RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 LMCD1Q9NZU5 365 aa7.99□□□□□ -1.13
PRKD3-208ENST00000475912 SLC22A31A6NKX4 558 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 WASH4PA8MWX3 477 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 BIN1O00499 593 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 LRRN2O75325 713 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 RECKO95980 971 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 MLECQ14165 292 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 ZNF394Q53GI3 561 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 GK5Q6ZS86 529 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 ATG4DQ86TL0 474 aaPredicted RBP7.98□□□□□ -1.13
PRKD3-208ENST00000475912 KIAA0825Q8IV33 1275 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 RNF141Q8WVD5 230 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 ASIC4Q96FT7 647 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 KREMEN1Q96MU8 473 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 PCDHGB7Q9Y5F8 929 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 CHD1O14646 1710 aa7.98□□□□□ -1.13
PRKD3-208ENST00000475912 ATE1O95260 518 aa7.97□□□□□ -1.13
PRKD3-208ENST00000475912 MCM4P33991 863 aa7.97□□□□□ -1.13
PRKD3-208ENST00000475912 CLCQ05315 142 aa7.97□□□□□ -1.13
PRKD3-208ENST00000475912 ARSHQ5FYA8 562 aa7.97□□□□□ -1.13
PRKD3-208ENST00000475912 OVOS1Q6IE37 1185 aa7.97□□□□□ -1.13
PRKD3-208ENST00000475912 USP48Q86UV5 1035 aa7.97□□□□□ -1.13
PRKD3-208ENST00000475912 DTWD2Q8NBA8 298 aa7.97□□□□□ -1.13
PRKD3-208ENST00000475912 NKD1Q969G9 470 aa7.97□□□□□ -1.13
PRKD3-208ENST00000475912 EAF1Q96JC9 268 aaPredicted RBP7.97□□□□□ -1.13
PRKD3-208ENST00000475912 SPON2Q9BUD6 331 aa7.97□□□□□ -1.13
PRKD3-208ENST00000475912 NT5C1AQ9BXI3 368 aa7.97□□□□□ -1.13
PRKD3-208ENST00000475912 DUSP15Q9H1R2 295 aaPredicted RBP7.97□□□□□ -1.13
PRKD3-208ENST00000475912 METTL5Q9NRN9 209 aaKnown RBP7.97□□□□□ -1.13
PRKD3-208ENST00000475912 GBP1P32455 592 aa7.96□□□□□ -1.14
PRKD3-208ENST00000475912 TXKP42681 527 aa7.96□□□□□ -1.14
PRKD3-208ENST00000475912 EHMT1Q9H9B1 1298 aa7.96□□□□□ -1.14
PRKD3-208ENST00000475912 GMIPQ9P107 970 aa7.96□□□□□ -1.14
PRKD3-208ENST00000475912 KCNH3Q9ULD8 1083 aa7.96□□□□□ -1.14
PRKD3-208ENST00000475912 RGS13O14921 159 aa7.95□□□□□ -1.14
PRKD3-208ENST00000475912 RAG1P15918 1043 aa7.95□□□□□ -1.14
PRKD3-208ENST00000475912 YBX3P16989 372 aaKnown RBP eCLIP7.95□□□□□ -1.147e-8■■■■■ 27.5
PRKD3-208ENST00000475912 TPP2P29144 1249 aaPredicted RBP7.95□□□□□ -1.14
PRKD3-208ENST00000475912 FLAD1Q8NFF5 587 aa7.95□□□□□ -1.14
PRKD3-208ENST00000475912 RNF34Q969K3 372 aa7.95□□□□□ -1.14
PRKD3-208ENST00000475912 CTNND2Q9UQB3 1225 aa7.95□□□□□ -1.14
PRKD3-208ENST00000475912 CARMIL2Q6F5E8 1435 aa7.95□□□□□ -1.14
PRKD3-208ENST00000475912 UBOX5O94941 541 aa7.94□□□□□ -1.14
PRKD3-208ENST00000475912 ESR1P03372 595 aa7.94□□□□□ -1.14
PRKD3-208ENST00000475912 POLR2BP30876 1174 aaKnown RBP7.94□□□□□ -1.14
PRKD3-208ENST00000475912 ZNF165P49910 485 aa7.94□□□□□ -1.14
PRKD3-208ENST00000475912 CHMP4BP1P59074 171 aa7.94□□□□□ -1.14
PRKD3-208ENST00000475912 TMPRSS7Q7RTY8 843 aa7.94□□□□□ -1.14
PRKD3-208ENST00000475912 CREG2Q8IUH2 290 aa7.94□□□□□ -1.14
PRKD3-208ENST00000475912 SLITRK4Q8IW52 837 aa7.94□□□□□ -1.14
PRKD3-208ENST00000475912 REXO1Q8N1G1 1221 aaKnown RBP7.94□□□□□ -1.14
PRKD3-208ENST00000475912 FAM168AQ92567 244 aa7.94□□□□□ -1.14
PRKD3-208ENST00000475912 ASPNQ9BXN1 380 aa7.94□□□□□ -1.14
PRKD3-208ENST00000475912 GPR62Q9BZJ7 368 aa7.94□□□□□ -1.14
PRKD3-208ENST00000475912 TRIT1Q9H3H1 467 aaKnown RBP7.94□□□□□ -1.14
PRKD3-208ENST00000475912 ANTXR1Q9H6X2 564 aa7.94□□□□□ -1.14
PRKD3-208ENST00000475912 AQRO60306 1485 aaKnown RBP eCLIP7.94□□□□□ -1.14
PRKD3-208ENST00000475912 SRFP11831 508 aa7.93□□□□□ -1.14
PRKD3-208ENST00000475912 VAMP1P23763 118 aa7.93□□□□□ -1.14
PRKD3-208ENST00000475912 GAB4Q2WGN9 574 aa7.93□□□□□ -1.14
PRKD3-208ENST00000475912 ATG4CQ96DT6 458 aa7.93□□□□□ -1.14
PRKD3-208ENST00000475912 GPATCH2Q9NW75 528 aa7.93□□□□□ -1.14
PRKD3-208ENST00000475912 SLAMF8Q9P0V8 285 aa7.93□□□□□ -1.14
PRKD3-208ENST00000475912 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.93□□□□□ -1.14
PRKD3-208ENST00000475912 TOPBP1Q92547 1522 aa7.93□□□□□ -1.14
PRKD3-208ENST00000475912 SCAMP3O14828 347 aaKnown RBP7.92□□□□□ -1.14
PRKD3-208ENST00000475912 RACK1P63244 317 aaKnown RBP7.92□□□□□ -1.14
PRKD3-208ENST00000475912 CDCP2Q5VXM1 449 aa7.92□□□□□ -1.14
PRKD3-208ENST00000475912 TSPYL5Q86VY4 417 aaPredicted RBP7.92□□□□□ -1.14
PRKD3-208ENST00000475912 VWCEQ96DN2 955 aa7.92□□□□□ -1.14
PRKD3-208ENST00000475912 MRRFQ96E11 262 aaKnown RBP7.92□□□□□ -1.14
PRKD3-208ENST00000475912 ALPK1Q96QP1 1244 aa7.92□□□□□ -1.14
PRKD3-208ENST00000475912 KRTAP4-7Q9BYR0 210 aa7.92□□□□□ -1.14
PRKD3-208ENST00000475912 CNNM2Q9H8M5 875 aa7.92□□□□□ -1.14
PRKD3-208ENST00000475912 C19orf73Q9NVV2 129 aa7.92□□□□□ -1.14
PRKD3-208ENST00000475912 DUSP13Q9UII6 198 aa7.92□□□□□ -1.14
PRKD3-208ENST00000475912 SHISA3A0PJX4 238 aa7.91□□□□□ -1.14
PRKD3-208ENST00000475912 NLRC3Q7RTR2 1065 aa7.91□□□□□ -1.14
PRKD3-208ENST00000475912 TMEM40Q8WWA1 233 aa7.91□□□□□ -1.14
PRKD3-208ENST00000475912 DDX41Q9UJV9 622 aaKnown RBP7.91□□□□□ -1.14
PRKD3-208ENST00000475912 CLASP1Q7Z460 1538 aa7.91□□□□□ -1.14
PRKD3-208ENST00000475912 DNAJC25-GNG10A0A024R161 153 aa7.9□□□□□ -1.14
PRKD3-208ENST00000475912 UNCXA6NJT0 531 aa7.9□□□□□ -1.14
PRKD3-208ENST00000475912 RALGPS1Q5JS13 557 aa7.9□□□□□ -1.14
PRKD3-208ENST00000475912 LCE1DQ5T752 114 aa7.9□□□□□ -1.14
PRKD3-208ENST00000475912 FYB2Q5VWT5 728 aa7.9□□□□□ -1.14
PRKD3-208ENST00000475912 OGFOD2Q6N063 350 aa7.9□□□□□ -1.14
PRKD3-208ENST00000475912 RGS22Q8NE09 1264 aa7.9□□□□□ -1.14
PRKD3-208ENST00000475912 TARBP1Q13395 1621 aaKnown RBP7.89□□□□□ -1.15
PRKD3-208ENST00000475912 MEIS3P2A8K0S8 358 aa7.89□□□□□ -1.15
PRKD3-208ENST00000475912 NME1P15531 152 aaKnown RBP7.89□□□□□ -1.15
PRKD3-208ENST00000475912 GDNFP39905 211 aa7.89□□□□□ -1.15
PRKD3-208ENST00000475912 RNF4P78317 190 aa7.89□□□□□ -1.15
PRKD3-208ENST00000475912 EGR3Q06889 387 aa7.89□□□□□ -1.15
PRKD3-208ENST00000475912 METTL16Q86W50 562 aaKnown RBP7.89□□□□□ -1.15
PRKD3-208ENST00000475912 ZSWIM9Q86XI8 627 aa7.89□□□□□ -1.15
PRKD3-208ENST00000475912 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.89□□□□□ -1.15
PRKD3-208ENST00000475912 KIAA1522Q9P206 1035 aaPredicted RBP7.89□□□□□ -1.15
PRKD3-208ENST00000475912 PCDHA11Q9Y5I1 949 aa7.89□□□□□ -1.15
PRKD3-208ENST00000475912 LTKP29376 864 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 780.5 ms