RNA–Protein interactions for RNA: ENST00000465559.5

FDPS-205, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-205ENST00000465559 CAP1Q01518 475 aa18.37■□□□□ 0.53
FDPS-205ENST00000465559 NECTIN1Q15223 517 aa18.37■□□□□ 0.53
FDPS-205ENST00000465559 POTEEQ6S8J3 1075 aa18.37■□□□□ 0.53
FDPS-205ENST00000465559 CATSPERGQ6ZRH7 1159 aa18.37■□□□□ 0.53
FDPS-205ENST00000465559 PNMA3Q9UL41 463 aa18.37■□□□□ 0.53
FDPS-205ENST00000465559 ZSWIM8A7E2V4 1837 aa18.37■□□□□ 0.53
FDPS-205ENST00000465559 A0A0G2JMZ2 1700 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 USP17L15C9J2P7 530 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 USP17L13C9JLJ4 530 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 USP17L11C9JVI0 530 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 USP17L18D6R9N7 530 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 USP17L22D6RA61 530 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 USP17L17D6RBQ6 530 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 USP17L19D6RCP7 530 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 USP17L20D6RJB6 530 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 NMT2O60551 498 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 FKTNO75072 461 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 USP17L24Q0WX57 530 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 RCSD1Q6JBY9 416 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 CASC1Q6TDU7 716 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 KIAA1211Q6ZU35 1233 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 CLIP2Q9UDT6 1046 aa18.36■□□□□ 0.53
FDPS-205ENST00000465559 OSBPP22059 807 aa18.35■□□□□ 0.53
FDPS-205ENST00000465559 SP3Q02447 781 aa18.35■□□□□ 0.53
FDPS-205ENST00000465559 RRP12Q5JTH9 1297 aaKnown RBP18.35■□□□□ 0.53
FDPS-205ENST00000465559 PPP4R3BQ5MIZ7 849 aa18.35■□□□□ 0.53
FDPS-205ENST00000465559 LBX2Q6XYB7 198 aa18.35■□□□□ 0.53
FDPS-205ENST00000465559 STOX1Q6ZVD7 989 aa18.35■□□□□ 0.53
FDPS-205ENST00000465559 GMCL1P1Q8NEA9 526 aa18.35■□□□□ 0.53
FDPS-205ENST00000465559 ESR2Q92731 530 aa18.35■□□□□ 0.53
FDPS-205ENST00000465559 P2RX7Q99572 595 aaKnown RBP18.35■□□□□ 0.53
FDPS-205ENST00000465559 RPAP3Q9H6T3 665 aaPredicted RBP18.35■□□□□ 0.53
FDPS-205ENST00000465559 ANO2Q9NQ90 1003 aa18.35■□□□□ 0.53
FDPS-205ENST00000465559 F5H6K3 240 aa18.34■□□□□ 0.53
FDPS-205ENST00000465559 WDR46O15213 610 aaKnown RBP18.34■□□□□ 0.53
FDPS-205ENST00000465559 HERVK_113P62684 666 aa18.34■□□□□ 0.53
FDPS-205ENST00000465559 KLRC3Q07444 240 aa18.34■□□□□ 0.53
FDPS-205ENST00000465559 COL13A1Q5TAT6 717 aaPredicted RBP18.34■□□□□ 0.53
FDPS-205ENST00000465559 KRT23Q9C075 422 aa18.34■□□□□ 0.53
FDPS-205ENST00000465559 CNNM2Q9H8M5 875 aa18.34■□□□□ 0.53
FDPS-205ENST00000465559 TOMM22Q9NS69 142 aa18.34■□□□□ 0.53
FDPS-205ENST00000465559 ZSWIM5Q9P217 1185 aa18.34■□□□□ 0.53
FDPS-205ENST00000465559 CPA4Q9UI42 421 aa18.34■□□□□ 0.53
FDPS-205ENST00000465559 COL11A1P12107 1806 aaPredicted RBP18.33■□□□□ 0.53
FDPS-205ENST00000465559 B4E1Z4 1266 aa18.33■□□□□ 0.52
FDPS-205ENST00000465559 E7EWF7 191 aa18.33■□□□□ 0.52
FDPS-205ENST00000465559 KDM4AO75164 1064 aa18.33■□□□□ 0.52
FDPS-205ENST00000465559 NDUFB10O96000 172 aa18.33■□□□□ 0.52
FDPS-205ENST00000465559 GCLCP48506 637 aaPredicted RBP18.33■□□□□ 0.52
FDPS-205ENST00000465559 IRX3P78415 501 aaPredicted RBP18.33■□□□□ 0.52
FDPS-205ENST00000465559 ATP2B2Q01814 1243 aa18.33■□□□□ 0.52
FDPS-205ENST00000465559 FAM110CQ1W6H9 321 aa18.33■□□□□ 0.52
FDPS-205ENST00000465559 SPICE1Q8N0Z3 855 aa18.33■□□□□ 0.52
FDPS-205ENST00000465559 ANKS1AQ92625 1134 aa18.33■□□□□ 0.52
FDPS-205ENST00000465559 TTC14Q96N46 770 aa18.33■□□□□ 0.52
FDPS-205ENST00000465559 GOPCQ9HD26 462 aa18.33■□□□□ 0.52
FDPS-205ENST00000465559 MORF4L1Q9UBU8 362 aa18.33■□□□□ 0.52
FDPS-205ENST00000465559 SLC27A2O14975 620 aa18.32■□□□□ 0.52
FDPS-205ENST00000465559 CTGFP29279 349 aa18.32■□□□□ 0.52
FDPS-205ENST00000465559 TSGA10IPQ3SY00 556 aa18.32■□□□□ 0.52
FDPS-205ENST00000465559 CREB3L3Q68CJ9 461 aa18.32■□□□□ 0.52
FDPS-205ENST00000465559 LRRC47Q8N1G4 583 aaKnown RBP18.32■□□□□ 0.52
FDPS-205ENST00000465559 KCNB2Q92953 911 aa18.32■□□□□ 0.52
FDPS-205ENST00000465559 RBPJLQ9UBG7 517 aa18.32■□□□□ 0.52
FDPS-205ENST00000465559 MYPNQ86TC9 1320 aa18.31■□□□□ 0.52
FDPS-205ENST00000465559 SPDYE16A6NNV3 312 aaPredicted RBP18.31■□□□□ 0.52
FDPS-205ENST00000465559 EPB41L2O43491 1005 aaKnown RBP18.31■□□□□ 0.52
FDPS-205ENST00000465559 LACTBP83111 547 aaPredicted RBP18.31■□□□□ 0.52
FDPS-205ENST00000465559 COG2Q14746 738 aa18.31■□□□□ 0.52
FDPS-205ENST00000465559 CYB5R4Q7L1T6 521 aa18.31■□□□□ 0.52
FDPS-205ENST00000465559 DGKHQ86XP1 1220 aa18.31■□□□□ 0.52
FDPS-205ENST00000465559 CD99L2Q8TCZ2 262 aa18.31■□□□□ 0.52
FDPS-205ENST00000465559 SMCR8Q8TEV9 937 aaPredicted RBP18.31■□□□□ 0.52
FDPS-205ENST00000465559 GTF3C2Q8WUA4 911 aaPredicted RBP18.31■□□□□ 0.52
FDPS-205ENST00000465559 ERO1AQ96HE7 468 aa18.31■□□□□ 0.52
FDPS-205ENST00000465559 TMEM47Q9BQJ4 181 aa18.31■□□□□ 0.52
FDPS-205ENST00000465559 TXNRD2Q9NNW7 524 aa18.31■□□□□ 0.52
FDPS-205ENST00000465559 ADAMTS5Q9UNA0 930 aa18.31■□□□□ 0.52
FDPS-205ENST00000465559 STX8Q9UNK0 236 aa18.31■□□□□ 0.52
FDPS-205ENST00000465559 CNMDO75829 334 aa18.3■□□□□ 0.52
FDPS-205ENST00000465559 TOP1P11387 765 aaKnown RBP18.3■□□□□ 0.52
FDPS-205ENST00000465559 DSG3P32926 999 aa18.3■□□□□ 0.52
FDPS-205ENST00000465559 SEC23AQ15436 765 aa18.3■□□□□ 0.52
FDPS-205ENST00000465559 MB21D2Q8IYB1 491 aaPredicted RBP18.3■□□□□ 0.52
FDPS-205ENST00000465559 ANKRD13CQ8N6S4 541 aa18.3■□□□□ 0.52
FDPS-205ENST00000465559 GMCL1Q96IK5 515 aa18.3■□□□□ 0.52
FDPS-205ENST00000465559 HTTP42858 3142 aa18.29■□□□□ 0.52
FDPS-205ENST00000465559 COL9A3Q14050 684 aaPredicted RBP18.29■□□□□ 0.52
FDPS-205ENST00000465559 CCDC178Q5BJE1 867 aa18.29■□□□□ 0.52
FDPS-205ENST00000465559 FAM83BQ5T0W9 1011 aa18.29■□□□□ 0.52
FDPS-205ENST00000465559 SLFN13Q68D06 897 aa18.29■□□□□ 0.52
FDPS-205ENST00000465559 CTU1Q7Z7A3 348 aaKnown RBP18.29■□□□□ 0.52
FDPS-205ENST00000465559 IQCA1Q86XH1 822 aa18.29■□□□□ 0.52
FDPS-205ENST00000465559 ENAHQ8N8S7 591 aaPredicted RBP18.29■□□□□ 0.52
FDPS-205ENST00000465559 NCOA7Q8NI08 942 aa18.29■□□□□ 0.52
FDPS-205ENST00000465559 ZSCAN10Q96SZ4 725 aaPredicted RBP18.29■□□□□ 0.52
FDPS-205ENST00000465559 ZKSCAN3Q9BRR0 538 aa18.29■□□□□ 0.52
FDPS-205ENST00000465559 ARHGAP39Q9C0H5 1083 aa18.29■□□□□ 0.52
FDPS-205ENST00000465559 HOXC10Q9NYD6 342 aa18.29■□□□□ 0.52
FDPS-205ENST00000465559 RABGAP1Q9Y3P9 1069 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms