RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 SEC62Q99442 399 aaKnown RBP25.09■■□□□ 1.61
SREBF1-210ENST00000471445 SH2D4AQ9H788 454 aa25.09■■□□□ 1.61
SREBF1-210ENST00000471445 STAP2Q9UGK3 403 aa25.09■■□□□ 1.61
SREBF1-210ENST00000471445 ZNF236Q9UL36 1845 aa25.09■■□□□ 1.61
SREBF1-210ENST00000471445 COL11A1P12107 1806 aaPredicted RBP25.08■■□□□ 1.61
SREBF1-210ENST00000471445 HMGCRP04035 888 aa25.08■■□□□ 1.61
SREBF1-210ENST00000471445 GPR142Q7Z601 462 aa25.08■■□□□ 1.61
SREBF1-210ENST00000471445 NUDT12Q9BQG2 462 aa25.08■■□□□ 1.61
SREBF1-210ENST00000471445 VCPKMTQ9H867 229 aa25.08■■□□□ 1.61
SREBF1-210ENST00000471445 TDO2P48775 406 aa25.07■■□□□ 1.6
SREBF1-210ENST00000471445 PDE1AP54750 535 aa25.07■■□□□ 1.6
SREBF1-210ENST00000471445 SMC5Q8IY18 1101 aa25.07■■□□□ 1.6
SREBF1-210ENST00000471445 U2AF1L4Q8WU68 220 aaKnown RBP25.07■■□□□ 1.6
SREBF1-210ENST00000471445 PAK6Q9NQU5 681 aaPredicted RBP25.07■■□□□ 1.6
SREBF1-210ENST00000471445 BTBD7Q9P203 1132 aa25.07■■□□□ 1.6
SREBF1-210ENST00000471445 RASA1P20936 1047 aa25.06■■□□□ 1.6
SREBF1-210ENST00000471445 CCNA1P78396 465 aa25.06■■□□□ 1.6
SREBF1-210ENST00000471445 TRIB2Q92519 343 aa25.06■■□□□ 1.6
SREBF1-210ENST00000471445 USP6NLQ92738 828 aa25.06■■□□□ 1.6
SREBF1-210ENST00000471445 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.06■■□□□ 1.6
SREBF1-210ENST00000471445 TANGO6Q9C0B7 1094 aa25.06■■□□□ 1.6
SREBF1-210ENST00000471445 KANSL2Q9H9L4 492 aa25.06■■□□□ 1.6
SREBF1-210ENST00000471445 MINDY4BA8MYZ0 360 aa25.05■■□□□ 1.6
SREBF1-210ENST00000471445 PATL2C9JE40 543 aaKnown RBP25.05■■□□□ 1.6
SREBF1-210ENST00000471445 XRCC5P13010 732 aaKnown RBP25.05■■□□□ 1.6
SREBF1-210ENST00000471445 EEF2P13639 858 aaKnown RBP25.05■■□□□ 1.6
SREBF1-210ENST00000471445 CYP2B6P20813 491 aa25.05■■□□□ 1.6
SREBF1-210ENST00000471445 MORN1Q5T089 497 aa25.05■■□□□ 1.6
SREBF1-210ENST00000471445 PLEKHH3Q7Z736 793 aa25.05■■□□□ 1.6
SREBF1-210ENST00000471445 UBE2Q1Q7Z7E8 422 aa25.05■■□□□ 1.6
SREBF1-210ENST00000471445 IFNL3Q8IZI9 196 aa25.05■■□□□ 1.6
SREBF1-210ENST00000471445 WDR46O15213 610 aaKnown RBP25.04■■□□□ 1.6
SREBF1-210ENST00000471445 SGPL1O95470 568 aa25.04■■□□□ 1.6
SREBF1-210ENST00000471445 COG2Q14746 738 aa25.04■■□□□ 1.6
SREBF1-210ENST00000471445 CCAR1Q8IX12 1150 aaKnown RBP25.04■■□□□ 1.6
SREBF1-210ENST00000471445 EXOC6Q8TAG9 804 aa25.04■■□□□ 1.6
SREBF1-210ENST00000471445 EVI5LQ96CN4 794 aa25.04■■□□□ 1.6
SREBF1-210ENST00000471445 FRMPD3Q5JV73 1810 aa25.03■■□□□ 1.6
SREBF1-210ENST00000471445 TRIM32Q13049 653 aa25.03■■□□□ 1.6
SREBF1-210ENST00000471445 SPICE1Q8N0Z3 855 aa25.03■■□□□ 1.6
SREBF1-210ENST00000471445 APBA2Q99767 749 aa25.03■■□□□ 1.6
SREBF1-210ENST00000471445 NACAP1Q9BZK3 213 aa25.03■■□□□ 1.6
SREBF1-210ENST00000471445 LNPKQ9C0E8 428 aa25.03■■□□□ 1.6
SREBF1-210ENST00000471445 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.03■■□□□ 1.6
SREBF1-210ENST00000471445 RWDD1Q9H446 243 aaPredicted RBP25.03■■□□□ 1.6
SREBF1-210ENST00000471445 APPP05067 770 aa25.02■■□□□ 1.6
SREBF1-210ENST00000471445 RGS2P41220 211 aa25.02■■□□□ 1.6
SREBF1-210ENST00000471445 STK11IPQ8N1F8 1099 aa25.02■■□□□ 1.6
SREBF1-210ENST00000471445 DEFB118Q96PH6 123 aa25.02■■□□□ 1.6
SREBF1-210ENST00000471445 MKNK2Q9HBH9 465 aa25.02■■□□□ 1.6
SREBF1-210ENST00000471445 HOXC10Q9NYD6 342 aa25.02■■□□□ 1.6
SREBF1-210ENST00000471445 PLIN4Q96Q06 1357 aa25.02■■□□□ 1.6
SREBF1-210ENST00000471445 FOXP2O15409 715 aa25.01■■□□□ 1.59
SREBF1-210ENST00000471445 CAPN2P17655 700 aa25.01■■□□□ 1.59
SREBF1-210ENST00000471445 DSG3P32926 999 aa25.01■■□□□ 1.59
SREBF1-210ENST00000471445 MAP3K21Q5TCX8 1036 aa25.01■■□□□ 1.59
SREBF1-210ENST00000471445 TRMT44Q8IYL2 757 aaKnown RBP25.01■■□□□ 1.59
SREBF1-210ENST00000471445 CRISPLD2Q9H0B8 497 aa25.01■■□□□ 1.59
SREBF1-210ENST00000471445 CWC22Q9HCG8 908 aaKnown RBP25.01■■□□□ 1.59
SREBF1-210ENST00000471445 RPTORQ8N122 1335 aa25.01■■□□□ 1.59
SREBF1-210ENST00000471445 IGKV6D-41A0A0C4DH26 115 aa25■■□□□ 1.59
SREBF1-210ENST00000471445 FLOT1O75955 427 aa25■■□□□ 1.59
SREBF1-210ENST00000471445 ZKSCAN1P17029 563 aaPredicted RBP25■■□□□ 1.59
SREBF1-210ENST00000471445 ATP2B2Q01814 1243 aa25■■□□□ 1.59
SREBF1-210ENST00000471445 MAP2K5Q13163 448 aa25■■□□□ 1.59
SREBF1-210ENST00000471445 CCDC129Q6ZRS4 1044 aa25■■□□□ 1.59
SREBF1-210ENST00000471445 MB21D1Q8N884 522 aa25■■□□□ 1.59
SREBF1-210ENST00000471445 NAPBQ9H115 298 aa25■■□□□ 1.59
SREBF1-210ENST00000471445 GOPCQ9HD26 462 aa25■■□□□ 1.59
SREBF1-210ENST00000471445 SLC15A5A6NIM6 579 aa24.99■■□□□ 1.59
SREBF1-210ENST00000471445 FARP2O94887 1054 aaPredicted RBP24.99■■□□□ 1.59
SREBF1-210ENST00000471445 IGHDP01880 384 aa24.99■■□□□ 1.59
SREBF1-210ENST00000471445 PTPREP23469 700 aa24.99■■□□□ 1.59
SREBF1-210ENST00000471445 GRB14Q14449 540 aa24.99■■□□□ 1.59
SREBF1-210ENST00000471445 ATG4CQ96DT6 458 aa24.99■■□□□ 1.59
SREBF1-210ENST00000471445 ALPK3Q96L96 1907 aa24.99■■□□□ 1.59
SREBF1-210ENST00000471445 MOV10L1Q9BXT6 1211 aaKnown RBP24.99■■□□□ 1.59
SREBF1-210ENST00000471445 SPATC1LQ9H0A9 340 aa24.99■■□□□ 1.59
SREBF1-210ENST00000471445 ZNF287Q9HBT7 754 aa24.99■■□□□ 1.59
SREBF1-210ENST00000471445 HMX1Q9NP08 348 aaPredicted RBP24.99■■□□□ 1.59
SREBF1-210ENST00000471445 NYAP2Q9P242 653 aa24.99■■□□□ 1.59
SREBF1-210ENST00000471445 PRDM1O75626 825 aa24.98■■□□□ 1.59
SREBF1-210ENST00000471445 PRKAR2AP13861 404 aaKnown RBP24.98■■□□□ 1.59
SREBF1-210ENST00000471445 PPARAQ07869 468 aa24.98■■□□□ 1.59
SREBF1-210ENST00000471445 WDR78Q5VTH9 848 aa24.98■■□□□ 1.59
SREBF1-210ENST00000471445 TICAM2Q86XR7 235 aa24.98■■□□□ 1.59
SREBF1-210ENST00000471445 SHCBP1Q8NEM2 672 aa24.98■■□□□ 1.59
SREBF1-210ENST00000471445 CCL14Q16627 93 aa24.97■■□□□ 1.59
SREBF1-210ENST00000471445 B4GALNT3Q6L9W6 998 aa24.97■■□□□ 1.59
SREBF1-210ENST00000471445 CHD1LQ86WJ1 897 aa24.97■■□□□ 1.59
SREBF1-210ENST00000471445 IVNS1ABPQ9Y6Y0 642 aa24.97■■□□□ 1.59
SREBF1-210ENST00000471445 ZNFX1Q9P2E3 1918 aaKnown RBP24.96■■□□□ 1.59
SREBF1-210ENST00000471445 HOXC6P09630 235 aa24.96■■□□□ 1.59
SREBF1-210ENST00000471445 NUCB1Q02818 461 aa24.96■■□□□ 1.59
SREBF1-210ENST00000471445 ZNF444Q8N0Y2 327 aaPredicted RBP24.96■■□□□ 1.59
SREBF1-210ENST00000471445 HELLSQ9NRZ9 838 aa24.96■■□□□ 1.59
SREBF1-210ENST00000471445 ADAMTS5Q9UNA0 930 aa24.96■■□□□ 1.59
SREBF1-210ENST00000471445 SUPT16HQ9Y5B9 1047 aaKnown RBP24.96■■□□□ 1.59
SREBF1-210ENST00000471445 PDE4BQ07343 736 aa24.95■■□□□ 1.58
SREBF1-210ENST00000471445 FAM83BQ5T0W9 1011 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms