RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 PIH1D3Q9NQM4 214 aaKnown RBP16.16■□□□□ 0.18
NR1H3-220ENST00000481020 LCMT1Q9UIC8 334 aa16.16■□□□□ 0.18
NR1H3-220ENST00000481020 EIF3CLB5ME19 914 aaKnown RBP16.15■□□□□ 0.18
NR1H3-220ENST00000481020 GTPBP6O43824 516 aaPredicted RBP16.15■□□□□ 0.18
NR1H3-220ENST00000481020 SHOX2O60902 331 aaPredicted RBP16.15■□□□□ 0.18
NR1H3-220ENST00000481020 IDH1O75874 414 aaKnown RBP16.15■□□□□ 0.18
NR1H3-220ENST00000481020 PDE8BO95263 885 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 NDUFA10O95299 355 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 MYL1P05976 194 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 RHOXF2BP0C7M4 288 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 PCP11498 1178 aaKnown RBP16.15■□□□□ 0.18
NR1H3-220ENST00000481020 CD44P16070 742 aaKnown RBP16.15■□□□□ 0.18
NR1H3-220ENST00000481020 COPB1P53618 953 aaKnown RBP16.15■□□□□ 0.18
NR1H3-220ENST00000481020 GYS2P54840 703 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 ERVK-24P63145 666 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 KRT31Q15323 416 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 PTPN21Q16825 1174 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 TSR1Q2NL82 804 aaKnown RBP16.15■□□□□ 0.18
NR1H3-220ENST00000481020 ICE2Q659A1 982 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 LRRC31Q6UY01 552 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 LDHAL6AQ6ZMR3 332 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 KIF6Q6ZMV9 814 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 RETREG2Q8NC44 543 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 OR8K1Q8NGG5 319 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 NOC3LQ8WTT2 800 aaKnown RBP16.15■□□□□ 0.18
NR1H3-220ENST00000481020 COG1Q8WTW3 980 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 EIF3CQ99613 913 aaKnown RBP16.15■□□□□ 0.18
NR1H3-220ENST00000481020 DNAJC7Q99615 494 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 RHOXF2Q9BQY4 288 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 FAM204AQ9H8W3 233 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 SENP2Q9HC62 589 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 RBM28Q9NW13 759 aaKnown RBP16.15■□□□□ 0.18
NR1H3-220ENST00000481020 EPN1Q9Y6I3 576 aaPredicted RBP16.15■□□□□ 0.18
NR1H3-220ENST00000481020 ARAP2Q8WZ64 1704 aa16.15■□□□□ 0.18
NR1H3-220ENST00000481020 PRPF6O94906 941 aaKnown RBP16.14■□□□□ 0.17
NR1H3-220ENST00000481020 CALM1P0DP23 149 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 CALM2P0DP24 149 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 CALM3P0DP25 149 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 PAK1Q13153 545 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 TCP11X2Q5H9J9 407 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 LPIN2Q92539 896 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 NUP88Q99567 741 aaPredicted RBP16.14■□□□□ 0.17
NR1H3-220ENST00000481020 PHF20Q9BVI0 1012 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 CABP5Q9NP86 173 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 KCNJ14Q9UNX9 436 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 SAR1BQ9Y6B6 198 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 LRP5O75197 1615 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 MROH5Q6ZUA9 1318 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 VGLL3A8MV65 326 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 TRIM66O15016 1216 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 PRPF3O43395 683 aaKnown RBP16.14■□□□□ 0.17
NR1H3-220ENST00000481020 RNF40O75150 1001 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 A1BGP04217 495 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 EEF1GP26641 437 aaKnown RBP16.14■□□□□ 0.17
NR1H3-220ENST00000481020 KRT9P35527 623 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 PUM3Q15397 648 aaKnown RBP16.14■□□□□ 0.17
NR1H3-220ENST00000481020 ZNF658Q5TYW1 1059 aaPredicted RBP16.14■□□□□ 0.17
NR1H3-220ENST00000481020 GRAMD1CQ8IYS0 662 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 CCDC170Q8IYT3 715 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 ZNF654Q8IZM8 581 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 TTLL11Q8NHH1 800 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 CPLX3Q8WVH0 158 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 SYMPKQ92797 1274 aaKnown RBP16.14■□□□□ 0.17
NR1H3-220ENST00000481020 CDC5LQ99459 802 aaKnown RBP16.14■□□□□ 0.17
NR1H3-220ENST00000481020 NUP58Q9BVL2 599 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 ANAPC4Q9UJX5 808 aa16.14■□□□□ 0.17
NR1H3-220ENST00000481020 A0A087WUV0 522 aaPredicted RBP16.13■□□□□ 0.17
NR1H3-220ENST00000481020 LRRIQ3A6PVS8 624 aaPredicted RBP16.13■□□□□ 0.17
NR1H3-220ENST00000481020 KRT86O43790 486 aa16.13■□□□□ 0.17
NR1H3-220ENST00000481020 GUCY1A2P33402 732 aa16.13■□□□□ 0.17
NR1H3-220ENST00000481020 ATP2C1P98194 919 aaPredicted RBP16.13■□□□□ 0.17
NR1H3-220ENST00000481020 SUGP1Q8IWZ8 645 aaKnown RBP16.13■□□□□ 0.17
NR1H3-220ENST00000481020 ACRBPQ8NEB7 543 aa16.13■□□□□ 0.17
NR1H3-220ENST00000481020 EPB41L4AQ9HCS5 686 aaPredicted RBP16.13■□□□□ 0.17
NR1H3-220ENST00000481020 DENND2AQ9ULE3 1009 aa16.13■□□□□ 0.17
NR1H3-220ENST00000481020 HPCAL4Q9UM19 191 aa16.13■□□□□ 0.17
NR1H3-220ENST00000481020 DOCK2Q92608 1830 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 KCNJ18B7U540 433 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 N4BP1O75113 896 aaKnown RBP16.12■□□□□ 0.17
NR1H3-220ENST00000481020 CTSWP56202 376 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 CDK17Q00537 523 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 PDE4CQ08493 712 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 NR5A1Q13285 461 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 STIM1Q13586 685 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 KCNJ12Q14500 433 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 E2F4Q16254 413 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 ARL6IP4Q66PJ3 421 aaKnown RBP16.12■□□□□ 0.17
NR1H3-220ENST00000481020 KLHL10Q6JEL2 608 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 PI16Q6UXB8 463 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 ZNF572Q7Z3I7 529 aaPredicted RBP16.12■□□□□ 0.17
NR1H3-220ENST00000481020 AMOTL1Q8IY63 956 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 FNBP4Q8N3X1 1017 aaPredicted RBP16.12■□□□□ 0.17
NR1H3-220ENST00000481020 UBAC1Q9BSL1 405 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 MYL10Q9BUA6 226 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 TSGA10Q9BZW7 698 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 SEC31BQ9NQW1 1179 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 CNNM1Q9NRU3 951 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 ZNHIT6Q9NWK9 470 aaKnown RBP16.12■□□□□ 0.17
NR1H3-220ENST00000481020 CAPN11Q9UMQ6 739 aa16.12■□□□□ 0.17
NR1H3-220ENST00000481020 ATXN2Q99700 1313 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms