RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 KANSL2Q9H9L4 492 aa25.26■■□□□ 1.63
LIME1-204ENST00000476183 MKI67P46013 3256 aaKnown RBP25.25■■□□□ 1.63
LIME1-204ENST00000476183 ERVK-9P63128 1117 aa25.25■■□□□ 1.63
LIME1-204ENST00000476183 ERVK-24P63145 666 aa25.25■■□□□ 1.63
LIME1-204ENST00000476183 NMIQ13287 307 aaPredicted RBP25.25■■□□□ 1.63
LIME1-204ENST00000476183 TICAM2Q86XR7 235 aa25.25■■□□□ 1.63
LIME1-204ENST00000476183 VCPKMTQ9H867 229 aa25.25■■□□□ 1.63
LIME1-204ENST00000476183 RLFQ13129 1914 aa25.25■■□□□ 1.63
LIME1-204ENST00000476183 PLXNB2O15031 1838 aa25.24■■□□□ 1.63
LIME1-204ENST00000476183 SPDYE16A6NNV3 312 aaPredicted RBP25.24■■□□□ 1.63
LIME1-204ENST00000476183 ATP2B2Q01814 1243 aa25.24■■□□□ 1.63
LIME1-204ENST00000476183 PPARAQ07869 468 aa25.24■■□□□ 1.63
LIME1-204ENST00000476183 MTFR1Q15390 333 aa25.24■■□□□ 1.63
LIME1-204ENST00000476183 MCMDC2Q4G0Z9 681 aa25.24■■□□□ 1.63
LIME1-204ENST00000476183 ZNF589Q86UQ0 364 aaPredicted RBP25.24■■□□□ 1.63
LIME1-204ENST00000476183 SPICE1Q8N0Z3 855 aa25.24■■□□□ 1.63
LIME1-204ENST00000476183 PORCNQ9H237 461 aa25.24■■□□□ 1.63
LIME1-204ENST00000476183 GJD2Q9UKL4 321 aa25.24■■□□□ 1.63
LIME1-204ENST00000476183 ADCY3O60266 1144 aa25.23■■□□□ 1.63
LIME1-204ENST00000476183 IRF5Q13568 498 aa25.23■■□□□ 1.63
LIME1-204ENST00000476183 LBX2Q6XYB7 198 aa25.23■■□□□ 1.63
LIME1-204ENST00000476183 SLAIN1Q8ND83 568 aa25.23■■□□□ 1.63
LIME1-204ENST00000476183 LPAR1Q92633 364 aa25.23■■□□□ 1.63
LIME1-204ENST00000476183 SH2D4AQ9H788 454 aa25.23■■□□□ 1.63
LIME1-204ENST00000476183 RABGAP1Q9Y3P9 1069 aa25.23■■□□□ 1.63
LIME1-204ENST00000476183 IGKV6D-41A0A0C4DH26 115 aa25.22■■□□□ 1.63
LIME1-204ENST00000476183 ELNP15502 786 aa25.22■■□□□ 1.63
LIME1-204ENST00000476183 EN2P19622 333 aaPredicted RBP25.22■■□□□ 1.63
LIME1-204ENST00000476183 SDSP20132 328 aa25.22■■□□□ 1.63
LIME1-204ENST00000476183 TANGO6Q9C0B7 1094 aa25.22■■□□□ 1.63
LIME1-204ENST00000476183 BTBD7Q9P203 1132 aa25.22■■□□□ 1.63
LIME1-204ENST00000476183 PDE4DIPQ5VU43 2346 aa25.21■■□□□ 1.63
LIME1-204ENST00000476183 ZNF444Q8N0Y2 327 aaPredicted RBP25.21■■□□□ 1.63
LIME1-204ENST00000476183 TMEM106CQ9BVX2 250 aa25.21■■□□□ 1.63
LIME1-204ENST00000476183 TACC3Q9Y6A5 838 aa25.21■■□□□ 1.63
LIME1-204ENST00000476183 CTDSPL2Q05D32 466 aa25.2■■□□□ 1.62
LIME1-204ENST00000476183 COG2Q14746 738 aa25.2■■□□□ 1.62
LIME1-204ENST00000476183 ALX1Q15699 326 aa25.2■■□□□ 1.62
LIME1-204ENST00000476183 PXYLP1Q8TE99 480 aa25.2■■□□□ 1.62
LIME1-204ENST00000476183 ZNF287Q9HBT7 754 aa25.2■■□□□ 1.62
LIME1-204ENST00000476183 INCENPQ9NQS7 918 aa25.2■■□□□ 1.62
LIME1-204ENST00000476183 PARP14Q460N5 1801 aa25.19■■□□□ 1.62
LIME1-204ENST00000476183 WDR46O15213 610 aaKnown RBP25.19■■□□□ 1.62
LIME1-204ENST00000476183 MAPK4P31152 587 aa25.19■■□□□ 1.62
LIME1-204ENST00000476183 PDE4BQ07343 736 aa25.19■■□□□ 1.62
LIME1-204ENST00000476183 NYAP2Q9P242 653 aa25.19■■□□□ 1.62
LIME1-204ENST00000476183 BIN2Q9UBW5 565 aaPredicted RBP25.19■■□□□ 1.62
LIME1-204ENST00000476183 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.19■■□□□ 1.62
LIME1-204ENST00000476183 CCDC171Q6TFL3 1326 aa25.18■■□□□ 1.62
LIME1-204ENST00000476183 A0A0G2JMZ2 1700 aa25.18■■□□□ 1.62
LIME1-204ENST00000476183 SLC3A2P08195 630 aaKnown RBP25.18■■□□□ 1.62
LIME1-204ENST00000476183 HSPD1P10809 573 aaKnown RBP25.18■■□□□ 1.62
LIME1-204ENST00000476183 FAM47AQ5JRC9 791 aa25.18■■□□□ 1.62
LIME1-204ENST00000476183 GPR142Q7Z601 462 aa25.18■■□□□ 1.62
LIME1-204ENST00000476183 CEP95Q96GE4 821 aa25.18■■□□□ 1.62
LIME1-204ENST00000476183 HOXC10Q9NYD6 342 aa25.18■■□□□ 1.62
LIME1-204ENST00000476183 PLIN4Q96Q06 1357 aa25.18■■□□□ 1.62
LIME1-204ENST00000476183 MYH4Q9Y623 1939 aa25.18■■□□□ 1.62
LIME1-204ENST00000476183 FLOT1O75955 427 aa25.17■■□□□ 1.62
LIME1-204ENST00000476183 FGAP02671 866 aa25.17■■□□□ 1.62
LIME1-204ENST00000476183 INHAP05111 366 aa25.17■■□□□ 1.62
LIME1-204ENST00000476183 CCL5P13501 91 aa25.17■■□□□ 1.62
LIME1-204ENST00000476183 DSG3P32926 999 aa25.17■■□□□ 1.62
LIME1-204ENST00000476183 NEDD1Q8NHV4 660 aa25.17■■□□□ 1.62
LIME1-204ENST00000476183 GOPCQ9HD26 462 aa25.17■■□□□ 1.62
LIME1-204ENST00000476183 MTMR4Q9NYA4 1195 aa25.17■■□□□ 1.62
LIME1-204ENST00000476183 ANAPC4Q9UJX5 808 aa25.17■■□□□ 1.62
LIME1-204ENST00000476183 GSPT1P15170 499 aaKnown RBP25.16■■□□□ 1.62
LIME1-204ENST00000476183 UBXN2AP68543 259 aa25.16■■□□□ 1.62
LIME1-204ENST00000476183 TFAP4Q01664 338 aa25.16■■□□□ 1.62
LIME1-204ENST00000476183 PLEKHH3Q7Z736 793 aa25.16■■□□□ 1.62
LIME1-204ENST00000476183 ATG4CQ96DT6 458 aa25.16■■□□□ 1.62
LIME1-204ENST00000476183 CLIP2Q9UDT6 1046 aa25.16■■□□□ 1.62
LIME1-204ENST00000476183 RAD21O60216 631 aa25.15■■□□□ 1.62
LIME1-204ENST00000476183 TSPY3P0CV98 308 aa25.15■■□□□ 1.62
LIME1-204ENST00000476183 TSPY8P0CW00 308 aa25.15■■□□□ 1.62
LIME1-204ENST00000476183 CYP2B6P20813 491 aa25.15■■□□□ 1.62
LIME1-204ENST00000476183 CCNA1P78396 465 aa25.15■■□□□ 1.62
LIME1-204ENST00000476183 MORN1Q5T089 497 aa25.15■■□□□ 1.62
LIME1-204ENST00000476183 FAM83BQ5T0W9 1011 aa25.15■■□□□ 1.62
LIME1-204ENST00000476183 TTC22Q5TAA0 569 aa25.15■■□□□ 1.62
LIME1-204ENST00000476183 CWC27Q6UX04 472 aaKnown RBP25.15■■□□□ 1.62
LIME1-204ENST00000476183 CCAR1Q8IX12 1150 aaKnown RBP25.15■■□□□ 1.62
LIME1-204ENST00000476183 USP6NLQ92738 828 aa25.15■■□□□ 1.62
LIME1-204ENST00000476183 NUDT12Q9BQG2 462 aa25.15■■□□□ 1.62
LIME1-204ENST00000476183 UNC93B1Q9H1C4 597 aa25.15■■□□□ 1.62
LIME1-204ENST00000476183 FBXO28Q9NVF7 368 aa25.15■■□□□ 1.62
LIME1-204ENST00000476183 SOCS4Q8WXH5 440 aa25.14■■□□□ 1.62
LIME1-204ENST00000476183 MKL1Q969V6 931 aa25.14■■□□□ 1.62
LIME1-204ENST00000476183 NUP88Q99567 741 aaPredicted RBP25.14■■□□□ 1.62
LIME1-204ENST00000476183 RNF208Q9H0X6 261 aa25.14■■□□□ 1.62
LIME1-204ENST00000476183 ZMYM6O95789 1325 aa25.13■■□□□ 1.61
LIME1-204ENST00000476183 F5H6K3 240 aa25.13■■□□□ 1.61
LIME1-204ENST00000476183 NDUFB10O96000 172 aa25.13■■□□□ 1.61
LIME1-204ENST00000476183 KLRC3Q07444 240 aa25.13■■□□□ 1.61
LIME1-204ENST00000476183 SAMD1Q6SPF0 538 aaPredicted RBP25.13■■□□□ 1.61
LIME1-204ENST00000476183 SHISA4Q96DD7 197 aa25.13■■□□□ 1.61
LIME1-204ENST00000476183 MOV10L1Q9BXT6 1211 aaKnown RBP25.13■■□□□ 1.61
LIME1-204ENST00000476183 DIAPH3Q9NSV4 1193 aa25.13■■□□□ 1.61
LIME1-204ENST00000476183 TTLL1O95922 423 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms