RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 OFD1O75665 1012 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 MTFR1Q15390 333 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 KLHL40Q2TBA0 621 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 C12orf60Q5U649 245 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 SLAIN1Q8ND83 568 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 STRBPQ96SI9 672 aaKnown RBP12.69□□□□□ -0.38
DDX56-212ENST00000485367 KIAA1683Q9H0B3 1180 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 MORF4L1Q9UBU8 362 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 USP17L15C9J2P7 530 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 USP17L13C9JLJ4 530 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 USP17L11C9JVI0 530 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 USP17L18D6R9N7 530 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 USP17L22D6RA61 530 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 USP17L17D6RBQ6 530 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 USP17L19D6RCP7 530 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 USP17L20D6RJB6 530 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 GLRX3O76003 335 aaKnown RBP12.69□□□□□ -0.38
DDX56-212ENST00000485367 ELNP15502 786 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 MX1P20591 662 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 USP17L24Q0WX57 530 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 GPRC5AQ8NFJ5 357 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 APPBP2Q92624 585 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 OSBP2Q969R2 916 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 C12orf42Q96LP6 360 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 TXNRD2Q9NNW7 524 aa12.69□□□□□ -0.38
DDX56-212ENST00000485367 K7ELQ4 463 aaPredicted RBP12.68□□□□□ -0.38
DDX56-212ENST00000485367 ZFYP08048 801 aaPredicted RBP12.68□□□□□ -0.38
DDX56-212ENST00000485367 CCL5P13501 91 aa12.68□□□□□ -0.38
DDX56-212ENST00000485367 AKR1B1P15121 316 aa12.68□□□□□ -0.38
DDX56-212ENST00000485367 NASPP49321 788 aaPredicted RBP12.68□□□□□ -0.38
DDX56-212ENST00000485367 CDK8P49336 464 aa12.68□□□□□ -0.38
DDX56-212ENST00000485367 UBXN2AP68543 259 aa12.68□□□□□ -0.38
DDX56-212ENST00000485367 CTR9Q6PD62 1173 aa12.68□□□□□ -0.38
DDX56-212ENST00000485367 TMEM179Q6ZVK1 233 aa12.68□□□□□ -0.38
DDX56-212ENST00000485367 GAS2L3Q86XJ1 694 aa12.68□□□□□ -0.38
DDX56-212ENST00000485367 PI4K2BQ8TCG2 481 aa12.68□□□□□ -0.38
DDX56-212ENST00000485367 PAGR1Q9BTK6 254 aa12.68□□□□□ -0.38
DDX56-212ENST00000485367 RBPJLQ9UBG7 517 aa12.68□□□□□ -0.38
DDX56-212ENST00000485367 VCAM1P19320 739 aa12.67□□□□□ -0.38
DDX56-212ENST00000485367 IRF5Q13568 498 aa12.67□□□□□ -0.38
DDX56-212ENST00000485367 LRRFIP1Q32MZ4 808 aaKnown RBP12.67□□□□□ -0.38
DDX56-212ENST00000485367 CCAR1Q8IX12 1150 aaKnown RBP12.67□□□□□ -0.38
DDX56-212ENST00000485367 GTF3C2Q8WUA4 911 aaPredicted RBP12.67□□□□□ -0.38
DDX56-212ENST00000485367 GCC1Q96CN9 775 aa12.67□□□□□ -0.38
DDX56-212ENST00000485367 FSD1Q9BTV5 496 aa12.67□□□□□ -0.38
DDX56-212ENST00000485367 RNF208Q9H0X6 261 aa12.67□□□□□ -0.38
DDX56-212ENST00000485367 A0A1W2PRG0 241 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 GSG1L2A8MUP6 293 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 M0R2C6 588 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 GPAA1O43292 621 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 INHAP05111 366 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 MSNP26038 577 aaKnown RBP12.66□□□□□ -0.38
DDX56-212ENST00000485367 ZNF445P59923 1031 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 CATSPERGQ6ZRH7 1159 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 KIAA1211Q6ZU35 1233 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 C16orf86Q6ZW13 317 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 MTERF4Q7Z6M4 381 aaKnown RBP12.66□□□□□ -0.38
DDX56-212ENST00000485367 CLEC10AQ8IUN9 316 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 PXYLP1Q8TE99 480 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 CCDC17Q96LX7 622 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 RPAP3Q9H6T3 665 aaPredicted RBP12.66□□□□□ -0.38
DDX56-212ENST00000485367 ARPP21Q9UBL0 812 aaPredicted RBP12.66□□□□□ -0.38
DDX56-212ENST00000485367 MINDY4BA8MYZ0 360 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 APPP05067 770 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 ERVK-9P63128 1117 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 ERVK-24P63145 666 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 Q3C1V9 767 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 POTEEQ6S8J3 1075 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 CHD1LQ86WJ1 897 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 STK11IPQ8N1F8 1099 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 UNC93B1Q9H1C4 597 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 GJD2Q9UKL4 321 aa12.66□□□□□ -0.38
DDX56-212ENST00000485367 PDIA4P13667 645 aaKnown RBP12.65□□□□□ -0.38
DDX56-212ENST00000485367 GNAT2P19087 354 aa12.65□□□□□ -0.38
DDX56-212ENST00000485367 ATP2B2Q01814 1243 aa12.65□□□□□ -0.38
DDX56-212ENST00000485367 ICA1Q05084 483 aa12.65□□□□□ -0.38
DDX56-212ENST00000485367 GIMAP6Q6P9H5 292 aa12.65□□□□□ -0.38
DDX56-212ENST00000485367 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.38
DDX56-212ENST00000485367 ARHGEF10LQ9HCE6 1279 aa12.65□□□□□ -0.38
DDX56-212ENST00000485367 RABGAP1Q9Y3P9 1069 aa12.65□□□□□ -0.38
DDX56-212ENST00000485367 A0A0U1RQG5 324 aaPredicted RBP12.64□□□□□ -0.39
DDX56-212ENST00000485367 GJB1P08034 283 aa12.64□□□□□ -0.39
DDX56-212ENST00000485367 CYP2B6P20813 491 aa12.64□□□□□ -0.39
DDX56-212ENST00000485367 MAPK4P31152 587 aa12.64□□□□□ -0.39
DDX56-212ENST00000485367 MCM5P33992 734 aa12.64□□□□□ -0.39
DDX56-212ENST00000485367 TDO2P48775 406 aa12.64□□□□□ -0.39
DDX56-212ENST00000485367 SBK1Q52WX2 424 aa12.64□□□□□ -0.39
DDX56-212ENST00000485367 PRPF38BQ5VTL8 546 aaKnown RBP12.64□□□□□ -0.39
DDX56-212ENST00000485367 SIAH1Q8IUQ4 282 aa12.64□□□□□ -0.39
DDX56-212ENST00000485367 SEC62Q99442 399 aaKnown RBP12.64□□□□□ -0.39
DDX56-212ENST00000485367 KIF2CQ99661 725 aa12.64□□□□□ -0.39
DDX56-212ENST00000485367 PORCNQ9H237 461 aa12.64□□□□□ -0.39
DDX56-212ENST00000485367 CWC22Q9HCG8 908 aaKnown RBP12.64□□□□□ -0.39
DDX56-212ENST00000485367 SALL3Q9BXA9 1300 aa12.64□□□□□ -0.39
DDX56-212ENST00000485367 PLXNB2O15031 1838 aa12.64□□□□□ -0.39
DDX56-212ENST00000485367 ZNF500O60304 480 aaPredicted RBP12.64□□□□□ -0.39
DDX56-212ENST00000485367 CNMDO75829 334 aa12.64□□□□□ -0.39
DDX56-212ENST00000485367 NUCB2P80303 420 aa12.64□□□□□ -0.39
DDX56-212ENST00000485367 KIAA1755Q5JYT7 1200 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms