RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 MCM3APO60318 1980 aa14.36□□□□□ -0.11
CNOT4-208ENST00000465721 CNGA1P29973 690 aa14.36□□□□□ -0.11
CNOT4-208ENST00000465721 DSG3P32926 999 aa14.36□□□□□ -0.11
CNOT4-208ENST00000465721 USP5P45974 858 aa14.36□□□□□ -0.11
CNOT4-208ENST00000465721 ATP2B2Q01814 1243 aa14.36□□□□□ -0.11
CNOT4-208ENST00000465721 CERKLQ49MI3 558 aaPredicted RBP14.36□□□□□ -0.11
CNOT4-208ENST00000465721 MAGEB6Q8N7X4 407 aa14.36□□□□□ -0.11
CNOT4-208ENST00000465721 FAM161BQ96MY7 647 aa14.36□□□□□ -0.11
CNOT4-208ENST00000465721 RPAP3Q9H6T3 665 aaPredicted RBP14.36□□□□□ -0.11
CNOT4-208ENST00000465721 NOP58Q9Y2X3 529 aaKnown RBP14.36□□□□□ -0.11
CNOT4-208ENST00000465721 GREB1LQ9C091 1923 aaPredicted RBP14.35□□□□□ -0.11
CNOT4-208ENST00000465721 SURF6O75683 361 aaKnown RBP14.35□□□□□ -0.11
CNOT4-208ENST00000465721 PLCD1P51178 756 aa14.35□□□□□ -0.11
CNOT4-208ENST00000465721 ATP8B2P98198 1209 aa14.35□□□□□ -0.11
CNOT4-208ENST00000465721 SNX17Q15036 470 aa14.35□□□□□ -0.11
CNOT4-208ENST00000465721 OLFML2BQ68BL8 750 aa14.35□□□□□ -0.11
CNOT4-208ENST00000465721 EAF2Q96CJ1 260 aaPredicted RBP14.35□□□□□ -0.11
CNOT4-208ENST00000465721 MOV10L1Q9BXT6 1211 aaKnown RBP14.35□□□□□ -0.11
CNOT4-208ENST00000465721 CCDC8Q9H0W5 538 aaPredicted RBP14.35□□□□□ -0.11
CNOT4-208ENST00000465721 ANTXR1Q9H6X2 564 aa14.35□□□□□ -0.11
CNOT4-208ENST00000465721 C1orf115Q9H7X2 142 aa14.35□□□□□ -0.11
CNOT4-208ENST00000465721 CHD9Q3L8U1 2897 aa14.35□□□□□ -0.11
CNOT4-208ENST00000465721 ADORA2AP29274 412 aa14.34□□□□□ -0.11
CNOT4-208ENST00000465721 EVX2Q03828 476 aa14.34□□□□□ -0.11
CNOT4-208ENST00000465721 GABPAQ06546 454 aa14.34□□□□□ -0.11
CNOT4-208ENST00000465721 SEPT2Q15019 361 aa14.34□□□□□ -0.11
CNOT4-208ENST00000465721 GJC2Q5T442 439 aaPredicted RBP14.34□□□□□ -0.11
CNOT4-208ENST00000465721 ZNF697Q5TEC3 545 aa14.34□□□□□ -0.11
CNOT4-208ENST00000465721 TTC6Q86TZ1 520 aa14.34□□□□□ -0.11
CNOT4-208ENST00000465721 RIOK1Q9BRS2 568 aaKnown RBP14.34□□□□□ -0.11
CNOT4-208ENST00000465721 ATP11BQ9Y2G3 1177 aa14.34□□□□□ -0.11
CNOT4-208ENST00000465721 A0A1W2PRG0 241 aa14.33□□□□□ -0.12
CNOT4-208ENST00000465721 SHHQ15465 462 aa14.33□□□□□ -0.12
CNOT4-208ENST00000465721 C9orf50Q5SZB4 431 aa14.33□□□□□ -0.12
CNOT4-208ENST00000465721 ANO1Q5XXA6 986 aa14.33□□□□□ -0.12
CNOT4-208ENST00000465721 TMED8Q6PL24 325 aaPredicted RBP14.33□□□□□ -0.12
CNOT4-208ENST00000465721 CABP5Q9NP86 173 aa14.33□□□□□ -0.12
CNOT4-208ENST00000465721 PDLIM7Q9NR12 457 aa14.33□□□□□ -0.12
CNOT4-208ENST00000465721 PRKAG2Q9UGJ0 569 aa14.33□□□□□ -0.12
CNOT4-208ENST00000465721 KBTBD13C9JR72 458 aa14.32□□□□□ -0.12
CNOT4-208ENST00000465721 SEPT4O43236 478 aa14.32□□□□□ -0.12
CNOT4-208ENST00000465721 COBLO75128 1261 aa14.32□□□□□ -0.12
CNOT4-208ENST00000465721 MAP3K12Q12852 859 aa14.32□□□□□ -0.12
CNOT4-208ENST00000465721 TRIM60Q495X7 471 aa14.32□□□□□ -0.12
CNOT4-208ENST00000465721 KIAA1755Q5JYT7 1200 aa14.32□□□□□ -0.12
CNOT4-208ENST00000465721 ZKSCAN2Q63HK3 967 aa14.32□□□□□ -0.12
CNOT4-208ENST00000465721 SLC39A5Q6ZMH5 540 aa14.32□□□□□ -0.12
CNOT4-208ENST00000465721 SHCBP1Q8NEM2 672 aa14.32□□□□□ -0.12
CNOT4-208ENST00000465721 CDX2Q99626 313 aaPredicted RBP14.32□□□□□ -0.12
CNOT4-208ENST00000465721 SPATC1LQ9H0A9 340 aa14.32□□□□□ -0.12
CNOT4-208ENST00000465721 MYH4Q9Y623 1939 aa14.32□□□□□ -0.12
CNOT4-208ENST00000465721 GBF1Q92538 1859 aa14.31□□□□□ -0.12
CNOT4-208ENST00000465721 STRNO43815 780 aa14.31□□□□□ -0.12
CNOT4-208ENST00000465721 ERCC3P19447 782 aa14.31□□□□□ -0.12
CNOT4-208ENST00000465721 COG2Q14746 738 aa14.31□□□□□ -0.12
CNOT4-208ENST00000465721 FAM47AQ5JRC9 791 aa14.31□□□□□ -0.12
CNOT4-208ENST00000465721 DPP9Q86TI2 863 aa14.31□□□□□ -0.12
CNOT4-208ENST00000465721 ARRDC4Q8NCT1 418 aa14.31□□□□□ -0.12
CNOT4-208ENST00000465721 TANGO6Q9C0B7 1094 aa14.31□□□□□ -0.12
CNOT4-208ENST00000465721 TTYH1Q9H313 450 aaPredicted RBP14.31□□□□□ -0.12
CNOT4-208ENST00000465721 PRDM5Q9NQX1 630 aaPredicted RBP14.31□□□□□ -0.12
CNOT4-208ENST00000465721 CHD7Q9P2D1 2997 aa14.31□□□□□ -0.12
CNOT4-208ENST00000465721 ROBO3Q96MS0 1386 aa14.31□□□□□ -0.12
CNOT4-208ENST00000465721 LRRC41Q15345 812 aa14.3□□□□□ -0.12
CNOT4-208ENST00000465721 SH3RF1Q7Z6J0 888 aa14.3□□□□□ -0.12
CNOT4-208ENST00000465721 MAFAQ8NHW3 353 aaPredicted RBP14.3□□□□□ -0.12
CNOT4-208ENST00000465721 BADQ92934 168 aa14.3□□□□□ -0.12
CNOT4-208ENST00000465721 REV3LO60673 3130 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 MAGEB6P1A0A0J9YX57 407 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 TRIM43BA6NCK2 446 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 POLR3DP05423 398 aaPredicted RBP14.29□□□□□ -0.12
CNOT4-208ENST00000465721 PDE6AP16499 860 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 SMAD3P84022 425 aaKnown RBP14.29□□□□□ -0.12
CNOT4-208ENST00000465721 C1orf53Q5VUE5 145 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 CLEC10AQ8IUN9 316 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 ABRAQ8N0Z2 381 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 MB21D1Q8N884 522 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 SLC44A5Q8NCS7 719 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 TRIM43Q96BQ3 446 aaPredicted RBP14.29□□□□□ -0.12
CNOT4-208ENST00000465721 ATG4CQ96DT6 458 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 MAML3Q96JK9 1138 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 SEMA6BQ9H3T3 888 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 HOXC10Q9NYD6 342 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 BDP1A6H8Y1 2624 aa14.29□□□□□ -0.12
CNOT4-208ENST00000465721 MPHOSPH10O00566 681 aaKnown RBP14.28□□□□□ -0.12
CNOT4-208ENST00000465721 CYP2D6P10635 497 aa14.28□□□□□ -0.12
CNOT4-208ENST00000465721 RLBP1P12271 317 aa14.28□□□□□ -0.12
CNOT4-208ENST00000465721 ADCYAP1R1P41586 468 aa14.28□□□□□ -0.12
CNOT4-208ENST00000465721 PRAMEF19Q5SWL8 479 aa14.28□□□□□ -0.12
CNOT4-208ENST00000465721 CEP85Q6P2H3 762 aa14.28□□□□□ -0.12
CNOT4-208ENST00000465721 TMEM179Q6ZVK1 233 aa14.28□□□□□ -0.12
CNOT4-208ENST00000465721 AACSQ86V21 672 aa14.28□□□□□ -0.12
CNOT4-208ENST00000465721 MYLIPQ8WY64 445 aa14.28□□□□□ -0.12
CNOT4-208ENST00000465721 FERMT2Q96AC1 680 aa14.28□□□□□ -0.12
CNOT4-208ENST00000465721 CRNKL1Q9BZJ0 848 aaKnown RBP14.28□□□□□ -0.12
CNOT4-208ENST00000465721 MROH8Q9H579 483 aa14.28□□□□□ -0.12
CNOT4-208ENST00000465721 MCM9Q9NXL9 1143 aa14.28□□□□□ -0.12
CNOT4-208ENST00000465721 PHF24Q9UPV7 400 aa14.28□□□□□ -0.12
CNOT4-208ENST00000465721 EXOC6BQ9Y2D4 811 aa14.28□□□□□ -0.12
CNOT4-208ENST00000465721 TCRBV5S4A2TA0A5A2 114 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms