RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 ADAMTS8Q9UP79 889 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 TBX22Q9Y458 520 aa7.71□□□□□ -1.18
UPF3A-205ENST00000479712 SETD5Q9C0A6 1442 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 A2MP01023 1474 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 PZPP20742 1482 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 NCOA2Q15596 1464 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 A0A0A0MRY4 1105 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 KCNQ2O43526 872 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 HOXB4P17483 251 aaPredicted RBP7.7□□□□□ -1.18
UPF3A-205ENST00000479712 CASP7P55210 303 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 DDR2Q16832 855 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 LARP1BQ659C4 914 aaKnown RBP7.7□□□□□ -1.18
UPF3A-205ENST00000479712 RUFY4Q6ZNE9 571 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 BRINP3Q76B58 766 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 FBXO11Q86XK2 927 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 FMR1NBQ8N0W7 255 aaPredicted RBP7.7□□□□□ -1.18
UPF3A-205ENST00000479712 C19orf47Q8N9M1 422 aaKnown RBP7.7□□□□□ -1.18
UPF3A-205ENST00000479712 TMEM40Q8WWA1 233 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 DDX17Q92841 729 aaKnown RBP7.7□□□□□ -1.18
UPF3A-205ENST00000479712 TM9SF2Q99805 663 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 TNKS2Q9H2K2 1166 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 ST7Q9NRC1 585 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 PICK1Q9NRD5 415 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 SNTG2Q9NY99 539 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 GMIPQ9P107 970 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 PCDHGC5Q9Y5F6 944 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 NRKQ7Z2Y5 1582 aa7.7□□□□□ -1.18
UPF3A-205ENST00000479712 ARHGAP23Q9P227 1491 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 ABCC3O15438 1527 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 PLXNC1O60486 1568 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 GLI3P10071 1580 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 DLL1O00548 723 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 GRK4P32298 578 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 ID3Q02535 119 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 RASA3Q14644 834 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 FXNQ16595 210 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 EXOSC6Q5RKV6 272 aaKnown RBP7.69□□□□□ -1.18
UPF3A-205ENST00000479712 ZNF385CQ66K41 422 aaPredicted RBP7.69□□□□□ -1.18
UPF3A-205ENST00000479712 OVOS1Q6IE37 1185 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 SDE2Q6IQ49 451 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 JAZF1Q86VZ6 243 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 SVOPQ8N4V2 548 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 SLC26A8Q96RN1 970 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 RUSC1Q9BVN2 902 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 HIF3AQ9Y2N7 669 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 SYNGAP1Q96PV0 1343 aa7.69□□□□□ -1.18
UPF3A-205ENST00000479712 WISP1O95388 367 aa7.68□□□□□ -1.18
UPF3A-205ENST00000479712 PGRP06401 933 aa7.68□□□□□ -1.18
UPF3A-205ENST00000479712 GUCY2CP25092 1073 aa7.68□□□□□ -1.18
UPF3A-205ENST00000479712 ETF1P62495 437 aaKnown RBP7.68□□□□□ -1.18
UPF3A-205ENST00000479712 ERVK-24P63145 666 aa7.68□□□□□ -1.18
UPF3A-205ENST00000479712 AKAP4Q5JQC9 854 aa7.68□□□□□ -1.18
UPF3A-205ENST00000479712 LRP10Q7Z4F1 713 aa7.68□□□□□ -1.18
UPF3A-205ENST00000479712 TRIM11Q96F44 468 aa7.68□□□□□ -1.18
UPF3A-205ENST00000479712 KLHL3Q9UH77 587 aa7.68□□□□□ -1.18
UPF3A-205ENST00000479712 ADAM30Q9UKF2 790 aa7.68□□□□□ -1.18
UPF3A-205ENST00000479712 MAPK8IP1Q9UQF2 711 aa7.68□□□□□ -1.18
UPF3A-205ENST00000479712 MSRB2Q9Y3D2 182 aa7.68□□□□□ -1.18
UPF3A-205ENST00000479712 SPHKAPQ2M3C7 1700 aa7.68□□□□□ -1.18
UPF3A-205ENST00000479712 NKTRP30414 1462 aaKnown RBP7.68□□□□□ -1.18
UPF3A-205ENST00000479712 MYOM1P52179 1685 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 A0A1W2PQH9 124 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 FAM221BA6H8Z2 402 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 SPDYE3A6NKU9 549 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 SLC22A31A6NKX4 558 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 RNF225M0QZC1 329 aaPredicted RBP7.67□□□□□ -1.18
UPF3A-205ENST00000479712 TMPRSS2O15393 492 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 RING1Q06587 406 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 PPM1JQ5JR12 505 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 TMEM201Q5SNT2 666 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 ACAD11Q709F0 780 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 TTC6Q86TZ1 520 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 NLGN1Q8N2Q7 840 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 TAB3Q8N5C8 712 aaPredicted RBP7.67□□□□□ -1.18
UPF3A-205ENST00000479712 DNAJC5GQ8N7S2 189 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 TMPRSS13Q9BYE2 586 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 WNT10AQ9GZT5 417 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 CCDC113Q9H0I3 377 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 PPP1R9AQ9ULJ8 1098 aa7.67□□□□□ -1.18
UPF3A-205ENST00000479712 MRPL42Q9Y6G3 142 aaKnown RBP7.67□□□□□ -1.18
UPF3A-205ENST00000479712 FAM83GA6ND36 823 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 DNAJA2O60884 412 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 ZBTB37Q5TC79 503 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 NUTM2GQ5VZR2 741 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 NLRC3Q7RTR2 1065 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 LRRC59Q96AG4 307 aaKnown RBP7.66□□□□□ -1.18
UPF3A-205ENST00000479712 ATG4CQ96DT6 458 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 PLVAPQ9BX97 442 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 RNF208Q9H0X6 261 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 CYP4F12Q9HCS2 524 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 CRIM1Q9NZV1 1036 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 AP4E1Q9UPM8 1137 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 SLC12A7Q9Y666 1083 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 SAMD9LQ8IVG5 1584 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 UBR1Q8IWV7 1749 aa7.66□□□□□ -1.18
UPF3A-205ENST00000479712 MEGF11A6BM72 1044 aa7.65□□□□□ -1.18
UPF3A-205ENST00000479712 GNB5O14775 395 aa7.65□□□□□ -1.18
UPF3A-205ENST00000479712 FANCGO15287 622 aa7.65□□□□□ -1.18
UPF3A-205ENST00000479712 RGPD1P0DJD0 1748 aa7.65□□□□□ -1.18
UPF3A-205ENST00000479712 NME1P15531 152 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms