RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 PLCD4Q9BRC7 762 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 NEDD4P46934 1319 aa12.71□□□□□ -0.37
SMPD4-218ENST00000482171 USP17L3A6NCW0 530 aa12.71□□□□□ -0.38
SMPD4-218ENST00000482171 USP17L4A6NCW7 530 aa12.71□□□□□ -0.38
SMPD4-218ENST00000482171 SCG2P13521 617 aa12.71□□□□□ -0.38
SMPD4-218ENST00000482171 ARID5AQ03989 594 aa12.71□□□□□ -0.38
SMPD4-218ENST00000482171 NFIXQ14938 502 aa12.71□□□□□ -0.38
SMPD4-218ENST00000482171 USP17L1Q7RTZ2 530 aa12.71□□□□□ -0.38
SMPD4-218ENST00000482171 EEF2KMTQ96G04 330 aa12.71□□□□□ -0.38
SMPD4-218ENST00000482171 CLRN2A0PK11 232 aa12.71□□□□□ -0.38
SMPD4-218ENST00000482171 AKR1B10O60218 316 aa12.71□□□□□ -0.38
SMPD4-218ENST00000482171 FANCCQ00597 558 aa12.71□□□□□ -0.38
SMPD4-218ENST00000482171 DYMQ7RTS9 669 aa12.71□□□□□ -0.38
SMPD4-218ENST00000482171 REXO1Q8N1G1 1221 aaKnown RBP12.71□□□□□ -0.38
SMPD4-218ENST00000482171 FNBP4Q8N3X1 1017 aaPredicted RBP12.71□□□□□ -0.38
SMPD4-218ENST00000482171 TMEM87AQ8NBN3 555 aa12.71□□□□□ -0.38
SMPD4-218ENST00000482171 LINC00116Q8NCU8 138 aa12.71□□□□□ -0.38
SMPD4-218ENST00000482171 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.71□□□□□ -0.38
SMPD4-218ENST00000482171 ZNF609O15014 1411 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 BBOX1O75936 387 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 CAMTA2O94983 1202 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 BAG6P46379 1132 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 CACNB3P54284 484 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 KIF23Q02241 960 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-218ENST00000482171 SLC44A5Q8NCS7 719 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 BCS1LQ9Y276 419 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 CCDC175P0C221 793 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 RXRBP28702 533 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 OAS2P29728 719 aaKnown RBP12.7□□□□□ -0.38
SMPD4-218ENST00000482171 UBXN1Q04323 297 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 PDE4DQ08499 809 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 RESTQ13127 1097 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 LRRC8AQ8IWT6 810 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 ZNF34Q8IZ26 560 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 CDC25AP30304 524 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 SPAG1Q07617 926 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 NKX1-1Q15270 411 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-218ENST00000482171 TTC31Q49AM3 519 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-218ENST00000482171 WWC2Q6AWC2 1192 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 BLIDQ8IZY5 108 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 CPVLQ9H3G5 476 aa12.7□□□□□ -0.38
SMPD4-218ENST00000482171 OVOS2A0A0G2JMS6 1433 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 SEMA3EO15041 775 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 NMT2O60551 498 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 CFBP00751 764 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 DRC1Q96MC2 740 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 HOMER2Q9NSB8 354 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 MRVI1Q9Y6F6 885 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 ADCY7P51828 1080 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 PTGDRQ13258 359 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 ZNF569Q5MCW4 686 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 FAM84BQ96KN1 310 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-218ENST00000482171 JADE2Q9NQC1 790 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 LRWD1Q9UFC0 647 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 HSPA1LP34931 641 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 NLRP12P59046 1061 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 FAM114A1Q8IWE2 563 aa12.69□□□□□ -0.38
SMPD4-218ENST00000482171 XPO4Q9C0E2 1151 aaKnown RBP12.69□□□□□ -0.38
SMPD4-218ENST00000482171 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMPD4-218ENST00000482171 CSF1RP07333 972 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 MCM3P25205 808 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 PTPN21Q16825 1174 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 USP17L2Q6R6M4 530 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 SPICE1Q8N0Z3 855 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 SNX29Q8TEQ0 813 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 CTAGE1Q96RT6 745 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 BAG1Q99933 345 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-218ENST00000482171 PLEKHA8P1O95397 391 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 CCDC174Q6PII3 467 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 SCLT1Q96NL6 688 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 RTEL1Q9NZ71 1219 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 TBC1D7Q9P0N9 293 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 USP42Q9H9J4 1324 aaKnown RBP12.68□□□□□ -0.38
SMPD4-218ENST00000482171 GSG1L2A8MUP6 293 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 COBLO75128 1261 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 RAD17O75943 681 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-218ENST00000482171 CMA1P23946 247 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 ZSCAN26Q16670 478 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 SV2BQ7L1I2 683 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 CERS3Q8IU89 383 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 NIM1KQ8IY84 436 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 FLAD1Q8NFF5 587 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 SH3RF3Q8TEJ3 882 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-218ENST00000482171 SPAG5Q96R06 1193 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 UTYO14607 1347 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 UBN2Q6ZU65 1347 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 IFNAR1P17181 557 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 KRT25Q7Z3Z0 450 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 TAX1BP1Q86VP1 789 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 LINC00301Q8NCQ3 95 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 LRRC27Q9C0I9 530 aa12.68□□□□□ -0.38
SMPD4-218ENST00000482171 CTAGE9A4FU28 777 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 SLC16A2P36021 539 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 SSR1P43307 286 aaKnown RBP12.67□□□□□ -0.38
SMPD4-218ENST00000482171 NCBP1Q09161 790 aaKnown RBP12.67□□□□□ -0.38
SMPD4-218ENST00000482171 SLC39A14Q15043 492 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 DNAJC21Q5F1R6 531 aaKnown RBP12.67□□□□□ -0.38
SMPD4-218ENST00000482171 GRAMD1CQ8IYS0 662 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 PGBD1Q96JS3 809 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms