RNA–Protein interactions for RNA: ENST00000482017.1

MCF2L2-211, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-211ENST00000482017 VCPKMTQ9H867 229 aa22.07■■□□□ 1.12
MCF2L2-211ENST00000482017 GOPCQ9HD26 462 aa22.07■■□□□ 1.12
MCF2L2-211ENST00000482017 ERICH2A1L162 156 aa22.06■■□□□ 1.12
MCF2L2-211ENST00000482017 CASTP20810 708 aaKnown RBP22.06■■□□□ 1.12
MCF2L2-211ENST00000482017 MCM5P33992 734 aa22.06■■□□□ 1.12
MCF2L2-211ENST00000482017 TSGA10IPQ3SY00 556 aa22.06■■□□□ 1.12
MCF2L2-211ENST00000482017 TMEM67Q5HYA8 995 aa22.06■■□□□ 1.12
MCF2L2-211ENST00000482017 SH3D19Q5HYK7 790 aa22.06■■□□□ 1.12
MCF2L2-211ENST00000482017 PPP4R3BQ5MIZ7 849 aa22.06■■□□□ 1.12
MCF2L2-211ENST00000482017 RASGRP2Q7LDG7 609 aa22.06■■□□□ 1.12
MCF2L2-211ENST00000482017 IFNL1Q8IU54 200 aa22.06■■□□□ 1.12
MCF2L2-211ENST00000482017 TMEM47Q9BQJ4 181 aa22.06■■□□□ 1.12
MCF2L2-211ENST00000482017 GPHNQ9NQX3 736 aaPredicted RBP22.06■■□□□ 1.12
MCF2L2-211ENST00000482017 VCAM1P19320 739 aa22.05■■□□□ 1.12
MCF2L2-211ENST00000482017 SART3Q15020 963 aaKnown RBP22.05■■□□□ 1.12
MCF2L2-211ENST00000482017 CCDC178Q5BJE1 867 aa22.05■■□□□ 1.12
MCF2L2-211ENST00000482017 IFIT1BQ5T764 474 aaKnown RBP22.05■■□□□ 1.12
MCF2L2-211ENST00000482017 RCSD1Q6JBY9 416 aa22.05■■□□□ 1.12
MCF2L2-211ENST00000482017 GPAT2Q6NUI2 795 aa22.05■■□□□ 1.12
MCF2L2-211ENST00000482017 BLOC1S2Q6QNY1 142 aa22.05■■□□□ 1.12
MCF2L2-211ENST00000482017 PROCA1Q8NCQ7 364 aaPredicted RBP22.05■■□□□ 1.12
MCF2L2-211ENST00000482017 NUP88Q99567 741 aaPredicted RBP22.05■■□□□ 1.12
MCF2L2-211ENST00000482017 BACH2Q9BYV9 841 aa22.05■■□□□ 1.12
MCF2L2-211ENST00000482017 UPF2Q9HAU5 1272 aaKnown RBP22.05■■□□□ 1.12
MCF2L2-211ENST00000482017 SENP2Q9HC62 589 aa22.05■■□□□ 1.12
MCF2L2-211ENST00000482017 TESPA1A2RU30 521 aaPredicted RBP22.04■■□□□ 1.12
MCF2L2-211ENST00000482017 PDHXO00330 501 aa22.04■■□□□ 1.12
MCF2L2-211ENST00000482017 NDUFB10O96000 172 aa22.04■■□□□ 1.12
MCF2L2-211ENST00000482017 TOP1P11387 765 aaKnown RBP22.04■■□□□ 1.12
MCF2L2-211ENST00000482017 PSMA5P28066 241 aa22.04■■□□□ 1.12
MCF2L2-211ENST00000482017 TM4SF4P48230 202 aa22.04■■□□□ 1.12
MCF2L2-211ENST00000482017 NT5C2P49902 561 aa22.04■■□□□ 1.12
MCF2L2-211ENST00000482017 WTAPQ15007 396 aa22.04■■□□□ 1.12
MCF2L2-211ENST00000482017 SLFN13Q68D06 897 aa22.04■■□□□ 1.12
MCF2L2-211ENST00000482017 RPAP3Q9H6T3 665 aaPredicted RBP22.04■■□□□ 1.12
MCF2L2-211ENST00000482017 KAT14Q9H8E8 782 aa22.04■■□□□ 1.12
MCF2L2-211ENST00000482017 AGTPBP1Q9UPW5 1226 aa22.04■■□□□ 1.12
MCF2L2-211ENST00000482017 F5H6K3 240 aa22.03■■□□□ 1.12
MCF2L2-211ENST00000482017 INHBEP58166 350 aa22.03■■□□□ 1.12
MCF2L2-211ENST00000482017 KLRC3Q07444 240 aa22.03■■□□□ 1.12
MCF2L2-211ENST00000482017 SEC23AQ15436 765 aa22.03■■□□□ 1.12
MCF2L2-211ENST00000482017 TAF1CQ15572 869 aaPredicted RBP22.03■■□□□ 1.12
MCF2L2-211ENST00000482017 FAM83BQ5T0W9 1011 aa22.03■■□□□ 1.12
MCF2L2-211ENST00000482017 OTUD7BQ6GQQ9 843 aa22.03■■□□□ 1.12
MCF2L2-211ENST00000482017 ANKRD23Q86SG2 305 aa22.03■■□□□ 1.12
MCF2L2-211ENST00000482017 C12orf42Q96LP6 360 aa22.03■■□□□ 1.12
MCF2L2-211ENST00000482017 C22orf23Q9BZE7 217 aa22.03■■□□□ 1.12
MCF2L2-211ENST00000482017 UPF3BQ9BZI7 483 aaKnown RBP22.03■■□□□ 1.12
MCF2L2-211ENST00000482017 TANGO6Q9C0B7 1094 aa22.03■■□□□ 1.12
MCF2L2-211ENST00000482017 PARP14Q460N5 1801 aa22.02■■□□□ 1.12
MCF2L2-211ENST00000482017 SH2B2O14492 632 aaPredicted RBP22.02■■□□□ 1.12
MCF2L2-211ENST00000482017 TRPA1O75762 1119 aa22.02■■□□□ 1.12
MCF2L2-211ENST00000482017 FGD1P98174 961 aa22.02■■□□□ 1.12
MCF2L2-211ENST00000482017 CCDC96Q2M329 555 aa22.02■■□□□ 1.12
MCF2L2-211ENST00000482017 NFXL1Q6ZNB6 911 aa22.02■■□□□ 1.12
MCF2L2-211ENST00000482017 DHX32Q7L7V1 743 aaKnown RBP22.02■■□□□ 1.12
MCF2L2-211ENST00000482017 DGKHQ86XP1 1220 aa22.02■■□□□ 1.12
MCF2L2-211ENST00000482017 MKL1Q969V6 931 aa22.02■■□□□ 1.12
MCF2L2-211ENST00000482017 IRX3P78415 501 aaPredicted RBP22.01■■□□□ 1.11
MCF2L2-211ENST00000482017 MAP2K1Q02750 393 aaPredicted RBP22.01■■□□□ 1.11
MCF2L2-211ENST00000482017 REM2Q8IYK8 340 aaPredicted RBP22.01■■□□□ 1.11
MCF2L2-211ENST00000482017 PNMA1Q8ND90 353 aa22.01■■□□□ 1.11
MCF2L2-211ENST00000482017 TTC14Q96N46 770 aa22.01■■□□□ 1.11
MCF2L2-211ENST00000482017 BEGAINQ9BUH8 593 aa22.01■■□□□ 1.11
MCF2L2-211ENST00000482017 LY9Q9HBG7 655 aa22.01■■□□□ 1.11
MCF2L2-211ENST00000482017 TSKSQ9UJT2 592 aa22.01■■□□□ 1.11
MCF2L2-211ENST00000482017 HMGB1P09429 215 aaKnown RBP22■■□□□ 1.11
MCF2L2-211ENST00000482017 CYP2C8P10632 490 aa22■■□□□ 1.11
MCF2L2-211ENST00000482017 RPS6KB1P23443 525 aa22■■□□□ 1.11
MCF2L2-211ENST00000482017 NOVP48745 357 aa22■■□□□ 1.11
MCF2L2-211ENST00000482017 EXOSC10Q01780 885 aaKnown RBP22■■□□□ 1.11
MCF2L2-211ENST00000482017 PABPC4Q13310 644 aaKnown RBP eCLIP22■■□□□ 1.11
MCF2L2-211ENST00000482017 RAB11FIP4Q86YS3 637 aa22■■□□□ 1.11
MCF2L2-211ENST00000482017 GMCL1P1Q8NEA9 526 aa22■■□□□ 1.11
MCF2L2-211ENST00000482017 IGDCC4Q8TDY8 1250 aa22■■□□□ 1.11
MCF2L2-211ENST00000482017 LPAR1Q92633 364 aa22■■□□□ 1.11
MCF2L2-211ENST00000482017 TMEM87BQ96K49 555 aa22■■□□□ 1.11
MCF2L2-211ENST00000482017 RNF186Q9NXI6 227 aa22■■□□□ 1.11
MCF2L2-211ENST00000482017 NAP1L2Q9ULW6 460 aaPredicted RBP22■■□□□ 1.11
MCF2L2-211ENST00000482017 FRMPD2Q68DX3 1309 aaPredicted RBP22■■□□□ 1.11
MCF2L2-211ENST00000482017 USP17L15C9J2P7 530 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 USP17L13C9JLJ4 530 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 USP17L11C9JVI0 530 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 USP17L18D6R9N7 530 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 USP17L22D6RA61 530 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 USP17L17D6RBQ6 530 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 USP17L19D6RCP7 530 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 USP17L20D6RJB6 530 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 WDR46O15213 610 aaKnown RBP21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 TBC1D8O95759 1140 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 OSBPP22059 807 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 SLC1A4P43007 532 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 ANAPC15P60006 121 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 USP17L24Q0WX57 530 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 IKQ13123 557 aaPredicted RBP21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 Q6ZUG5 572 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 KCTD1Q719H9 257 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 ASCC2Q9H1I8 757 aaPredicted RBP21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 GPCPD1Q9NPB8 672 aa21.99■■□□□ 1.11
MCF2L2-211ENST00000482017 CYP46A1Q9Y6A2 500 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms