RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 CLIP2Q9UDT6 1046 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 CPA4Q9UI42 421 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 PLIN4Q96Q06 1357 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 LAMA4Q16363 1823 aa11.25□□□□□ -0.61
APTX-219ENST00000474658 CASP8AP2Q9UKL3 1982 aa11.25□□□□□ -0.61
APTX-219ENST00000474658 NMT2O60551 498 aa11.25□□□□□ -0.61
APTX-219ENST00000474658 PCP11498 1178 aaKnown RBP11.25□□□□□ -0.61
APTX-219ENST00000474658 HOXA7P31268 230 aaPredicted RBP11.25□□□□□ -0.61
APTX-219ENST00000474658 SP3Q02447 781 aa11.25□□□□□ -0.61
APTX-219ENST00000474658 CASC1Q6TDU7 716 aa11.25□□□□□ -0.61
APTX-219ENST00000474658 C17orf99Q6UX52 265 aa11.25□□□□□ -0.61
APTX-219ENST00000474658 KIAA1211Q6ZU35 1233 aa11.25□□□□□ -0.61
APTX-219ENST00000474658 P2RX7Q99572 595 aaKnown RBP11.25□□□□□ -0.61
APTX-219ENST00000474658 LSG1Q9H089 658 aaKnown RBP11.25□□□□□ -0.61
APTX-219ENST00000474658 ASCC2Q9H1I8 757 aaPredicted RBP11.25□□□□□ -0.61
APTX-219ENST00000474658 RNF41Q9H4P4 317 aaPredicted RBP11.25□□□□□ -0.61
APTX-219ENST00000474658 IL17RBQ9NRM6 502 aa11.25□□□□□ -0.61
APTX-219ENST00000474658 MTMR4Q9NYA4 1195 aa11.25□□□□□ -0.61
APTX-219ENST00000474658 PNMA3Q9UL41 463 aa11.25□□□□□ -0.61
APTX-219ENST00000474658 NEDD4P46934 1319 aa11.25□□□□□ -0.61
APTX-219ENST00000474658 ADGRA2Q96PE1 1338 aa11.25□□□□□ -0.61
APTX-219ENST00000474658 USP17L15C9J2P7 530 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 USP17L13C9JLJ4 530 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 USP17L11C9JVI0 530 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 USP17L18D6R9N7 530 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 USP17L22D6RA61 530 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 USP17L17D6RBQ6 530 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 USP17L19D6RCP7 530 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 USP17L20D6RJB6 530 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 TTLL1O95922 423 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 CYP21A2P08686 494 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 VCAM1P19320 739 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 IRX3P78415 501 aaPredicted RBP11.24□□□□□ -0.61
APTX-219ENST00000474658 USP17L24Q0WX57 530 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 CATSPERGQ6ZRH7 1159 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 SPICE1Q8N0Z3 855 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 SMCR8Q8TEV9 937 aaPredicted RBP11.24□□□□□ -0.61
APTX-219ENST00000474658 MKL1Q969V6 931 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 RPAP3Q9H6T3 665 aaPredicted RBP11.24□□□□□ -0.61
APTX-219ENST00000474658 VCPKMTQ9H867 229 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 ANO2Q9NQ90 1003 aa11.24□□□□□ -0.61
APTX-219ENST00000474658 RBM8AQ9Y5S9 174 aaKnown RBP11.24□□□□□ -0.61
APTX-219ENST00000474658 B4E1Z4 1266 aa11.23□□□□□ -0.61
APTX-219ENST00000474658 RAD21O60216 631 aa11.23□□□□□ -0.61
APTX-219ENST00000474658 BCRP11274 1271 aa11.23□□□□□ -0.61
APTX-219ENST00000474658 LRRC47Q8N1G4 583 aaKnown RBP11.23□□□□□ -0.61
APTX-219ENST00000474658 CD99L2Q8TCZ2 262 aa11.23□□□□□ -0.61
APTX-219ENST00000474658 LPAR1Q92633 364 aa11.23□□□□□ -0.61
APTX-219ENST00000474658 ESR2Q92731 530 aa11.23□□□□□ -0.61
APTX-219ENST00000474658 GOPCQ9HD26 462 aa11.23□□□□□ -0.61
APTX-219ENST00000474658 TAF6LQ9Y6J9 622 aa11.23□□□□□ -0.61
APTX-219ENST00000474658 F5H6K3 240 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 KDM4AO75164 1064 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
APTX-219ENST00000474658 NDUFB10O96000 172 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 GCLCP48506 637 aaPredicted RBP11.22□□□□□ -0.61
APTX-219ENST00000474658 NOVP48745 357 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 HERVK_113P62684 666 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 CAP1Q01518 475 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 KLRC3Q07444 240 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 PPP4R3BQ5MIZ7 849 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 POTEEQ6S8J3 1075 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 ANKRD13CQ8N6S4 541 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 ERO1AQ96HE7 468 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 ZKSCAN3Q9BRR0 538 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 KRT23Q9C075 422 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 TANGO6Q9C0B7 1094 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 CNNM2Q9H8M5 875 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 TCP11L1Q9NUJ3 509 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 ZSWIM5Q9P217 1185 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 STX8Q9UNK0 236 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 MYH4Q9Y623 1939 aa11.22□□□□□ -0.61
APTX-219ENST00000474658 E7EWF7 191 aa11.21□□□□□ -0.61
APTX-219ENST00000474658 WDR46O15213 610 aaKnown RBP11.21□□□□□ -0.61
APTX-219ENST00000474658 PEX10O60683 326 aa11.21□□□□□ -0.61
APTX-219ENST00000474658 LACTBP83111 547 aaPredicted RBP11.21□□□□□ -0.61
APTX-219ENST00000474658 COG2Q14746 738 aa11.21□□□□□ -0.61
APTX-219ENST00000474658 NECTIN1Q15223 517 aa11.21□□□□□ -0.61
APTX-219ENST00000474658 FAM83BQ5T0W9 1011 aa11.21□□□□□ -0.61
APTX-219ENST00000474658 SLFN13Q68D06 897 aa11.21□□□□□ -0.61
APTX-219ENST00000474658 STOX1Q6ZVD7 989 aa11.21□□□□□ -0.61
APTX-219ENST00000474658 CHMP4CQ96CF2 233 aa11.21□□□□□ -0.61
APTX-219ENST00000474658 NUP88Q99567 741 aaPredicted RBP11.21□□□□□ -0.61
APTX-219ENST00000474658 ARHGAP39Q9C0H5 1083 aa11.21□□□□□ -0.61
APTX-219ENST00000474658 RBPJLQ9UBG7 517 aa11.21□□□□□ -0.61
APTX-219ENST00000474658 SYNPO2Q9UMS6 1093 aa11.21□□□□□ -0.61
APTX-219ENST00000474658 SLC27A2O14975 620 aa11.2□□□□□ -0.62
APTX-219ENST00000474658 FLOT1O75955 427 aa11.2□□□□□ -0.62
APTX-219ENST00000474658 CTGFP29279 349 aa11.2□□□□□ -0.62
APTX-219ENST00000474658 PSMC4P43686 418 aa11.2□□□□□ -0.62
APTX-219ENST00000474658 NT5C2P49902 561 aa11.2□□□□□ -0.62
APTX-219ENST00000474658 TRDNQ13061 729 aa11.2□□□□□ -0.62
APTX-219ENST00000474658 KIF22Q14807 665 aa11.2□□□□□ -0.62
APTX-219ENST00000474658 Q3C1V9 767 aa11.2□□□□□ -0.62
APTX-219ENST00000474658 CREB3L3Q68CJ9 461 aa11.2□□□□□ -0.62
APTX-219ENST00000474658 RCSD1Q6JBY9 416 aa11.2□□□□□ -0.62
APTX-219ENST00000474658 CYB5R4Q7L1T6 521 aa11.2□□□□□ -0.62
APTX-219ENST00000474658 CTU1Q7Z7A3 348 aaKnown RBP11.2□□□□□ -0.62
APTX-219ENST00000474658 IQCA1Q86XH1 822 aa11.2□□□□□ -0.62
APTX-219ENST00000474658 GMCL1P1Q8NEA9 526 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms