RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 RNGTTO60942 597 aaKnown RBP4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 AOC2O75106 756 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 APPP05067 770 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 EPHX1P07099 455 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 CHRNA4P43681 627 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 AFF1P51825 1210 aaKnown RBP4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 NEK4P51957 841 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 PMS1P54277 932 aaKnown RBP4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 ID3Q02535 119 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 FNDC3BQ53EP0 1204 aaKnown RBP4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 PRRT3Q5FWE3 981 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 YOD1Q5VVQ6 348 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 NSMFQ6X4W1 530 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 MCATQ8IVS2 390 aaKnown RBP4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 CCAR1Q8IX12 1150 aaKnown RBP4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 CCDC146Q8IYE0 955 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 ZNF507Q8TCN5 953 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 EXOC2Q96KP1 924 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 CCDC74BQ96LY2 380 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 DPH2Q9BQC3 489 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 MKRN2Q9H000 416 aaKnown RBP4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 SUCOQ9UBS9 1254 aaKnown RBP4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 TJP2Q9UDY2 1190 aa4.99□□□□□ -1.61
HMGB1P25-201ENST00000468402 LOC100289279A0A1B0GTE1 492 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 M0R082 166 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 RGS13O14921 159 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 FANCGO15287 622 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 TPD52L2O43399 206 aaKnown RBP4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 RFPL3O75679 317 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 PPM1BO75688 479 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 ITGAVP06756 1048 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 CD68P34810 354 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 GUCY2FP51841 1108 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 ZNF143P52747 638 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 PPP2R2AP63151 447 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 STRN3Q13033 797 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 SLC6A19Q695T7 634 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 LRRTM3Q86VH5 581 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 KRTAP1-3Q8IUG1 177 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 TMEM192Q8IY95 271 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 ZNF417Q8TAU3 575 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 BAHD1Q8TBE0 780 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 XAGE3Q8WTP9 111 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 ZNF512BQ96KM6 892 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 ZNF587Q96SQ5 575 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 HAUS7Q99871 368 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 WDR18Q9BV38 432 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 TARS2Q9BW92 718 aaKnown RBP4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 GBP3Q9H0R5 595 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 MYH16Q9H6N6 1097 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 ARHGEF4Q9NR80 690 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 MAGEC2Q9UBF1 373 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 NDOR1Q9UHB4 597 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 AP4E1Q9UPM8 1137 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 MAPRE3Q9UPY8 281 aa4.98□□□□□ -1.61
HMGB1P25-201ENST00000468402 CCDC194A0A1B0GVG4 234 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 PRC1O43663 620 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 ALDH1L1O75891 902 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 ALBP02768 609 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 PABPC1P11940 636 aaKnown RBP4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 ERVK-24P63145 666 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 SUMO1P63165 101 aaKnown RBP4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 GRIK5Q16478 980 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 GORABQ5T7V8 394 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 ZBTB37Q5TC79 503 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 MSL1Q68DK7 614 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 C8orf86Q6ZUL3 223 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 DMRTC2Q8IXT2 367 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 SLFN12Q8IYM2 578 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 ADCY4Q8NFM4 1077 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 KISS1RQ969F8 398 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 CLUHP3Q96NS8 147 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 LGR4Q9BXB1 951 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 NRSN2Q9GZP1 204 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 PIDD1Q9HB75 910 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 SFMBT1Q9UHJ3 866 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 STARD13Q9Y3M8 1113 aa4.97□□□□□ -1.61
HMGB1P25-201ENST00000468402 GSG1L2A8MUP6 293 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 C9IYK1 514 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 KCNQ2O43526 872 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 OPA1O60313 960 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 COBLO75128 1261 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 SDSP20132 328 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 KCNJ6P48051 423 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 DUOXA2Q1HG44 320 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 EXOSC6Q5RKV6 272 aaKnown RBP4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 NOL9Q5SY16 702 aaKnown RBP4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 NUTM2GQ5VZR2 741 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 DCAF15Q66K64 600 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 DYMQ7RTS9 669 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 PPFIBP1Q86W92 1011 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 AHI1Q8N157 1196 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 KCT2Q8NC54 265 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 GALNT11Q8NCW6 608 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 SMARCC1Q92922 1105 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 BTBD6Q96KE9 485 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 SMAD5Q99717 465 aaKnown RBP4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 MRPL4Q9BYD3 311 aaKnown RBP4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms