RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 IFNL1Q8IU54 200 aa22.8■■□□□ 1.24
PCOLCE-208ENST00000487172 JMYQ8N9B5 988 aa22.8■■□□□ 1.24
PCOLCE-208ENST00000487172 LPAR1Q92633 364 aa22.8■■□□□ 1.24
PCOLCE-208ENST00000487172 ZKSCAN3Q9BRR0 538 aa22.8■■□□□ 1.24
PCOLCE-208ENST00000487172 UBAC1Q9BSL1 405 aa22.8■■□□□ 1.24
PCOLCE-208ENST00000487172 TOP1P11387 765 aaKnown RBP22.79■■□□□ 1.24
PCOLCE-208ENST00000487172 PSMA5P28066 241 aa22.79■■□□□ 1.24
PCOLCE-208ENST00000487172 ANTXR2P58335 489 aa22.79■■□□□ 1.24
PCOLCE-208ENST00000487172 TMEM47Q9BQJ4 181 aa22.79■■□□□ 1.24
PCOLCE-208ENST00000487172 BACH2Q9BYV9 841 aa22.79■■□□□ 1.24
PCOLCE-208ENST00000487172 TM6SF1Q9BZW5 370 aa22.79■■□□□ 1.24
PCOLCE-208ENST00000487172 GOPCQ9HD26 462 aa22.79■■□□□ 1.24
PCOLCE-208ENST00000487172 AGTPBP1Q9UPW5 1226 aa22.79■■□□□ 1.24
PCOLCE-208ENST00000487172 SLC45A1Q9Y2W3 748 aa22.79■■□□□ 1.24
PCOLCE-208ENST00000487172 TNKSO95271 1327 aa22.79■■□□□ 1.24
PCOLCE-208ENST00000487172 WDR19Q8NEZ3 1342 aa22.79■■□□□ 1.24
PCOLCE-208ENST00000487172 BTBD19C9JJ37 291 aa22.78■■□□□ 1.24
PCOLCE-208ENST00000487172 F5H6K3 240 aa22.78■■□□□ 1.24
PCOLCE-208ENST00000487172 IGF2BP3O00425 579 aaKnown RBP eCLIP22.78■■□□□ 1.24
PCOLCE-208ENST00000487172 MAP2K1Q02750 393 aaPredicted RBP22.78■■□□□ 1.24
PCOLCE-208ENST00000487172 KLRC3Q07444 240 aa22.78■■□□□ 1.24
PCOLCE-208ENST00000487172 SART3Q15020 963 aaKnown RBP22.78■■□□□ 1.24
PCOLCE-208ENST00000487172 SEC23AQ15436 765 aa22.78■■□□□ 1.24
PCOLCE-208ENST00000487172 GADL1Q6ZQY3 521 aa22.78■■□□□ 1.24
PCOLCE-208ENST00000487172 DHX32Q7L7V1 743 aaKnown RBP22.78■■□□□ 1.24
PCOLCE-208ENST00000487172 ENAHQ8N8S7 591 aaPredicted RBP22.78■■□□□ 1.24
PCOLCE-208ENST00000487172 GMCL1P1Q8NEA9 526 aa22.78■■□□□ 1.24
PCOLCE-208ENST00000487172 TMEM87BQ96K49 555 aa22.78■■□□□ 1.24
PCOLCE-208ENST00000487172 ERICH2A1L162 156 aa22.77■■□□□ 1.24
PCOLCE-208ENST00000487172 PRC1O43663 620 aa22.77■■□□□ 1.24
PCOLCE-208ENST00000487172 ALDH1A1P00352 501 aa22.77■■□□□ 1.24
PCOLCE-208ENST00000487172 HOXA7P31268 230 aaPredicted RBP22.77■■□□□ 1.24
PCOLCE-208ENST00000487172 EXOSC10Q01780 885 aaKnown RBP22.77■■□□□ 1.24
PCOLCE-208ENST00000487172 PABPC4Q13310 644 aaKnown RBP eCLIP22.77■■□□□ 1.24
PCOLCE-208ENST00000487172 DGKZQ13574 1117 aa22.77■■□□□ 1.24
PCOLCE-208ENST00000487172 ZYXQ15942 572 aaKnown RBP22.77■■□□□ 1.24
PCOLCE-208ENST00000487172 FAM43AQ8N2R8 423 aa22.77■■□□□ 1.24
PCOLCE-208ENST00000487172 IGDCC4Q8TDY8 1250 aa22.77■■□□□ 1.24
PCOLCE-208ENST00000487172 JAKMIP1Q96N16 626 aaKnown RBP22.77■■□□□ 1.24
PCOLCE-208ENST00000487172 IFIT3O14879 490 aaKnown RBP22.76■■□□□ 1.23
PCOLCE-208ENST00000487172 COL9A3Q14050 684 aaPredicted RBP22.76■■□□□ 1.23
PCOLCE-208ENST00000487172 KIAA1755Q5JYT7 1200 aa22.76■■□□□ 1.23
PCOLCE-208ENST00000487172 TREML2Q5T2D2 321 aa22.76■■□□□ 1.23
PCOLCE-208ENST00000487172 CHST3Q7LGC8 479 aa22.76■■□□□ 1.23
PCOLCE-208ENST00000487172 LRRC47Q8N1G4 583 aaKnown RBP22.76■■□□□ 1.23
PCOLCE-208ENST00000487172 WDR46O15213 610 aaKnown RBP22.75■■□□□ 1.23
PCOLCE-208ENST00000487172 VCAM1P19320 739 aa22.75■■□□□ 1.23
PCOLCE-208ENST00000487172 IFIT1BQ5T764 474 aaKnown RBP22.75■■□□□ 1.23
PCOLCE-208ENST00000487172 BLOC1S2Q6QNY1 142 aa22.75■■□□□ 1.23
PCOLCE-208ENST00000487172 UPF2Q9HAU5 1272 aaKnown RBP22.75■■□□□ 1.23
PCOLCE-208ENST00000487172 ZSWIM6Q9HCJ5 1215 aa22.75■■□□□ 1.23
PCOLCE-208ENST00000487172 PDHXO00330 501 aa22.74■■□□□ 1.23
PCOLCE-208ENST00000487172 NDUFB10O96000 172 aa22.74■■□□□ 1.23
PCOLCE-208ENST00000487172 LIFRP42702 1097 aa22.74■■□□□ 1.23
PCOLCE-208ENST00000487172 WTAPQ15007 396 aa22.74■■□□□ 1.23
PCOLCE-208ENST00000487172 TMEM67Q5HYA8 995 aa22.74■■□□□ 1.23
PCOLCE-208ENST00000487172 SLFN13Q68D06 897 aa22.74■■□□□ 1.23
PCOLCE-208ENST00000487172 TMTC2Q8N394 836 aa22.74■■□□□ 1.23
PCOLCE-208ENST00000487172 FBXL16Q8N461 479 aa22.74■■□□□ 1.23
PCOLCE-208ENST00000487172 CFHR5Q9BXR6 569 aa22.74■■□□□ 1.23
PCOLCE-208ENST00000487172 C22orf23Q9BZE7 217 aa22.74■■□□□ 1.23
PCOLCE-208ENST00000487172 WBP1LQ9NX94 342 aa22.74■■□□□ 1.23
PCOLCE-208ENST00000487172 USP17L15C9J2P7 530 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 USP17L13C9JLJ4 530 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 USP17L11C9JVI0 530 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 USP17L18D6R9N7 530 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 USP17L22D6RA61 530 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 USP17L17D6RBQ6 530 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 USP17L19D6RCP7 530 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 USP17L20D6RJB6 530 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 SH2B2O14492 632 aaPredicted RBP22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 RPS6KB1P23443 525 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 RBM25P49756 843 aaKnown RBP22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 USP17L24Q0WX57 530 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 CATSPERGQ6ZRH7 1159 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 RUFY3Q7L099 469 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 GMCL1Q96IK5 515 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 RPAP3Q9H6T3 665 aaPredicted RBP22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 KAT14Q9H8E8 782 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 RNF186Q9NXI6 227 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 SAGE1Q9NXZ1 904 aa22.73■■□□□ 1.23
PCOLCE-208ENST00000487172 CASTP20810 708 aaKnown RBP22.72■■□□□ 1.23
PCOLCE-208ENST00000487172 OSBPP22059 807 aa22.72■■□□□ 1.23
PCOLCE-208ENST00000487172 SPICE1Q8N0Z3 855 aa22.72■■□□□ 1.23
PCOLCE-208ENST00000487172 PNMA1Q8ND90 353 aa22.72■■□□□ 1.23
PCOLCE-208ENST00000487172 LY9Q9HBG7 655 aa22.72■■□□□ 1.23
PCOLCE-208ENST00000487172 PNMA3Q9UL41 463 aa22.72■■□□□ 1.23
PCOLCE-208ENST00000487172 CA12O43570 354 aa22.71■■□□□ 1.23
PCOLCE-208ENST00000487172 SNHG28P0DPA3 235 aa22.71■■□□□ 1.23
PCOLCE-208ENST00000487172 DCAF4Q8WV16 495 aa22.71■■□□□ 1.23
PCOLCE-208ENST00000487172 CYP46A1Q9Y6A2 500 aa22.71■■□□□ 1.23
PCOLCE-208ENST00000487172 BMP3P12645 472 aa22.7■■□□□ 1.22
PCOLCE-208ENST00000487172 CPA1P15085 419 aa22.7■■□□□ 1.22
PCOLCE-208ENST00000487172 SGMS1Q86VZ5 419 aa22.7■■□□□ 1.22
PCOLCE-208ENST00000487172 PARK7Q99497 189 aaKnown RBP22.7■■□□□ 1.22
PCOLCE-208ENST00000487172 BEGAINQ9BUH8 593 aa22.7■■□□□ 1.22
PCOLCE-208ENST00000487172 AGXT2Q9BYV1 514 aa22.7■■□□□ 1.22
PCOLCE-208ENST00000487172 ASCC2Q9H1I8 757 aaPredicted RBP22.7■■□□□ 1.22
PCOLCE-208ENST00000487172 ZFYVE28Q9HCC9 887 aa22.7■■□□□ 1.22
PCOLCE-208ENST00000487172 RAD21O60216 631 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms