RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 RBPJLQ9UBG7 517 aa9.88□□□□□ -0.83
HDAC6-221ENST00000477561 BIN2Q9UBW5 565 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-221ENST00000477561 A0A0D9SFI3 127 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 RAD21O60216 631 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 ELNP15502 786 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 RASA1P20936 1047 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 PDE4AP27815 886 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 GRK4P32298 578 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 NMIQ13287 307 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-221ENST00000477561 MTFR1Q15390 333 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 GPRC5AQ8NFJ5 357 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 COA7Q96BR5 231 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.87□□□□□ -0.83
HDAC6-221ENST00000477561 TMEM106CQ9BVX2 250 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 TANGO6Q9C0B7 1094 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 INCENPQ9NQS7 918 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 HELLSQ9NRZ9 838 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 MORF4L1Q9UBU8 362 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 TMX2Q9Y320 296 aa9.87□□□□□ -0.83
HDAC6-221ENST00000477561 FOXP2O15409 715 aa9.86□□□□□ -0.83
HDAC6-221ENST00000477561 ADCY3O60266 1144 aa9.86□□□□□ -0.83
HDAC6-221ENST00000477561 CNMDO75829 334 aa9.86□□□□□ -0.83
HDAC6-221ENST00000477561 EN2P19622 333 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-221ENST00000477561 ERVK-9P63128 1117 aa9.86□□□□□ -0.83
HDAC6-221ENST00000477561 ERVK-24P63145 666 aa9.86□□□□□ -0.83
HDAC6-221ENST00000477561 CTDSPL2Q05D32 466 aa9.86□□□□□ -0.83
HDAC6-221ENST00000477561 PPARAQ07869 468 aa9.86□□□□□ -0.83
HDAC6-221ENST00000477561 FAM47AQ5JRC9 791 aa9.86□□□□□ -0.83
HDAC6-221ENST00000477561 ZNF589Q86UQ0 364 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-221ENST00000477561 CCAR1Q8IX12 1150 aaKnown RBP9.86□□□□□ -0.83
HDAC6-221ENST00000477561 ZNF444Q8N0Y2 327 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-221ENST00000477561 PORCNQ9H237 461 aa9.86□□□□□ -0.83
HDAC6-221ENST00000477561 OSBPL3Q9H4L5 887 aa9.86□□□□□ -0.83
HDAC6-221ENST00000477561 VCPKMTQ9H867 229 aa9.86□□□□□ -0.83
HDAC6-221ENST00000477561 KANSL2Q9H9L4 492 aa9.86□□□□□ -0.83
HDAC6-221ENST00000477561 MGAMO43451 1857 aa9.85□□□□□ -0.83
HDAC6-221ENST00000477561 SPDYE16A6NNV3 312 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-221ENST00000477561 SDSP20132 328 aa9.85□□□□□ -0.83
HDAC6-221ENST00000477561 CYP2B6P20813 491 aa9.85□□□□□ -0.83
HDAC6-221ENST00000477561 COG2Q14746 738 aa9.85□□□□□ -0.83
HDAC6-221ENST00000477561 MCMDC2Q4G0Z9 681 aa9.85□□□□□ -0.83
HDAC6-221ENST00000477561 WDR78Q5VTH9 848 aa9.85□□□□□ -0.83
HDAC6-221ENST00000477561 SH2D4AQ9H788 454 aa9.85□□□□□ -0.83
HDAC6-221ENST00000477561 CWC22Q9HCG8 908 aaKnown RBP9.85□□□□□ -0.83
HDAC6-221ENST00000477561 BTBD7Q9P203 1132 aa9.85□□□□□ -0.83
HDAC6-221ENST00000477561 CLIP2Q9UDT6 1046 aa9.85□□□□□ -0.83
HDAC6-221ENST00000477561 GJD2Q9UKL4 321 aa9.85□□□□□ -0.83
HDAC6-221ENST00000477561 MYH8P13535 1937 aa9.85□□□□□ -0.83
HDAC6-221ENST00000477561 ROBO3Q96MS0 1386 aa9.85□□□□□ -0.83
HDAC6-221ENST00000477561 BRCA2P51587 3418 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 FLOT1O75955 427 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 SLC3A2P08195 630 aaKnown RBP9.84□□□□□ -0.83
HDAC6-221ENST00000477561 CCL5P13501 91 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 TFAP4Q01664 338 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 PDE4BQ07343 736 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 CWC27Q6UX04 472 aaKnown RBP9.84□□□□□ -0.83
HDAC6-221ENST00000477561 SLAIN1Q8ND83 568 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 GTF3C2Q8WUA4 911 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-221ENST00000477561 LPAR1Q92633 364 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 CHMP4CQ96CF2 233 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 ATG4CQ96DT6 458 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 NUP88Q99567 741 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-221ENST00000477561 ZNF287Q9HBT7 754 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 GOPCQ9HD26 462 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 FBXO28Q9NVF7 368 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 HOXC10Q9NYD6 342 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 RABGAP1Q9Y3P9 1069 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 TACC3Q9Y6A5 838 aa9.84□□□□□ -0.83
HDAC6-221ENST00000477561 IGKV6D-41A0A0C4DH26 115 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 WDR46O15213 610 aaKnown RBP9.83□□□□□ -0.84
HDAC6-221ENST00000477561 FGAP02671 866 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 INHAP05111 366 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 TSPY3P0CV98 308 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 TSPY8P0CW00 308 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 HSPD1P10809 573 aaKnown RBP9.83□□□□□ -0.84
HDAC6-221ENST00000477561 MAPK4P31152 587 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 DSG3P32926 999 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 HAND2P61296 217 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 UBXN2AP68543 259 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 TRIM32Q13049 653 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 IRF5Q13568 498 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 PLS1Q14651 629 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 FAM83BQ5T0W9 1011 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 GPR142Q7Z601 462 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 PLEKHH3Q7Z736 793 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 CEP95Q96GE4 821 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 NUDT12Q9BQG2 462 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 RNF208Q9H0X6 261 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 UNC93B1Q9H1C4 597 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 TOMM22Q9NS69 142 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 DIAPH3Q9NSV4 1193 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 NYAP2Q9P242 653 aa9.83□□□□□ -0.84
HDAC6-221ENST00000477561 TNRC18O15417 2968 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-221ENST00000477561 CCDC171Q6TFL3 1326 aa9.82□□□□□ -0.84
HDAC6-221ENST00000477561 F5H6K3 240 aa9.82□□□□□ -0.84
HDAC6-221ENST00000477561 RANBP6O60518 1105 aaKnown RBP9.82□□□□□ -0.84
HDAC6-221ENST00000477561 NMT2O60551 498 aa9.82□□□□□ -0.84
HDAC6-221ENST00000477561 GSPT1P15170 499 aaKnown RBP9.82□□□□□ -0.84
HDAC6-221ENST00000477561 CCNA1P78396 465 aa9.82□□□□□ -0.84
HDAC6-221ENST00000477561 KLRC3Q07444 240 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms