RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ERCC3P19447 782 aa23.13■■□□□ 1.29
NCKIPSD-209ENST00000470006 COL9A1P20849 921 aa23.13■■□□□ 1.29
NCKIPSD-209ENST00000470006 COG2Q14746 738 aa23.13■■□□□ 1.29
NCKIPSD-209ENST00000470006 SNX17Q15036 470 aa23.13■■□□□ 1.29
NCKIPSD-209ENST00000470006 TJAP1Q5JTD0 557 aa23.13■■□□□ 1.29
NCKIPSD-209ENST00000470006 SPATC1LQ9H0A9 340 aa23.13■■□□□ 1.29
NCKIPSD-209ENST00000470006 MPHOSPH10O00566 681 aaKnown RBP23.12■■□□□ 1.29
NCKIPSD-209ENST00000470006 COBLO75128 1261 aa23.12■■□□□ 1.29
NCKIPSD-209ENST00000470006 SAMD1Q6SPF0 538 aaPredicted RBP23.12■■□□□ 1.29
NCKIPSD-209ENST00000470006 NCAPG2Q86XI2 1143 aa23.12■■□□□ 1.29
NCKIPSD-209ENST00000470006 EHD4Q9H223 541 aa23.12■■□□□ 1.29
NCKIPSD-209ENST00000470006 TMEM265A0A087WTH1 108 aa23.11■■□□□ 1.29
NCKIPSD-209ENST00000470006 TNFRSF10AO00220 468 aa23.11■■□□□ 1.29
NCKIPSD-209ENST00000470006 CLTBP09497 229 aa23.11■■□□□ 1.29
NCKIPSD-209ENST00000470006 FAM47AQ5JRC9 791 aa23.11■■□□□ 1.29
NCKIPSD-209ENST00000470006 CERS3Q8IU89 383 aa23.11■■□□□ 1.29
NCKIPSD-209ENST00000470006 MAGEB6Q8N7X4 407 aa23.11■■□□□ 1.29
NCKIPSD-209ENST00000470006 PQBP1O60828 265 aaKnown RBP23.1■■□□□ 1.29
NCKIPSD-209ENST00000470006 IGSF3O75054 1194 aa23.1■■□□□ 1.29
NCKIPSD-209ENST00000470006 IGHA2P01877 340 aa23.1■■□□□ 1.29
NCKIPSD-209ENST00000470006 POLR3DP05423 398 aaPredicted RBP23.1■■□□□ 1.29
NCKIPSD-209ENST00000470006 GRIN2CQ14957 1233 aa23.1■■□□□ 1.29
NCKIPSD-209ENST00000470006 SEPT2Q15019 361 aa23.1■■□□□ 1.29
NCKIPSD-209ENST00000470006 ARHGAP45Q92619 1136 aa23.1■■□□□ 1.29
NCKIPSD-209ENST00000470006 GPR108Q9NPR9 543 aa23.1■■□□□ 1.29
NCKIPSD-209ENST00000470006 XPNPEP3Q9NQH7 507 aa23.1■■□□□ 1.29
NCKIPSD-209ENST00000470006 SMCHD1A6NHR9 2005 aa23.09■■□□□ 1.29
NCKIPSD-209ENST00000470006 RARBP10826 455 aa23.09■■□□□ 1.29
NCKIPSD-209ENST00000470006 ITGB8P26012 769 aa23.09■■□□□ 1.29
NCKIPSD-209ENST00000470006 EPHB4P54760 987 aa23.09■■□□□ 1.29
NCKIPSD-209ENST00000470006 FPGSQ05932 587 aa23.09■■□□□ 1.29
NCKIPSD-209ENST00000470006 C1orf53Q5VUE5 145 aa23.09■■□□□ 1.29
NCKIPSD-209ENST00000470006 SHCBP1Q8NEM2 672 aa23.09■■□□□ 1.29
NCKIPSD-209ENST00000470006 PPM1EQ8WY54 764 aa23.09■■□□□ 1.29
NCKIPSD-209ENST00000470006 MROH8Q9H579 483 aa23.09■■□□□ 1.29
NCKIPSD-209ENST00000470006 TMEM39AQ9NV64 488 aa23.09■■□□□ 1.29
NCKIPSD-209ENST00000470006 ZNF236Q9UL36 1845 aa23.08■■□□□ 1.29
NCKIPSD-209ENST00000470006 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.08■■□□□ 1.29
NCKIPSD-209ENST00000470006 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.08■■□□□ 1.29
NCKIPSD-209ENST00000470006 DNAJB2P25686 324 aa23.08■■□□□ 1.29
NCKIPSD-209ENST00000470006 SHMT1P34896 483 aa23.08■■□□□ 1.29
NCKIPSD-209ENST00000470006 PLCD1P51178 756 aa23.08■■□□□ 1.29
NCKIPSD-209ENST00000470006 RARSP54136 660 aaKnown RBP23.08■■□□□ 1.29
NCKIPSD-209ENST00000470006 RNF180Q86T96 592 aa23.08■■□□□ 1.29
NCKIPSD-209ENST00000470006 TRMT2AQ8IZ69 625 aaKnown RBP23.08■■□□□ 1.29
NCKIPSD-209ENST00000470006 USP38Q8NB14 1042 aa23.08■■□□□ 1.29
NCKIPSD-209ENST00000470006 GUCY1A2P33402 732 aa23.07■■□□□ 1.28
NCKIPSD-209ENST00000470006 MAML3Q96JK9 1138 aa23.07■■□□□ 1.28
NCKIPSD-209ENST00000470006 ZNF512BQ96KM6 892 aaPredicted RBP23.07■■□□□ 1.28
NCKIPSD-209ENST00000470006 PHF24Q9UPV7 400 aa23.07■■□□□ 1.28
NCKIPSD-209ENST00000470006 ZNFX1Q9P2E3 1918 aaKnown RBP23.06■■□□□ 1.28
NCKIPSD-209ENST00000470006 IPO8O15397 1037 aaKnown RBP23.06■■□□□ 1.28
NCKIPSD-209ENST00000470006 SURF6O75683 361 aaKnown RBP23.06■■□□□ 1.28
NCKIPSD-209ENST00000470006 PGK1P00558 417 aa23.06■■□□□ 1.28
NCKIPSD-209ENST00000470006 FCER1AP12319 257 aa23.06■■□□□ 1.28
NCKIPSD-209ENST00000470006 MB21D1Q8N884 522 aa23.06■■□□□ 1.28
NCKIPSD-209ENST00000470006 CCDC8Q9H0W5 538 aaPredicted RBP23.06■■□□□ 1.28
NCKIPSD-209ENST00000470006 ZNF576Q9H609 170 aa23.06■■□□□ 1.28
NCKIPSD-209ENST00000470006 A0A1W2PRG0 241 aa23.05■■□□□ 1.28
NCKIPSD-209ENST00000470006 KIAA0355O15063 1070 aa23.05■■□□□ 1.28
NCKIPSD-209ENST00000470006 FLOT1O75955 427 aa23.05■■□□□ 1.28
NCKIPSD-209ENST00000470006 MAP3K12Q12852 859 aa23.05■■□□□ 1.28
NCKIPSD-209ENST00000470006 FRAT1Q92837 279 aaPredicted RBP23.05■■□□□ 1.28
NCKIPSD-209ENST00000470006 DSG3P32926 999 aa23.04■■□□□ 1.28
NCKIPSD-209ENST00000470006 CCDC129Q6ZRS4 1044 aa23.04■■□□□ 1.28
NCKIPSD-209ENST00000470006 ABRAQ8N0Z2 381 aa23.04■■□□□ 1.28
NCKIPSD-209ENST00000470006 CLUAP1Q96AJ1 413 aa23.04■■□□□ 1.28
NCKIPSD-209ENST00000470006 TIFAQ96CG3 184 aa23.04■■□□□ 1.28
NCKIPSD-209ENST00000470006 GAS2L1Q99501 681 aaPredicted RBP23.04■■□□□ 1.28
NCKIPSD-209ENST00000470006 MYO9BQ13459 2157 aa23.03■■□□□ 1.28
NCKIPSD-209ENST00000470006 A0A1W2PQ45 241 aaPredicted RBP23.03■■□□□ 1.28
NCKIPSD-209ENST00000470006 A0A1W2PQY0 241 aa23.03■■□□□ 1.28
NCKIPSD-209ENST00000470006 DCDC2CA8MYV0 355 aa23.03■■□□□ 1.28
NCKIPSD-209ENST00000470006 SPICE1Q8N0Z3 855 aa23.03■■□□□ 1.28
NCKIPSD-209ENST00000470006 ATG4CQ96DT6 458 aa23.03■■□□□ 1.28
NCKIPSD-209ENST00000470006 MMP19Q99542 508 aa23.03■■□□□ 1.28
NCKIPSD-209ENST00000470006 TLR7Q9NYK1 1049 aaKnown RBP23.03■■□□□ 1.28
NCKIPSD-209ENST00000470006 DBNLQ9UJU6 430 aaKnown RBP23.03■■□□□ 1.28
NCKIPSD-209ENST00000470006 BCAR3O75815 825 aa23.02■■□□□ 1.28
NCKIPSD-209ENST00000470006 SLC44A5Q8NCS7 719 aa23.02■■□□□ 1.28
NCKIPSD-209ENST00000470006 MCM9Q9NXL9 1143 aa23.02■■□□□ 1.28
NCKIPSD-209ENST00000470006 RAPGEFL1Q9UHV5 662 aa23.02■■□□□ 1.28
NCKIPSD-209ENST00000470006 TNNQ9UQP3 1299 aa23.02■■□□□ 1.28
NCKIPSD-209ENST00000470006 MAGEB6P1A0A0J9YX57 407 aa23.01■■□□□ 1.27
NCKIPSD-209ENST00000470006 ZNF316A6NFI3 1004 aaPredicted RBP23.01■■□□□ 1.27
NCKIPSD-209ENST00000470006 PGK2P07205 417 aa23.01■■□□□ 1.27
NCKIPSD-209ENST00000470006 TRIM27P14373 513 aa23.01■■□□□ 1.27
NCKIPSD-209ENST00000470006 ARHGEF10LQ9HCE6 1279 aa23.01■■□□□ 1.27
NCKIPSD-209ENST00000470006 STARD7Q9NQZ5 370 aa23.01■■□□□ 1.27
NCKIPSD-209ENST00000470006 NRBP1Q9UHY1 535 aa23.01■■□□□ 1.27
NCKIPSD-209ENST00000470006 SLC25A27O95847 323 aa23■■□□□ 1.27
NCKIPSD-209ENST00000470006 POLA2Q14181 598 aa23■■□□□ 1.27
NCKIPSD-209ENST00000470006 KIAA1755Q5JYT7 1200 aa23■■□□□ 1.27
NCKIPSD-209ENST00000470006 IL27Q8NEV9 243 aa23■■□□□ 1.27
NCKIPSD-209ENST00000470006 TINF2Q9BSI4 451 aa23■■□□□ 1.27
NCKIPSD-209ENST00000470006 CRNKL1Q9BZJ0 848 aaKnown RBP23■■□□□ 1.27
NCKIPSD-209ENST00000470006 ANTXR1Q9H6X2 564 aa23■■□□□ 1.27
NCKIPSD-209ENST00000470006 NAV1Q8NEY1 1877 aa23■■□□□ 1.27
NCKIPSD-209ENST00000470006 MUC3AQ02505 3323 aa23■■□□□ 1.27
NCKIPSD-209ENST00000470006 A0A0G2JMZ2 1700 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms