5.84	□□□□□ -1.47
CREM-238	ENST00000488741	TLR7	Q9NYK1	1049 aa	Known RBP	5.84	□□□□□ -1.47
CREM-238	ENST00000488741	RAI14	Q9P0K7	980 aa		5.84	□□□□□ -1.47
CREM-238	ENST00000488741	VPS18	Q9P253	973 aa		5.84	□□□□□ -1.47
CREM-238	ENST00000488741	LCMT1	Q9UIC8	334 aa		5.84	□□□□□ -1.47
CREM-238	ENST00000488741	TTF2	Q9UNY4	1162 aa	Known RBP	5.84	□□□□□ -1.47
CREM-238	ENST00000488741	KIAA1024	Q9UPX6	916 aa		5.84	□□□□□ -1.47
CREM-238	ENST00000488741	DDX60	Q8IY21	1712 aa	Known RBP	5.84	□□□□□ -1.47
CREM-238	ENST00000488741	SIPA1L3	O60292	1781 aa	Predicted RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	TMEM94	Q12767	1356 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	C4A	P0C0L4	1744 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	C4B	P0C0L5	1744 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	ADAMTS7	Q9UKP4	1686 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741		A0A087WWV3	80 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	CTAGE15	A4D2H0	777 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	CTAGE9	A4FU28	777 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741		A6NNZ2	444 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	AKR1B15	C9JRZ8	316 aa	Predicted RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	ATP5J2-PTCD1	G3V325	749 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	RNMT	O43148	476 aa	Known RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	WDHD1	O75717	1129 aa	Predicted RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	CDKL5	O76039	1030 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	CTAGE8	P0CG41	777 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	ATP1A3	P13637	1013 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	FDPS	P14324	419 aa	Known RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	ATP2B4	P23634	1241 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	AARS	P49588	968 aa	Known RBP eCLIP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	MMP16	P51512	607 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	GUCY1B3	Q02153	619 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	KIF23	Q02241	960 aa	Predicted RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	CASP8	Q14790	479 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	CWF19L2	Q2TBE0	894 aa	Known RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	EML3	Q32P44	896 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	TUBB8	Q3ZCM7	444 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	DNAJC21	Q5F1R6	531 aa	Known RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	RESP18	Q5W5W9	173 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	MCTP2	Q6DN12	878 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	KANK3	Q6NY19	840 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	CPLX2	Q6PUV4	134 aa	Known RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	MMS22L	Q6ZRQ5	1243 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	CTAGE6	Q86UF2	777 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	DZIP3	Q86Y13	1208 aa	Known RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	CTAGE4	Q8IX94	777 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	FAM177A1	Q8N128	213 aa	Predicted RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	AFAP1L1	Q8TED9	768 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	KAZALD1	Q96I82	304 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	RPGRIP1	Q96KN7	1286 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	CTAGE1	Q96RT6	745 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	TACO1	Q9BSH4	297 aa	Known RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	CDCA7	Q9BWT1	371 aa	Predicted RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	ANKZF1	Q9H8Y5	726 aa		5.83	□□□□□ -1.48
CREM-238	ENST00000488741	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	DBNL	Q9UJU6	430 aa	Known RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	5.83	□□□□□ -1.48
CREM-238	ENST00000488741	KDM6A	O15550	1401 aa	Predicted RBP	5.82	□□□□□ -1.48
CREM-238	ENST00000488741	TNR	Q92752	1358 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	ITIH6	Q6UXX5	1313 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	WDR17	Q8IZU2	1322 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	UNCX	A6NJT0	531 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	NEURL1B	A8MQ27	555 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	TMEM232	C9JQI7	657 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	CPLX1	O14810	134 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	PRMT3	O60678	531 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	ZFY	P08048	801 aa	Predicted RBP	5.82	□□□□□ -1.48
CREM-238	ENST00000488741	ZNF18	P17022	549 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	ERCC5	P28715	1186 aa	Predicted RBP	5.82	□□□□□ -1.48
CREM-238	ENST00000488741	RFX5	P48382	616 aa	Predicted RBP	5.82	□□□□□ -1.48
CREM-238	ENST00000488741	MMP14	P50281	582 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	TRIM14	Q14142	442 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	NR1I3	Q14994	352 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	IMMT	Q16891	758 aa	Known RBP	5.82	□□□□□ -1.48
CREM-238	ENST00000488741	KIF4B	Q2VIQ3	1234 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	RABL6	Q3YEC7	729 aa	Predicted RBP	5.82	□□□□□ -1.48
CREM-238	ENST00000488741	FILIP1L	Q4L180	1135 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	C1orf141	Q5JVX7	400 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	NT5DC1	Q5TFE4	455 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	NBPF14	Q5TI25	921 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	LRRC31	Q6UY01	552 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	GBP6	Q6ZN66	633 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	CCDC129	Q6ZRS4	1044 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	RASGRP2	Q7LDG7	609 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	TADA2B	Q86TJ2	420 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	PPFIBP1	Q86W92	1011 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	CNGA4	Q8IV77	575 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	PDILT	Q8N807	584 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	CNNM3	Q8NE01	707 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	ARMC2	Q8NEN0	867 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	CCDC148	Q8NFR7	591 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	IP6K1	Q92551	441 aa		5.82	□□□□□ -1.48
CREM-238	ENST00000488741	BAP1	Q92560	729 aa		5.82	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms