RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 USP5P45974 858 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 EVX2Q03828 476 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 LONRF3Q496Y0 759 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 RESP18Q5W5W9 173 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 PTF1AQ7RTS3 328 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 HDXQ7Z353 690 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 ANKRD18AQ8IVF6 992 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 ZNF654Q8IZM8 581 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 CCDC24Q8N4L8 307 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 OXER1Q8TDS5 423 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 CELF1Q92879 486 aaKnown RBP14.74□□□□□ -0.05
CCNL1-216ENST00000475298 SUGCTQ9HAC7 445 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 L1RE1Q9UN81 338 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 BAZ2AQ9UIF9 1905 aaKnown RBP14.74□□□□□ -0.05
CCNL1-216ENST00000475298 ZNF804BA4D1E1 1349 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 hCG_1642624A0A1W2PR95 340 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 ERICH2A1L162 156 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 PPFIA4O75335 1185 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 PRDM1O75626 825 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 ATP1A3P13637 1013 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 METTL16Q86W50 562 aaKnown RBP14.74□□□□□ -0.05
CCNL1-216ENST00000475298 TMEM139Q8IV31 216 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 JMYQ8N9B5 988 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 CNNM3Q8NE01 707 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 ZNF384Q8TF68 577 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 DHX58Q96C10 678 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 PPP2R2CQ9Y2T4 447 aa14.74□□□□□ -0.05
CCNL1-216ENST00000475298 TNKSO95271 1327 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 GNG11P61952 73 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 SATB1Q01826 763 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 GOLGA8FQ08AF8 430 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 GOLGA8DPQ0D2H9 430 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 TRIM22Q8IYM9 498 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 CNPY4Q8N129 248 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 MICALL1Q8N3F8 863 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 CRACR2BQ8N4Y2 399 aaPredicted RBP14.73□□□□□ -0.05
CCNL1-216ENST00000475298 SHISA4Q96DD7 197 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 UBAC1Q9BSL1 405 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 BCCIPQ9P287 314 aaKnown RBP eCLIP14.73□□□□□ -0.05
CCNL1-216ENST00000475298 RAB21Q9UL25 225 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 ZNF652Q9Y2D9 606 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 MYH2Q9UKX2 1941 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 WWC2Q6AWC2 1192 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 KCNV1Q6PIU1 500 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 FCHSD1Q86WN1 690 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 FOXP4Q8IVH2 680 aaPredicted RBP14.73□□□□□ -0.05
CCNL1-216ENST00000475298 FANCBQ8NB91 859 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 PNKPQ96T60 521 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 RIOK1Q9BRS2 568 aaKnown RBP14.73□□□□□ -0.05
CCNL1-216ENST00000475298 HSD3B7Q9H2F3 369 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 MINPP1Q9UNW1 487 aa14.73□□□□□ -0.05
CCNL1-216ENST00000475298 PTPN21Q16825 1174 aa14.72□□□□□ -0.05
CCNL1-216ENST00000475298 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.72□□□□□ -0.05
CCNL1-216ENST00000475298 TUBE1Q9UJT0 475 aa14.72□□□□□ -0.05
CCNL1-216ENST00000475298 KCNH3Q9ULD8 1083 aa14.72□□□□□ -0.05
CCNL1-216ENST00000475298 PCDHB6Q9Y5E3 794 aa14.72□□□□□ -0.05
CCNL1-216ENST00000475298 NID2Q14112 1375 aa14.72□□□□□ -0.05
CCNL1-216ENST00000475298 A0A1B0GUL6 1792 aa14.72□□□□□ -0.05
CCNL1-216ENST00000475298 CASZ1Q86V15 1759 aa14.72□□□□□ -0.05
CCNL1-216ENST00000475298 CACNA1SQ13698 1873 aa14.72□□□□□ -0.05
CCNL1-216ENST00000475298 CCDC196A0A1B0GTZ2 297 aa14.71□□□□□ -0.05
CCNL1-216ENST00000475298 FAM205CA6NFA0 338 aa14.71□□□□□ -0.05
CCNL1-216ENST00000475298 ZSCAN12O43309 604 aa14.71□□□□□ -0.05
CCNL1-216ENST00000475298 CUTAO60888 179 aa14.71□□□□□ -0.05
CCNL1-216ENST00000475298 FANCCQ00597 558 aa14.71□□□□□ -0.05
CCNL1-216ENST00000475298 FAM98CQ17RN3 349 aaKnown RBP14.71□□□□□ -0.05
CCNL1-216ENST00000475298 TBC1D9BQ66K14 1250 aa14.71□□□□□ -0.05
CCNL1-216ENST00000475298 KRI1Q8N9T8 703 aaKnown RBP14.71□□□□□ -0.05
CCNL1-216ENST00000475298 FAM212AQ96EL1 285 aa14.71□□□□□ -0.05
CCNL1-216ENST00000475298 FAM84BQ96KN1 310 aaPredicted RBP14.71□□□□□ -0.05
CCNL1-216ENST00000475298 RNF41Q9H4P4 317 aaPredicted RBP14.71□□□□□ -0.05
CCNL1-216ENST00000475298 HNRNPH1P31943 449 aaKnown RBP14.71□□□□□ -0.05
CCNL1-216ENST00000475298 SAFBQ15424 915 aaKnown RBP eCLIP14.71□□□□□ -0.05
CCNL1-216ENST00000475298 SEC23AQ15436 765 aa14.71□□□□□ -0.05
CCNL1-216ENST00000475298 WASF1Q92558 559 aa14.71□□□□□ -0.05
CCNL1-216ENST00000475298 DPF2Q92785 391 aa14.71□□□□□ -0.05
CCNL1-216ENST00000475298 ABCB6Q9NP58 842 aa14.71□□□□□ -0.05
CCNL1-216ENST00000475298 COL5A3P25940 1745 aaPredicted RBP14.71□□□□□ -0.05
CCNL1-216ENST00000475298 FAM237AA0A1B0GTK4 181 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 EIF3JO75822 258 aaKnown RBP14.7□□□□□ -0.06
CCNL1-216ENST00000475298 DEXIO95424 95 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 ENAHQ8N8S7 591 aaPredicted RBP14.7□□□□□ -0.06
CCNL1-216ENST00000475298 MSANTD4Q8NCY6 345 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 FAM71BQ8TC56 605 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 ZSWIM4Q9H7M6 989 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 GNL3LQ9NVN8 582 aaKnown RBP14.7□□□□□ -0.06
CCNL1-216ENST00000475298 BSDC1Q9NW68 430 aaPredicted RBP14.7□□□□□ -0.06
CCNL1-216ENST00000475298 SRP68Q9UHB9 627 aaKnown RBP14.7□□□□□ -0.06
CCNL1-216ENST00000475298 JAG2Q9Y219 1238 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 PCDHA5Q9Y5H7 936 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 PHACTR2O75167 634 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 BMP6P22004 513 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 UBE4AQ14139 1066 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 SF3B3Q15393 1217 aaKnown RBP14.7□□□□□ -0.06
CCNL1-216ENST00000475298 CAVIN4Q5BKX8 364 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 SLC51AQ86UW1 340 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 GRAMD1CQ8IYS0 662 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 ESR2Q92731 530 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 CABP5Q9NP86 173 aa14.7□□□□□ -0.06
CCNL1-216ENST00000475298 TFCP2L1Q9NZI6 479 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms