RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 STAG1Q8WVM7 1258 aa22.34■■□□□ 1.17
AGRN-208ENST00000479707 VCPKMTQ9H867 229 aa22.34■■□□□ 1.17
AGRN-208ENST00000479707 MTMR4Q9NYA4 1195 aa22.34■■□□□ 1.17
AGRN-208ENST00000479707 NYAP2Q9P242 653 aa22.34■■□□□ 1.17
AGRN-208ENST00000479707 LAMA4Q16363 1823 aa22.34■■□□□ 1.17
AGRN-208ENST00000479707 NMT2O60551 498 aa22.33■■□□□ 1.17
AGRN-208ENST00000479707 CDC45O75419 566 aa22.33■■□□□ 1.17
AGRN-208ENST00000479707 BCRP11274 1271 aa22.33■■□□□ 1.17
AGRN-208ENST00000479707 CAP1Q01518 475 aa22.33■■□□□ 1.17
AGRN-208ENST00000479707 CATSPERGQ6ZRH7 1159 aa22.33■■□□□ 1.17
AGRN-208ENST00000479707 KIAA1211Q6ZU35 1233 aa22.33■■□□□ 1.17
AGRN-208ENST00000479707 CTU1Q7Z7A3 348 aaKnown RBP22.33■■□□□ 1.17
AGRN-208ENST00000479707 NKX2-3Q8TAU0 364 aa22.33■■□□□ 1.17
AGRN-208ENST00000479707 ARHGAP39Q9C0H5 1083 aa22.33■■□□□ 1.17
AGRN-208ENST00000479707 RNF41Q9H4P4 317 aaPredicted RBP22.33■■□□□ 1.17
AGRN-208ENST00000479707 NEDD4P46934 1319 aa22.32■■□□□ 1.16
AGRN-208ENST00000479707 ZSWIM8A7E2V4 1837 aa22.32■■□□□ 1.16
AGRN-208ENST00000479707 PEX10O60683 326 aa22.32■■□□□ 1.16
AGRN-208ENST00000479707 TANGO6Q9C0B7 1094 aa22.32■■□□□ 1.16
AGRN-208ENST00000479707 GOPCQ9HD26 462 aa22.32■■□□□ 1.16
AGRN-208ENST00000479707 IL17RBQ9NRM6 502 aa22.32■■□□□ 1.16
AGRN-208ENST00000479707 TRIM17Q9Y577 477 aa22.32■■□□□ 1.16
AGRN-208ENST00000479707 PLIN4Q96Q06 1357 aa22.31■■□□□ 1.16
AGRN-208ENST00000479707 TTLL1O95922 423 aa22.31■■□□□ 1.16
AGRN-208ENST00000479707 HERVK_113P62684 666 aa22.31■■□□□ 1.16
AGRN-208ENST00000479707 LACTBP83111 547 aaPredicted RBP22.31■■□□□ 1.16
AGRN-208ENST00000479707 KIF22Q14807 665 aa22.31■■□□□ 1.16
AGRN-208ENST00000479707 SAMD1Q6SPF0 538 aaPredicted RBP22.31■■□□□ 1.16
AGRN-208ENST00000479707 CASC1Q6TDU7 716 aa22.31■■□□□ 1.16
AGRN-208ENST00000479707 LRRC47Q8N1G4 583 aaKnown RBP22.31■■□□□ 1.16
AGRN-208ENST00000479707 CHMP4CQ96CF2 233 aa22.31■■□□□ 1.16
AGRN-208ENST00000479707 MCOLN1Q9GZU1 580 aa22.31■■□□□ 1.16
AGRN-208ENST00000479707 U3KPZ7 1027 aaPredicted RBP22.31■■□□□ 1.16
AGRN-208ENST00000479707 GCLCP48506 637 aaPredicted RBP22.3■■□□□ 1.16
AGRN-208ENST00000479707 LPAR1Q92633 364 aa22.3■■□□□ 1.16
AGRN-208ENST00000479707 MAP4K1Q92918 833 aa22.3■■□□□ 1.16
AGRN-208ENST00000479707 EFCC1Q9HA90 598 aa22.3■■□□□ 1.16
AGRN-208ENST00000479707 ANO2Q9NQ90 1003 aa22.3■■□□□ 1.16
AGRN-208ENST00000479707 STX8Q9UNK0 236 aa22.3■■□□□ 1.16
AGRN-208ENST00000479707 B4E1Z4 1266 aa22.29■■□□□ 1.16
AGRN-208ENST00000479707 F5H6K3 240 aa22.29■■□□□ 1.16
AGRN-208ENST00000479707 PCP11498 1178 aaKnown RBP22.29■■□□□ 1.16
AGRN-208ENST00000479707 CTGFP29279 349 aa22.29■■□□□ 1.16
AGRN-208ENST00000479707 KLRC3Q07444 240 aa22.29■■□□□ 1.16
AGRN-208ENST00000479707 OTOP1Q7RTM1 612 aa22.29■■□□□ 1.16
AGRN-208ENST00000479707 MKL1Q969V6 931 aa22.29■■□□□ 1.16
AGRN-208ENST00000479707 NUP88Q99567 741 aaPredicted RBP22.29■■□□□ 1.16
AGRN-208ENST00000479707 PAGR1Q9BTK6 254 aa22.29■■□□□ 1.16
AGRN-208ENST00000479707 LSG1Q9H089 658 aaKnown RBP22.29■■□□□ 1.16
AGRN-208ENST00000479707 RBM8AQ9Y5S9 174 aaKnown RBP22.29■■□□□ 1.16
AGRN-208ENST00000479707 KDM4AO75164 1064 aa22.28■■□□□ 1.16
AGRN-208ENST00000479707 FMNL1O95466 1100 aaPredicted RBP22.28■■□□□ 1.16
AGRN-208ENST00000479707 CYP21A2P08686 494 aa22.28■■□□□ 1.16
AGRN-208ENST00000479707 PSMC4P43686 418 aa22.28■■□□□ 1.16
AGRN-208ENST00000479707 FAM83BQ5T0W9 1011 aa22.28■■□□□ 1.16
AGRN-208ENST00000479707 ESR2Q92731 530 aa22.28■■□□□ 1.16
AGRN-208ENST00000479707 ZKSCAN3Q9BRR0 538 aa22.28■■□□□ 1.16
AGRN-208ENST00000479707 TXNRD2Q9NNW7 524 aa22.28■■□□□ 1.16
AGRN-208ENST00000479707 WDR46O15213 610 aaKnown RBP22.27■■□□□ 1.16
AGRN-208ENST00000479707 FLOT1O75955 427 aa22.27■■□□□ 1.16
AGRN-208ENST00000479707 NDUFB10O96000 172 aa22.27■■□□□ 1.16
AGRN-208ENST00000479707 COG2Q14746 738 aa22.27■■□□□ 1.16
AGRN-208ENST00000479707 POTEEQ6S8J3 1075 aa22.27■■□□□ 1.16
AGRN-208ENST00000479707 RBPJLQ9UBG7 517 aa22.27■■□□□ 1.16
AGRN-208ENST00000479707 MTMR7Q9Y216 660 aa22.27■■□□□ 1.16
AGRN-208ENST00000479707 MGAMO43451 1857 aa22.26■■□□□ 1.15
AGRN-208ENST00000479707 ARHGEF6Q15052 776 aa22.26■■□□□ 1.15
AGRN-208ENST00000479707 FAM110CQ1W6H9 321 aa22.26■■□□□ 1.15
AGRN-208ENST00000479707 Q3C1V9 767 aa22.26■■□□□ 1.15
AGRN-208ENST00000479707 PPP4R3BQ5MIZ7 849 aa22.26■■□□□ 1.15
AGRN-208ENST00000479707 TRIM47Q96LD4 638 aa22.26■■□□□ 1.15
AGRN-208ENST00000479707 TAF6LQ9Y6J9 622 aa22.26■■□□□ 1.15
AGRN-208ENST00000479707 SPDYE16A6NNV3 312 aaPredicted RBP22.25■■□□□ 1.15
AGRN-208ENST00000479707 SLFN13Q68D06 897 aa22.25■■□□□ 1.15
AGRN-208ENST00000479707 GPRC5AQ8NFJ5 357 aa22.25■■□□□ 1.15
AGRN-208ENST00000479707 KRT23Q9C075 422 aa22.25■■□□□ 1.15
AGRN-208ENST00000479707 TCP11L1Q9NUJ3 509 aa22.25■■□□□ 1.15
AGRN-208ENST00000479707 FBXO28Q9NVF7 368 aa22.25■■□□□ 1.15
AGRN-208ENST00000479707 HOXC10Q9NYD6 342 aa22.25■■□□□ 1.15
AGRN-208ENST00000479707 ZSWIM5Q9P217 1185 aa22.25■■□□□ 1.15
AGRN-208ENST00000479707 ISY1Q9ULR0 285 aaKnown RBP22.25■■□□□ 1.15
AGRN-208ENST00000479707 DSG3P32926 999 aa22.24■■□□□ 1.15
AGRN-208ENST00000479707 FCGRTP55899 365 aa22.24■■□□□ 1.15
AGRN-208ENST00000479707 CNNM2Q9H8M5 875 aa22.24■■□□□ 1.15
AGRN-208ENST00000479707 MORF4L1Q9UBU8 362 aa22.24■■□□□ 1.15
AGRN-208ENST00000479707 RLFQ13129 1914 aa22.23■■□□□ 1.15
AGRN-208ENST00000479707 E7EWF7 191 aa22.23■■□□□ 1.15
AGRN-208ENST00000479707 CNMDO75829 334 aa22.23■■□□□ 1.15
AGRN-208ENST00000479707 MCCP23508 829 aa22.23■■□□□ 1.15
AGRN-208ENST00000479707 ERVK-9P63128 1117 aa22.23■■□□□ 1.15
AGRN-208ENST00000479707 ERVK-24P63145 666 aa22.23■■□□□ 1.15
AGRN-208ENST00000479707 TRDNQ13061 729 aa22.23■■□□□ 1.15
AGRN-208ENST00000479707 PKN2Q16513 984 aaKnown RBP22.23■■□□□ 1.15
AGRN-208ENST00000479707 GMCL1P1Q8NEA9 526 aa22.23■■□□□ 1.15
AGRN-208ENST00000479707 GTF3C2Q8WUA4 911 aaPredicted RBP22.23■■□□□ 1.15
AGRN-208ENST00000479707 ATG4CQ96DT6 458 aa22.23■■□□□ 1.15
AGRN-208ENST00000479707 TMEM47Q9BQJ4 181 aa22.23■■□□□ 1.15
AGRN-208ENST00000479707 BTBD7Q9P203 1132 aa22.23■■□□□ 1.15
AGRN-208ENST00000479707 PTPN22Q9Y2R2 807 aa22.23■■□□□ 1.15
AGRN-208ENST00000479707 TNPO2O14787 897 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms