RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 KANSL2Q9H9L4 492 aa13.38□□□□□ -0.27
SORT1-204ENST00000482236 PEX10O60683 326 aa13.37□□□□□ -0.27
SORT1-204ENST00000482236 EEF2P13639 858 aaKnown RBP13.37□□□□□ -0.27
SORT1-204ENST00000482236 GUCY1A2P33402 732 aa13.37□□□□□ -0.27
SORT1-204ENST00000482236 IRX6P78412 446 aaPredicted RBP13.37□□□□□ -0.27
SORT1-204ENST00000482236 GPR142Q7Z601 462 aa13.37□□□□□ -0.27
SORT1-204ENST00000482236 TRMT44Q8IYL2 757 aaKnown RBP13.37□□□□□ -0.27
SORT1-204ENST00000482236 DPF3Q92784 378 aa13.37□□□□□ -0.27
SORT1-204ENST00000482236 DEFB118Q96PH6 123 aa13.37□□□□□ -0.27
SORT1-204ENST00000482236 VCPKMTQ9H867 229 aa13.37□□□□□ -0.27
SORT1-204ENST00000482236 TXNRD2Q9NNW7 524 aa13.37□□□□□ -0.27
SORT1-204ENST00000482236 HOXC10Q9NYD6 342 aa13.37□□□□□ -0.27
SORT1-204ENST00000482236 SPDYE16A6NNV3 312 aaPredicted RBP13.36□□□□□ -0.27
SORT1-204ENST00000482236 GSG1L2A8MUP6 293 aa13.36□□□□□ -0.27
SORT1-204ENST00000482236 PATL2C9JE40 543 aaKnown RBP13.36□□□□□ -0.27
SORT1-204ENST00000482236 WDR46O15213 610 aaKnown RBP13.36□□□□□ -0.27
SORT1-204ENST00000482236 PRDM1O75626 825 aa13.36□□□□□ -0.27
SORT1-204ENST00000482236 FARP2O94887 1054 aaPredicted RBP13.36□□□□□ -0.27
SORT1-204ENST00000482236 SLC4A3P48751 1232 aa13.36□□□□□ -0.27
SORT1-204ENST00000482236 PDE1AP54750 535 aa13.36□□□□□ -0.27
SORT1-204ENST00000482236 IKQ13123 557 aaPredicted RBP13.36□□□□□ -0.27
SORT1-204ENST00000482236 COG2Q14746 738 aa13.36□□□□□ -0.27
SORT1-204ENST00000482236 NCAPG2Q86XI2 1143 aa13.36□□□□□ -0.27
SORT1-204ENST00000482236 U2AF1L4Q8WU68 220 aaKnown RBP13.36□□□□□ -0.27
SORT1-204ENST00000482236 SEC62Q99442 399 aaKnown RBP13.36□□□□□ -0.27
SORT1-204ENST00000482236 APBA2Q99767 749 aa13.36□□□□□ -0.27
SORT1-204ENST00000482236 HTATIP2Q9BUP3 242 aa13.36□□□□□ -0.27
SORT1-204ENST00000482236 HMX1Q9NP08 348 aaPredicted RBP13.36□□□□□ -0.27
SORT1-204ENST00000482236 DIAPH3Q9NSV4 1193 aa13.36□□□□□ -0.27
SORT1-204ENST00000482236 RBPJLQ9UBG7 517 aa13.36□□□□□ -0.27
SORT1-204ENST00000482236 MYH8P13535 1937 aa13.36□□□□□ -0.27
SORT1-204ENST00000482236 BAZ2AQ9UIF9 1905 aaKnown RBP13.35□□□□□ -0.27
SORT1-204ENST00000482236 A0A1W2PRG0 241 aa13.35□□□□□ -0.27
SORT1-204ENST00000482236 GJB1P08034 283 aa13.35□□□□□ -0.27
SORT1-204ENST00000482236 MFAP1P55081 439 aaKnown RBP13.35□□□□□ -0.27
SORT1-204ENST00000482236 SBK1Q52WX2 424 aa13.35□□□□□ -0.27
SORT1-204ENST00000482236 ZMYM1Q5SVZ6 1142 aa13.35□□□□□ -0.27
SORT1-204ENST00000482236 MFSD14CQ5VZR4 134 aa13.35□□□□□ -0.27
SORT1-204ENST00000482236 CCDC129Q6ZRS4 1044 aa13.35□□□□□ -0.27
SORT1-204ENST00000482236 CHD1LQ86WJ1 897 aa13.35□□□□□ -0.27
SORT1-204ENST00000482236 IFNL3Q8IZI9 196 aa13.35□□□□□ -0.27
SORT1-204ENST00000482236 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.35□□□□□ -0.27
SORT1-204ENST00000482236 PORCNQ9H237 461 aa13.35□□□□□ -0.27
SORT1-204ENST00000482236 SLC5A4Q9NY91 659 aa13.35□□□□□ -0.27
SORT1-204ENST00000482236 TMX2Q9Y320 296 aa13.35□□□□□ -0.27
SORT1-204ENST00000482236 MGAMO43451 1857 aa13.35□□□□□ -0.27
SORT1-204ENST00000482236 TSPY2A6NKD2 308 aa13.34□□□□□ -0.27
SORT1-204ENST00000482236 PRKAR2AP13861 404 aaKnown RBP13.34□□□□□ -0.27
SORT1-204ENST00000482236 CNGA1P29973 690 aa13.34□□□□□ -0.27
SORT1-204ENST00000482236 GJA8P48165 433 aa13.34□□□□□ -0.27
SORT1-204ENST00000482236 PPARAQ07869 468 aa13.34□□□□□ -0.27
SORT1-204ENST00000482236 PPP4R3BQ5MIZ7 849 aa13.34□□□□□ -0.27
SORT1-204ENST00000482236 DPP9Q86TI2 863 aa13.34□□□□□ -0.27
SORT1-204ENST00000482236 MB21D1Q8N884 522 aa13.34□□□□□ -0.27
SORT1-204ENST00000482236 EPB41L4AQ9HCS5 686 aaPredicted RBP13.34□□□□□ -0.27
SORT1-204ENST00000482236 SMIM22K7EJ46 135 aa13.33□□□□□ -0.28
SORT1-204ENST00000482236 RANBP6O60518 1105 aaKnown RBP13.33□□□□□ -0.28
SORT1-204ENST00000482236 RASA1P20936 1047 aa13.33□□□□□ -0.28
SORT1-204ENST00000482236 Q3C1V9 767 aa13.33□□□□□ -0.28
SORT1-204ENST00000482236 RRP12Q5JTH9 1297 aaKnown RBP13.33□□□□□ -0.28
SORT1-204ENST00000482236 FAM83BQ5T0W9 1011 aa13.33□□□□□ -0.28
SORT1-204ENST00000482236 ATG4CQ96DT6 458 aa13.33□□□□□ -0.28
SORT1-204ENST00000482236 HELLSQ9NRZ9 838 aa13.33□□□□□ -0.28
SORT1-204ENST00000482236 CLIP2Q9UDT6 1046 aa13.33□□□□□ -0.28
SORT1-204ENST00000482236 MTMR7Q9Y216 660 aa13.33□□□□□ -0.28
SORT1-204ENST00000482236 ROBO3Q96MS0 1386 aa13.32□□□□□ -0.28
SORT1-204ENST00000482236 SLC15A5A6NIM6 579 aa13.32□□□□□ -0.28
SORT1-204ENST00000482236 SGPL1O95470 568 aa13.32□□□□□ -0.28
SORT1-204ENST00000482236 MYCNP04198 464 aaPredicted RBP13.32□□□□□ -0.28
SORT1-204ENST00000482236 MAP2K5Q13163 448 aa13.32□□□□□ -0.28
SORT1-204ENST00000482236 MCMDC2Q4G0Z9 681 aa13.32□□□□□ -0.28
SORT1-204ENST00000482236 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
SORT1-204ENST00000482236 LRRC47Q8N1G4 583 aaKnown RBP13.32□□□□□ -0.28
SORT1-204ENST00000482236 TRIB2Q92519 343 aa13.32□□□□□ -0.28
SORT1-204ENST00000482236 CHMP4CQ96CF2 233 aa13.32□□□□□ -0.28
SORT1-204ENST00000482236 SPATC1LQ9H0A9 340 aa13.32□□□□□ -0.28
SORT1-204ENST00000482236 BTBD7Q9P203 1132 aa13.32□□□□□ -0.28
SORT1-204ENST00000482236 STAP2Q9UGK3 403 aa13.32□□□□□ -0.28
SORT1-204ENST00000482236 STX8Q9UNK0 236 aa13.32□□□□□ -0.28
SORT1-204ENST00000482236 RPTORQ8N122 1335 aa13.32□□□□□ -0.28
SORT1-204ENST00000482236 RBBP6Q7Z6E9 1792 aaKnown RBP13.32□□□□□ -0.28
SORT1-204ENST00000482236 TTLL1O95922 423 aa13.31□□□□□ -0.28
SORT1-204ENST00000482236 ERCC3P19447 782 aa13.31□□□□□ -0.28
SORT1-204ENST00000482236 DSG3P32926 999 aa13.31□□□□□ -0.28
SORT1-204ENST00000482236 TFAP4Q01664 338 aa13.31□□□□□ -0.28
SORT1-204ENST00000482236 CTDSPL2Q05D32 466 aa13.31□□□□□ -0.28
SORT1-204ENST00000482236 NMIQ13287 307 aaPredicted RBP13.31□□□□□ -0.28
SORT1-204ENST00000482236 KIFC2Q96AC6 838 aa13.31□□□□□ -0.28
SORT1-204ENST00000482236 NUP88Q99567 741 aaPredicted RBP13.31□□□□□ -0.28
SORT1-204ENST00000482236 SLF1Q9BQI6 1058 aa13.31□□□□□ -0.28
SORT1-204ENST00000482236 MOV10L1Q9BXT6 1211 aaKnown RBP13.31□□□□□ -0.28
SORT1-204ENST00000482236 MROH8Q9H579 483 aa13.31□□□□□ -0.28
SORT1-204ENST00000482236 KIAA0100Q14667 2235 aaKnown RBP13.31□□□□□ -0.28
SORT1-204ENST00000482236 HIP1O00291 1037 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 ZBED4O75132 1171 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 CNMDO75829 334 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 SLC25A27O95847 323 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 FCER1AP12319 257 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 XRCC5P13010 732 aaKnown RBP13.3□□□□□ -0.28
SORT1-204ENST00000482236 PTPREP23469 700 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms