RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 OTUD5Q96G74 571 aa11.55□□□□□ -0.56
APTX-216ENST00000472896 CARD6Q9BX69 1037 aa11.55□□□□□ -0.56
APTX-216ENST00000472896 GREM2Q9H772 168 aa11.55□□□□□ -0.56
APTX-216ENST00000472896 SSC5DA1L4H1 1573 aa11.55□□□□□ -0.56
APTX-216ENST00000472896 URI1O94763 535 aaPredicted RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 CTSWP56202 376 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 GSCP56915 257 aaPredicted RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 GTF2IP78347 998 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 SP3Q02447 781 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 ARMCX5Q6P1M9 558 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 TRIM65Q6PJ69 517 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 FERMT3Q86UX7 667 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 PACS2Q86VP3 889 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 SSH3Q8TE77 659 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 GOLGA1Q92805 767 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 ZBTB9Q96C00 473 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 CDC5LQ99459 802 aaKnown RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 LARP6Q9BRS8 491 aaKnown RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 METTL22Q9BUU2 404 aaPredicted RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 TFIP11Q9UBB9 837 aaKnown RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 TPCN1Q9ULQ1 816 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 MYO3BQ8WXR4 1341 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 RBBP6Q7Z6E9 1792 aaKnown RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 PNMA6EA0A0J9YXQ4 647 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 EIF3CLB5ME19 914 aaKnown RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 H0YGN5 161 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 KINO60870 393 aaKnown RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 USP2O75604 605 aaPredicted RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 CCDC172P0C7W6 258 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 ZBTB48P10074 688 aaPredicted RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 MAP3K9P80192 1104 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 NECTIN1Q15223 517 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 HSP90AB4PQ58FF6 505 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 GORABQ5T7V8 394 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 NBPF12Q5TAG4 269 aaPredicted RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 SLC4A10Q6U841 1118 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 MMS22LQ6ZRQ5 1243 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 CERS5Q8N5B7 392 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 ZNF333Q96JL9 665 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 EIF3CQ99613 913 aaKnown RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 TMX1Q9H3N1 280 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 ZCCHC17Q9NP64 241 aaKnown RBP11.54□□□□□ -0.56
APTX-216ENST00000472896 RCOR1Q9UKL0 485 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 CEP83Q9Y592 693 aa11.54□□□□□ -0.56
APTX-216ENST00000472896 TESPA1A2RU30 521 aaPredicted RBP11.53□□□□□ -0.56
APTX-216ENST00000472896 HIP1O00291 1037 aa11.53□□□□□ -0.56
APTX-216ENST00000472896 GLRX3O76003 335 aaKnown RBP11.53□□□□□ -0.56
APTX-216ENST00000472896 IGKV5-2P06315 115 aa11.53□□□□□ -0.56
APTX-216ENST00000472896 DLGAP5Q15398 846 aa11.53□□□□□ -0.56
APTX-216ENST00000472896 HDXQ7Z353 690 aa11.53□□□□□ -0.56
APTX-216ENST00000472896 TMC6Q7Z403 805 aa11.53□□□□□ -0.56
APTX-216ENST00000472896 CCAR1Q8IX12 1150 aaKnown RBP11.53□□□□□ -0.56
APTX-216ENST00000472896 AOPEPQ8N6M6 819 aa11.53□□□□□ -0.56
APTX-216ENST00000472896 NECAB1Q8N987 351 aa11.53□□□□□ -0.56
APTX-216ENST00000472896 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
APTX-216ENST00000472896 LEMD3Q9Y2U8 911 aa11.53□□□□□ -0.56
APTX-216ENST00000472896 A0A087WUV0 522 aaPredicted RBP11.52□□□□□ -0.57
APTX-216ENST00000472896 CLRN2A0PK11 232 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 SNAP23O00161 211 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 SRGAP3O43295 1099 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 CBFA2T2O43439 604 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 MYO1BO43795 1136 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 PPP1R12BO60237 982 aaPredicted RBP11.52□□□□□ -0.57
APTX-216ENST00000472896 ERLIN1O75477 346 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 MYCP01106 439 aaPredicted RBP11.52□□□□□ -0.57
APTX-216ENST00000472896 TUBBP07437 444 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 CPA1P15085 419 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 TXLNAP40222 546 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 USP8P40818 1118 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 FAM160A1Q05DH4 1040 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 TUBB2AQ13885 445 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 POLA2Q14181 598 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 LONRF2Q1L5Z9 754 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 ADCK5Q3MIX3 580 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 FAM173BQ6P4H8 233 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 DDX11Q96FC9 970 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 PRMT6Q96LA8 375 aaPredicted RBP11.52□□□□□ -0.57
APTX-216ENST00000472896 DRC1Q96MC2 740 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 TUBB2BQ9BVA1 445 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 PARD6BQ9BYG5 372 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 ACBD3Q9H3P7 528 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 PTCH2Q9Y6C5 1203 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 ZNF804BA4D1E1 1349 aa11.52□□□□□ -0.57
APTX-216ENST00000472896 CCDC196A0A1B0GTZ2 297 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 USP5P45974 858 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 PPP2R3AQ06190 1150 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 APOBRQ0VD83 1088 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 TSGA10IPQ3SY00 556 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 CWC27Q6UX04 472 aaKnown RBP11.51□□□□□ -0.57
APTX-216ENST00000472896 RHPN1Q8TCX5 695 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 CCDC34Q96HJ3 373 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 MS4A4AQ96JQ5 239 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 ZNF396Q96N95 335 aaPredicted RBP11.51□□□□□ -0.57
APTX-216ENST00000472896 TACO1Q9BSH4 297 aaKnown RBP11.51□□□□□ -0.57
APTX-216ENST00000472896 STK31Q9BXU1 1019 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 CD209Q9NNX6 404 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 SNRKQ9NRH2 765 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 DONSONQ9NYP3 566 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 MAP3K2Q9Y2U5 619 aa11.51□□□□□ -0.57
APTX-216ENST00000472896 MRFAP1Q9Y605 127 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms