RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ARID3AQ99856 593 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 BICC1Q9H694 974 aaKnown RBP6.1□□□□□ -1.43
PTCD3-213ENST00000480102 RRAGCQ9HB90 399 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 NDFIP2Q9NV92 336 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 ATXN7L1Q9ULK2 861 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-213ENST00000480102 SLX4Q8IY92 1834 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 LTBP1Q14766 1721 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 CACNA1FO60840 1977 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 FAM205AQ6ZU69 1335 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 ZNF541Q9H0D2 1346 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 A0A1W2PNR3 127 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 SERTM1A2A2V5 107 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 YDJCA8MPS7 323 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 EML1O00423 815 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 BNIP3LO60238 219 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 ECE2O60344 883 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 UFL1O94874 794 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 PDE8BO95263 885 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 GNAI2P04899 355 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 FGFR2P21802 821 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 IL15P40933 162 aaPredicted RBP6.09□□□□□ -1.43
PTCD3-213ENST00000480102 PTPN12Q05209 780 aaKnown RBP6.09□□□□□ -1.43
PTCD3-213ENST00000480102 DPYDQ12882 1025 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 EPHA10Q5JZY3 1008 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 LYPD4Q6UWN0 246 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 ZNF804AQ7Z570 1209 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 FBXO33Q7Z6M2 555 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 LPIN2Q92539 896 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 CCDC97Q96F63 343 aaPredicted RBP6.09□□□□□ -1.43
PTCD3-213ENST00000480102 ABHD17AQ96GS6 310 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 ZIC5Q96T25 663 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 ZCCHC2Q9C0B9 1178 aaKnown RBP6.09□□□□□ -1.43
PTCD3-213ENST00000480102 GPR108Q9NPR9 543 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 WWC3Q9ULE0 1092 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 ZNF232Q9UNY5 417 aa6.09□□□□□ -1.43
PTCD3-213ENST00000480102 DDX60Q8IY21 1712 aaKnown RBP6.08□□□□□ -1.44
PTCD3-213ENST00000480102 H7C1D1 291 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 EYA2O00167 538 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 ARHGEF15O94989 841 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 CELA2BP08218 269 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-213ENST00000480102 FGFR3P22607 806 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 MAP2K3P46734 347 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 HIRAP54198 1017 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-213ENST00000480102 FKBP1BP68106 108 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 PUM3Q15397 648 aaKnown RBP6.08□□□□□ -1.44
PTCD3-213ENST00000480102 DACT2Q5SW24 774 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 SH3PXD2AQ5TCZ1 1133 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 ANKMY2Q8IV38 441 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 RPAP2Q8IXW5 612 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-213ENST00000480102 DZIP1LQ8IYY4 767 aaKnown RBP6.08□□□□□ -1.44
PTCD3-213ENST00000480102 JMYQ8N9B5 988 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-213ENST00000480102 TDRD7Q8NHU6 1098 aaKnown RBP6.08□□□□□ -1.44
PTCD3-213ENST00000480102 SSH3Q8TE77 659 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 TBC1D22AQ8WUA7 517 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 ZBED3Q96IU2 234 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-213ENST00000480102 CD209Q9NNX6 404 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 NOP58Q9Y2X3 529 aaKnown RBP6.08□□□□□ -1.44
PTCD3-213ENST00000480102 CHMP3Q9Y3E7 222 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 PCDHGC4Q9Y5F7 938 aa6.08□□□□□ -1.44
PTCD3-213ENST00000480102 GPC6Q9Y625 555 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-213ENST00000480102 COL4A5P29400 1685 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 SALL1Q9NSC2 1324 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 RASSF10A6NK89 507 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 PSMD14O00487 310 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 ATXN7O15265 892 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-213ENST00000480102 BCAR3O75815 825 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 MAP4K4O95819 1239 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-213ENST00000480102 GMPSP49915 693 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-213ENST00000480102 MAP3K10Q02779 954 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 CAVIN4Q5BKX8 364 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 TAF7LQ5H9L4 462 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 SAMD5Q5TGI4 173 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 FKBP1CQ5VVH2 108 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 CDC37L1Q7L3B6 337 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 DNAJC5GQ8N7S2 189 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 ACDQ96AP0 544 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 ZNF512BQ96KM6 892 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-213ENST00000480102 FAM84BQ96KN1 310 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-213ENST00000480102 MEIS3Q99687 375 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 BCL2L13Q9BXK5 485 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 CNNM1Q9NRU3 951 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 RCAN3Q9UKA8 241 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 DDX19BQ9UMR2 479 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 AKAP2Q9Y2D5 859 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 PPP2R3BQ9Y5P8 575 aa6.07□□□□□ -1.44
PTCD3-213ENST00000480102 ADAMTSL1Q8N6G6 1762 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 DCDC2BA2VCK2 349 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 PPP1R12BO60237 982 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-213ENST00000480102 IFIT1P09914 478 aaKnown RBP6.06□□□□□ -1.44
PTCD3-213ENST00000480102 FAM157BP0CG42 384 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 RFX1P22670 979 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 HIBADHP31937 336 aaKnown RBP6.06□□□□□ -1.44
PTCD3-213ENST00000480102 EPS15P42566 896 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 KCNJ4P48050 445 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 HSP90AB4PQ58FF6 505 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 TTLL5Q6EMB2 1281 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 ATG9AQ7Z3C6 839 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 FTSJ3Q8IY81 847 aaKnown RBP6.06□□□□□ -1.44
PTCD3-213ENST00000480102 CNTROBQ8N137 903 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms